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The map label for this gene is slyA [C]

Identifier: 83592777

GI number: 83592777

Start: 1705410

End: 1705853

Strand: Reverse

Name: slyA [C]

Synonym: Rru_A1441

Alternate gene names: 83592777

Gene position: 1705853-1705410 (Counterclockwise)

Preceding gene: 83592779

Following gene: 83592772

Centisome position: 39.19

GC content: 65.32

Gene sequence:

>444_bases
ATGTCGCTGAACCGTCTCCACTCCGCCGGCTATATGACGAACTGGGCCGCCCGCCTCTTCGCTCTGGCGATCGAACAGCG
CTTGAAGCCGCATGGCATCGCTCCGGCCTATCTGCCGGTTTTCTTCGCCCTTGGCCCTGGCAAGCCCTTGTCGCAAAAGG
CCCTGGCCGCGCTAGCGGCGGTAGAGCAGCCGACGATGGCGGCGACTCTCAACCGAATGGAGCGCGACGGCCTGATCGAG
CGTACCCCCGATCCCGCCGATCGCCGCAGCTCGCTCATCTCTCTGAGCGAGCTGGCGTCGGGCAAGCTGGAGGTCGTGCG
TCAAGCCACCGCCGACATCAACGCCCGCGCCCTCTCCTCGCTTACCGAAGCCGAATGCGCCACCTTCTTGACGATGCTGG
AGAAAATCATCGAGCGGCTCGACCCGCGCGGCCGAGGACAATGA

Upstream 100 bases:

>100_bases
AGACGGTGAAGGGGTGAACGATGGGACATGACAGCGTGACTCCCTCAAGTTACATAGCGTACTATATATCACCCTTCCAC
AACTAGATAGCAAGCTATAT

Downstream 100 bases:

>100_bases
GGGGGATTTACCCACCTTCGTCGCGGGCGCCCGCAACTGCGCCGGCCCCGTCCTGGCCCCCTACGCCGGGGCCCGAACGG
GGCTTGGCCGAGGCGATTAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family; MarR Family Transcriptional Regulator Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSLNRLHSAGYMTNWAARLFALAIEQRLKPHGIAPAYLPVFFALGPGKPLSQKALAALAAVEQPTMAATLNRMERDGLIE
RTPDPADRRSSLISLSELASGKLEVVRQATADINARALSSLTEAECATFLTMLEKIIERLDPRGRGQ

Sequences:

>Translated_147_residues
MSLNRLHSAGYMTNWAARLFALAIEQRLKPHGIAPAYLPVFFALGPGKPLSQKALAALAAVEQPTMAATLNRMERDGLIE
RTPDPADRRSSLISLSELASGKLEVVRQATADINARALSSLTEAECATFLTMLEKIIERLDPRGRGQ
>Mature_146_residues
SLNRLHSAGYMTNWAARLFALAIEQRLKPHGIAPAYLPVFFALGPGKPLSQKALAALAAVEQPTMAATLNRMERDGLIER
TPDPADRRSSLISLSELASGKLEVVRQATADINARALSSLTEAECATFLTMLEKIIERLDPRGRGQ

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15998; Mature: 15867

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNRLHSAGYMTNWAARLFALAIEQRLKPHGIAPAYLPVFFALGPGKPLSQKALAALAA
CCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
VEQPTMAATLNRMERDGLIERTPDPADRRSSLISLSELASGKLEVVRQATADINARALSS
HCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LTEAECATFLTMLEKIIERLDPRGRGQ
HHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLNRLHSAGYMTNWAARLFALAIEQRLKPHGIAPAYLPVFFALGPGKPLSQKALAALAA
CCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
VEQPTMAATLNRMERDGLIERTPDPADRRSSLISLSELASGKLEVVRQATADINARALSS
HCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LTEAECATFLTMLEKIIERLDPRGRGQ
HHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA