| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592712
Identifier: 83592712
GI number: 83592712
Start: 1620088
End: 1622358
Strand: Reverse
Name: 83592712
Synonym: Rru_A1376
Alternate gene names: NA
Gene position: 1622358-1620088 (Counterclockwise)
Preceding gene: 83592713
Following gene: 83592711
Centisome position: 37.27
GC content: 63.41
Gene sequence:
>2271_bases ATGATCTATTTCGAGAACTATCTTTTCGAAGAAGGGCTGATGATCGTCGGCGATCACCAGGATAAAACCCTGTTCTATTT CTTTCCGGTGGCGCCCCGTCTCGCCCTGCATCCCGATGGCCTGCCGGCCTTCCTGTTCCTGAAATACGCCGATGATCCCC AGTCCCTGCCGCCCGGCGTCGAAGGCGGCGGCGGCTTCCTGGCCTTTGATTGCGATCTGCGGGTCGATGCCGATCGTTTG AGCGACGCCGCCAAAGCGGTGAAGAAAAAGCGCGATCTTGATCAGACGCCGCGCTTGGTGCCCATCGATTACCGCCGCGG CGGCGTGCGGCTGATGATCCTTGACCTCGATACCAGCCCGCCGCCGCCGCCAGCCCCCGCCGATGGCAGCCTGCCGGTGA AATCCTCGATCGTCGCCCCGCCCGGCCAGCGCTTCGTCGAACGCGCCAGCTTCTCGGCGACGCCCTCGCTGTTTGGCGAC AACCGCGCCACCTTCAATGTCGAACTGTCCAAGCGCGGCGCCACCCTGGTCGAGGAAACCCTCGACATGGCCTCCTCGCT GGTCGGCATCGTCTATGACCTGACCTTCGTCGGCCTGAAGCCCGGCTTCAACGTGACGCTGAAGGTCGATTGGAAACGGG TTCAGCACGATATCGACGAACGTTTCCAGGCCAGCTTCCTGTTCGCCTCGGTCGATATCGAAAGCTTCGTCAGCGAATTG ATCGACAACCGGGTGATCGAATTCGAAGTCGTGCGCTTCGCCGCCGGATCGGATGACGCGGCGCTGAACGATCGCACCGA CGAGGCGGCGCAATTCGTCAAGGAGATGATCACCGACACCTTCTTCGAGCCCTCGCTCAACCCAAGCGGGGCGATCTCGG ACCGCTGGTGGGAACAGGTCGGCAGCTTCGCCAAATCGATGAGGCCGACCTTCGCCGGCTATACCAAACGCGACATGACG CGCATCGACACCAAATCCCTGGATGTGTCGTTCCGCGAAATTACCGCCGTCGAGCGCCGCATCCTGCCCCAGGGCCATCT GCAGGGGTTGGCCGGGGTTCTGGCCGGTCATCCGAGGGATCTGTTCATCCGCAGCGTCCGCCTGGATGACGATTTCTTCA AGACCGTGGCGGTCGAGGTGACGGTCGGCGGCAGTTTCGAGGCGCTGGGGTTCACCGGCGCCACCATCGCCTTTGACTAT GCGGGCGATGCCAAGGCCCTGACCTTCGACAAGCCCAACGCACCGCAAAGCGTCAAATGGTTCTTCGATCCGCCCTCGGG GCGCAGCTATCGCTACCGCGTTGAGTTCTTCCCCGGCCCCGATATGCCCGACGGCCTGGAGAGCGGCTTCACAAGCGACT GGTTGGTCAGCAACGAAACCCGCATCACCCTTGACCCCATCCGCTTCTTCCAGCCCGCCACCGTCGGCTTCCGCCTGCTC GATGACGAGGTGCTTACGCGCTTTCCCACCATCGAGATCGAGGCCAGTCACGAAAACCCGGCCGGCGGCCCGGCGCGGCG CAAAACCCTGATGCTGCGCCCCGATCAAAAGACCCCCTCCTGGCGCTTCCTGCCCTTCACCCCGGGGGAGGCCGAGGTCA CCACGCGGCTGCGTTTCCTGCGCGCCAACGGCACCGGCCTGGAGATCGGCCCGCTGGTCAGCCGCTCCGATACCGTGCTG ATCGCCGATCCCCAACCGCTGCGTCTGGAAGTCGAAATCATCCCCTCGGTCGATTGGACAAGCTTGCGTCAGATCATCGT CGATTTGCGCTATGAGGACGCCGAGAACGGCCTGCGCCATGCGGGCAAGGCGACCTTCACCGAGAAAACCGACGTCAGCA GCGCCTGGGTCATCCCGATCGCCGATGCCGACAAGCGCCATTACTCCTACCGCGTCACCTTCCTGGCCAAGACCGGCGCC GTCCGCCAATGGCCCTTCGTCTCGACCGACGATGAACGCGTCTTCGTCACCGAGGATTTCCTGCGCGAGACCATCGTTGC CGTCTCCTCGCGTGGCAAATCCTTTGACGAGGCCGGGATCGCCCGCATCGAGGTTCAGTTCCAATACGATCCCGGCGCCG GCCAACCCGTCGTCACCCAGGACAACACCCTGTCAAGCCGCGACGCCACCGGCGAATTCCGCTTCACCCAGACCGATCCC GCCCGCCCGCGCTATCGCTATGGCGTGACCTTCGTCGGCACCGATGGCTCGCGCCGCTTCGAGCCAGACCGCGAGTCCGA TAGCACCAAACTGGTTTTTTCGATCGTTTGA
Upstream 100 bases:
>100_bases AGGCGGACTACGCCCTGAAAGGACAGAACACAAAAAAGATAGATGGTCCGCGCACGACAGAAGACGAGATGATCATTCTT GAAATTCCGGTGTAAGCGCC
Downstream 100 bases:
>100_bases TCCCCCTGTTCGCCGTGGGAGACACGCCATGCTGCTGTTGAAGCCGCTTTTCACGGTCAACAAGGTCACGGTCTTCCCCG ACCATGCCGATAAGGACACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MIYFENYLFEEGLMIVGDHQDKTLFYFFPVAPRLALHPDGLPAFLFLKYADDPQSLPPGVEGGGGFLAFDCDLRVDADRL SDAAKAVKKKRDLDQTPRLVPIDYRRGGVRLMILDLDTSPPPPPAPADGSLPVKSSIVAPPGQRFVERASFSATPSLFGD NRATFNVELSKRGATLVEETLDMASSLVGIVYDLTFVGLKPGFNVTLKVDWKRVQHDIDERFQASFLFASVDIESFVSEL IDNRVIEFEVVRFAAGSDDAALNDRTDEAAQFVKEMITDTFFEPSLNPSGAISDRWWEQVGSFAKSMRPTFAGYTKRDMT RIDTKSLDVSFREITAVERRILPQGHLQGLAGVLAGHPRDLFIRSVRLDDDFFKTVAVEVTVGGSFEALGFTGATIAFDY AGDAKALTFDKPNAPQSVKWFFDPPSGRSYRYRVEFFPGPDMPDGLESGFTSDWLVSNETRITLDPIRFFQPATVGFRLL DDEVLTRFPTIEIEASHENPAGGPARRKTLMLRPDQKTPSWRFLPFTPGEAEVTTRLRFLRANGTGLEIGPLVSRSDTVL IADPQPLRLEVEIIPSVDWTSLRQIIVDLRYEDAENGLRHAGKATFTEKTDVSSAWVIPIADADKRHYSYRVTFLAKTGA VRQWPFVSTDDERVFVTEDFLRETIVAVSSRGKSFDEAGIARIEVQFQYDPGAGQPVVTQDNTLSSRDATGEFRFTQTDP ARPRYRYGVTFVGTDGSRRFEPDRESDSTKLVFSIV
Sequences:
>Translated_756_residues MIYFENYLFEEGLMIVGDHQDKTLFYFFPVAPRLALHPDGLPAFLFLKYADDPQSLPPGVEGGGGFLAFDCDLRVDADRL SDAAKAVKKKRDLDQTPRLVPIDYRRGGVRLMILDLDTSPPPPPAPADGSLPVKSSIVAPPGQRFVERASFSATPSLFGD NRATFNVELSKRGATLVEETLDMASSLVGIVYDLTFVGLKPGFNVTLKVDWKRVQHDIDERFQASFLFASVDIESFVSEL IDNRVIEFEVVRFAAGSDDAALNDRTDEAAQFVKEMITDTFFEPSLNPSGAISDRWWEQVGSFAKSMRPTFAGYTKRDMT RIDTKSLDVSFREITAVERRILPQGHLQGLAGVLAGHPRDLFIRSVRLDDDFFKTVAVEVTVGGSFEALGFTGATIAFDY AGDAKALTFDKPNAPQSVKWFFDPPSGRSYRYRVEFFPGPDMPDGLESGFTSDWLVSNETRITLDPIRFFQPATVGFRLL DDEVLTRFPTIEIEASHENPAGGPARRKTLMLRPDQKTPSWRFLPFTPGEAEVTTRLRFLRANGTGLEIGPLVSRSDTVL IADPQPLRLEVEIIPSVDWTSLRQIIVDLRYEDAENGLRHAGKATFTEKTDVSSAWVIPIADADKRHYSYRVTFLAKTGA VRQWPFVSTDDERVFVTEDFLRETIVAVSSRGKSFDEAGIARIEVQFQYDPGAGQPVVTQDNTLSSRDATGEFRFTQTDP ARPRYRYGVTFVGTDGSRRFEPDRESDSTKLVFSIV >Mature_756_residues MIYFENYLFEEGLMIVGDHQDKTLFYFFPVAPRLALHPDGLPAFLFLKYADDPQSLPPGVEGGGGFLAFDCDLRVDADRL SDAAKAVKKKRDLDQTPRLVPIDYRRGGVRLMILDLDTSPPPPPAPADGSLPVKSSIVAPPGQRFVERASFSATPSLFGD NRATFNVELSKRGATLVEETLDMASSLVGIVYDLTFVGLKPGFNVTLKVDWKRVQHDIDERFQASFLFASVDIESFVSEL IDNRVIEFEVVRFAAGSDDAALNDRTDEAAQFVKEMITDTFFEPSLNPSGAISDRWWEQVGSFAKSMRPTFAGYTKRDMT RIDTKSLDVSFREITAVERRILPQGHLQGLAGVLAGHPRDLFIRSVRLDDDFFKTVAVEVTVGGSFEALGFTGATIAFDY AGDAKALTFDKPNAPQSVKWFFDPPSGRSYRYRVEFFPGPDMPDGLESGFTSDWLVSNETRITLDPIRFFQPATVGFRLL DDEVLTRFPTIEIEASHENPAGGPARRKTLMLRPDQKTPSWRFLPFTPGEAEVTTRLRFLRANGTGLEIGPLVSRSDTVL IADPQPLRLEVEIIPSVDWTSLRQIIVDLRYEDAENGLRHAGKATFTEKTDVSSAWVIPIADADKRHYSYRVTFLAKTGA VRQWPFVSTDDERVFVTEDFLRETIVAVSSRGKSFDEAGIARIEVQFQYDPGAGQPVVTQDNTLSSRDATGEFRFTQTDP ARPRYRYGVTFVGTDGSRRFEPDRESDSTKLVFSIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84455; Mature: 84455
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYFENYLFEEGLMIVGDHQDKTLFYFFPVAPRLALHPDGLPAFLFLKYADDPQSLPPGV CEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCCCC EGGGGFLAFDCDLRVDADRLSDAAKAVKKKRDLDQTPRLVPIDYRRGGVRLMILDLDTSP CCCCEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCC PPPPAPADGSLPVKSSIVAPPGQRFVERASFSATPSLFGDNRATFNVELSKRGATLVEET CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH LDMASSLVGIVYDLTFVGLKPGFNVTLKVDWKRVQHDIDERFQASFLFASVDIESFVSEL HHHHHHHHHHHHEEEEEEECCCCEEEEEEEHHHHHHHHHHHHEEEEEEEECCHHHHHHHH IDNRVIEFEVVRFAAGSDDAALNDRTDEAAQFVKEMITDTFFEPSLNPSGAISDRWWEQV HCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH GSFAKSMRPTFAGYTKRDMTRIDTKSLDVSFREITAVERRILPQGHLQGLAGVLAGHPRD HHHHHHCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH LFIRSVRLDDDFFKTVAVEVTVGGSFEALGFTGATIAFDYAGDAKALTFDKPNAPQSVKW HEEEEEECCCHHEEEEEEEEEECCCEEECCCCCEEEEEEECCCCEEEEECCCCCCCCEEE FFDPPSGRSYRYRVEFFPGPDMPDGLESGFTSDWLVSNETRITLDPIRFFQPATVGFRLL EECCCCCCCEEEEEEEECCCCCCCHHHCCCCCCEEECCCCEEEECHHHHCCCCCCCEEEE DDEVLTRFPTIEIEASHENPAGGPARRKTLMLRPDQKTPSWRFLPFTPGEAEVTTRLRFL CHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHEEEEEEE RANGTGLEIGPLVSRSDTVLIADPQPLRLEVEIIPSVDWTSLRQIIVDLRYEDAENGLRH EECCCCEEECCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH AGKATFTEKTDVSSAWVIPIADADKRHYSYRVTFLAKTGAVRQWPFVSTDDERVFVTEDF CCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCEECCCCCCCCCEEEEEHHH LRETIVAVSSRGKSFDEAGIARIEVQFQYDPGAGQPVVTQDNTLSSRDATGEFRFTQTDP HHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEECCCC ARPRYRYGVTFVGTDGSRRFEPDRESDSTKLVFSIV CCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MIYFENYLFEEGLMIVGDHQDKTLFYFFPVAPRLALHPDGLPAFLFLKYADDPQSLPPGV CEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCCCC EGGGGFLAFDCDLRVDADRLSDAAKAVKKKRDLDQTPRLVPIDYRRGGVRLMILDLDTSP CCCCEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCC PPPPAPADGSLPVKSSIVAPPGQRFVERASFSATPSLFGDNRATFNVELSKRGATLVEET CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH LDMASSLVGIVYDLTFVGLKPGFNVTLKVDWKRVQHDIDERFQASFLFASVDIESFVSEL HHHHHHHHHHHHEEEEEEECCCCEEEEEEEHHHHHHHHHHHHEEEEEEEECCHHHHHHHH IDNRVIEFEVVRFAAGSDDAALNDRTDEAAQFVKEMITDTFFEPSLNPSGAISDRWWEQV HCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH GSFAKSMRPTFAGYTKRDMTRIDTKSLDVSFREITAVERRILPQGHLQGLAGVLAGHPRD HHHHHHCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH LFIRSVRLDDDFFKTVAVEVTVGGSFEALGFTGATIAFDYAGDAKALTFDKPNAPQSVKW HEEEEEECCCHHEEEEEEEEEECCCEEECCCCCEEEEEEECCCCEEEEECCCCCCCCEEE FFDPPSGRSYRYRVEFFPGPDMPDGLESGFTSDWLVSNETRITLDPIRFFQPATVGFRLL EECCCCCCCEEEEEEEECCCCCCCHHHCCCCCCEEECCCCEEEECHHHHCCCCCCCEEEE DDEVLTRFPTIEIEASHENPAGGPARRKTLMLRPDQKTPSWRFLPFTPGEAEVTTRLRFL CHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHEEEEEEE RANGTGLEIGPLVSRSDTVLIADPQPLRLEVEIIPSVDWTSLRQIIVDLRYEDAENGLRH EECCCCEEECCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH AGKATFTEKTDVSSAWVIPIADADKRHYSYRVTFLAKTGAVRQWPFVSTDDERVFVTEDF CCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCEECCCCCCCCCEEEEEHHH LRETIVAVSSRGKSFDEAGIARIEVQFQYDPGAGQPVVTQDNTLSSRDATGEFRFTQTDP HHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEECCCC ARPRYRYGVTFVGTDGSRRFEPDRESDSTKLVFSIV CCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA