| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592713
Identifier: 83592713
GI number: 83592713
Start: 1622364
End: 1624544
Strand: Reverse
Name: 83592713
Synonym: Rru_A1377
Alternate gene names: NA
Gene position: 1624544-1622364 (Counterclockwise)
Preceding gene: 83592714
Following gene: 83592712
Centisome position: 37.32
GC content: 59.42
Gene sequence:
>2181_bases ATGCTGATAATTCCACCCCATGACCGCATAGACGATATCACCATCTATAAGGACAGCGACGATCCTTGGATGTTCTATGC TATCGCCAATATCCCGCGTTTACGGCTGGGGCCCGATGGCAAGCCGGTTTTCACTTTTCTGAAATATGCCGAAGTCGATC CCGGCCCCGATGGCAAGGGCGTCTCCGGCGGGTATGTGCAGTTCGACACCGCGTTCGGCCTGACATCCGATCAGGCGGCT CGGGTTCGCGGCGTTCTGCAAGAGCGCGCCGACAAGGCCGCCCGCGACCAGGGCCTGCCCAATCAACCGGTGCGTCTTGG CGATCCGACCTGGACCGAGGGTTCGATCGCGCTGGTCACCTTTCAGGAAGGCACCGGCATCGTCGATAAGGTGATGGGCG GCGGCACGCCGTCGCTGCTCGGCGACAACATCGCCGTCAGCGCCCTTCAACTTAGCGAAGCCGGCGCCCAATTGTTCTGG GCGGCCTGCCAGATGCCAACGATGCCGATCGGCATCGTCATGAAGATGAAATTCCTCGCCCGCATCCCCTCGATCGAGAT GCATGTCTGGCTGCAGAGCGAAAACTTCGCCAGCTACTATGAGAAGATCGATCGCGACGAGCCGTTCTGGGGCGACGACA CCGTCACCCAAACCCGCCGCGAAGACTTTCGCCGCACCAATTCGGGCGATGTCAATGTGGTGCGCTGGCCCGATTTCAGC GCCGATCCGAGCTCGGAAAAGAAATTCAAGGACGAGATCGTTGAATGGGGCTGGTCGCTGCTGCAAGACCATTTCAAGGC GGCCCTGGCCGATGTCATCCCCCCCTTCACCGAACGCGGCGAGATCGACGGCATCGAGCATGTCGAGCGCTCCCTGATCG TCAGCAAGGTCTCCGACCTTGATGTGTACTTCAAGCAAGACAGCATCATCCCCTGGTCGATCAATCCCCAGGCGACCTTG CAAAGCGCCTTGGCCGCCGGCGGCGGGCGCTTCCCCAAGGAGGATTTCTTCAAGGAGATCCCGCTCAACGACGCCTTCTT CAAGCGGCTGTCGGTCAAGGTCGATTGTAACGCCAGTTGGTCGGAAGGGATTATTCATTCGGTCGTCGTCACGCTGCGAT ACGCCGACAAGATCGAAAGCTTCACTTTCCAGAAGGACGAGGACACCTTCTTCTTTCGCCGGCTGATCGACCCGGCCCTG GGGCGGACATACCGCTATGACGCGGTCATCCACTTCAAGGCCAGCACCCGCACCCTCACCATTCCCGAGACCGAAACCGA CAAAGCCGCCCTGGTCATCCCGGTCTCGCGTCTGGCCGGCCTCGCCGTGACCGTTCTGGCCGGCGATATCGATTGGGAAA AAACCGTGCAGCAGGTGCAGGTCGCCCTGTCCTATGAGGACGCGGCCAACGGCGTGGCCGAGCGGACGACGACGCTGCTG CTGGCCGCCGACAGCAAATCCCAGGTCTGGAAAGAACAGATCCTGGCGGCGGTGACCAAGCCCTATCGCTATACGCCGAC CTATGTTCTGAAATCGGGCCGCACCCTTGCCCGGCCCACCGCGCAATCGACCAACGACACCTTGATCATCAATGATGTCT TTGGCGAGCGCATCAATCTCACCTTCGTTCCGGCGGGCAGCTTCACCCGCATGGCCGGCATCTTCGTCGAGGTCGATTAT CAGGACGCCGCCAACGACCACCGCGTCAAACAAACGGTTCAGTTGCTCAGCGAAAAGGACAGCCCCGTCGTCTCCATTCC GCGCTGGGACAACGGTCCGACCAAATTCCGCTACCGCTTCCGGGTCTCCTATAAGGATGGCCGCCTTCAGGAGGTCGACT GGAAAGACGGCGACGGCTCGTCGAGCTTGGCCGTTGGCGAATTGTTCGAGGAAACCGTCGAGATCACGATCAAGGCCGAT CTGCTTGACTGGAGCCTGCTGCGCTTCGTGTTGTGCAAGCTTGATTATAGCGACGACGCGGCCAATTACCGCGTCCGCGA CGACTTCGTTTTCACCCCCACCCAATCGGCCGACAAACTCTGGTCTTTGAATCTGAAGGACAGAAAAAAACGCGCCTATT CCTTTCAGGCGGACTACGCCCTGAAAGGACAGAACACAAAAAAGATAGATGGTCCGCGCACGACAGAAGACGAGATGATC ATTCTTGAAATTCCGGTGTAA
Upstream 100 bases:
>100_bases CGGCGCGATACAACCCAAAGAATGCATTTGACAGACTGCATTTTATATTTTTTCTTAGGTGGCAAGGGATCTATCAATCG ATTTCGGTGGGGAACAGTTC
Downstream 100 bases:
>100_bases GCGCCATGATCTATTTCGAGAACTATCTTTTCGAAGAAGGGCTGATGATCGTCGGCGATCACCAGGATAAAACCCTGTTC TATTTCTTTCCGGTGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MLIIPPHDRIDDITIYKDSDDPWMFYAIANIPRLRLGPDGKPVFTFLKYAEVDPGPDGKGVSGGYVQFDTAFGLTSDQAA RVRGVLQERADKAARDQGLPNQPVRLGDPTWTEGSIALVTFQEGTGIVDKVMGGGTPSLLGDNIAVSALQLSEAGAQLFW AACQMPTMPIGIVMKMKFLARIPSIEMHVWLQSENFASYYEKIDRDEPFWGDDTVTQTRREDFRRTNSGDVNVVRWPDFS ADPSSEKKFKDEIVEWGWSLLQDHFKAALADVIPPFTERGEIDGIEHVERSLIVSKVSDLDVYFKQDSIIPWSINPQATL QSALAAGGGRFPKEDFFKEIPLNDAFFKRLSVKVDCNASWSEGIIHSVVVTLRYADKIESFTFQKDEDTFFFRRLIDPAL GRTYRYDAVIHFKASTRTLTIPETETDKAALVIPVSRLAGLAVTVLAGDIDWEKTVQQVQVALSYEDAANGVAERTTTLL LAADSKSQVWKEQILAAVTKPYRYTPTYVLKSGRTLARPTAQSTNDTLIINDVFGERINLTFVPAGSFTRMAGIFVEVDY QDAANDHRVKQTVQLLSEKDSPVVSIPRWDNGPTKFRYRFRVSYKDGRLQEVDWKDGDGSSSLAVGELFEETVEITIKAD LLDWSLLRFVLCKLDYSDDAANYRVRDDFVFTPTQSADKLWSLNLKDRKKRAYSFQADYALKGQNTKKIDGPRTTEDEMI ILEIPV
Sequences:
>Translated_726_residues MLIIPPHDRIDDITIYKDSDDPWMFYAIANIPRLRLGPDGKPVFTFLKYAEVDPGPDGKGVSGGYVQFDTAFGLTSDQAA RVRGVLQERADKAARDQGLPNQPVRLGDPTWTEGSIALVTFQEGTGIVDKVMGGGTPSLLGDNIAVSALQLSEAGAQLFW AACQMPTMPIGIVMKMKFLARIPSIEMHVWLQSENFASYYEKIDRDEPFWGDDTVTQTRREDFRRTNSGDVNVVRWPDFS ADPSSEKKFKDEIVEWGWSLLQDHFKAALADVIPPFTERGEIDGIEHVERSLIVSKVSDLDVYFKQDSIIPWSINPQATL QSALAAGGGRFPKEDFFKEIPLNDAFFKRLSVKVDCNASWSEGIIHSVVVTLRYADKIESFTFQKDEDTFFFRRLIDPAL GRTYRYDAVIHFKASTRTLTIPETETDKAALVIPVSRLAGLAVTVLAGDIDWEKTVQQVQVALSYEDAANGVAERTTTLL LAADSKSQVWKEQILAAVTKPYRYTPTYVLKSGRTLARPTAQSTNDTLIINDVFGERINLTFVPAGSFTRMAGIFVEVDY QDAANDHRVKQTVQLLSEKDSPVVSIPRWDNGPTKFRYRFRVSYKDGRLQEVDWKDGDGSSSLAVGELFEETVEITIKAD LLDWSLLRFVLCKLDYSDDAANYRVRDDFVFTPTQSADKLWSLNLKDRKKRAYSFQADYALKGQNTKKIDGPRTTEDEMI ILEIPV >Mature_726_residues MLIIPPHDRIDDITIYKDSDDPWMFYAIANIPRLRLGPDGKPVFTFLKYAEVDPGPDGKGVSGGYVQFDTAFGLTSDQAA RVRGVLQERADKAARDQGLPNQPVRLGDPTWTEGSIALVTFQEGTGIVDKVMGGGTPSLLGDNIAVSALQLSEAGAQLFW AACQMPTMPIGIVMKMKFLARIPSIEMHVWLQSENFASYYEKIDRDEPFWGDDTVTQTRREDFRRTNSGDVNVVRWPDFS ADPSSEKKFKDEIVEWGWSLLQDHFKAALADVIPPFTERGEIDGIEHVERSLIVSKVSDLDVYFKQDSIIPWSINPQATL QSALAAGGGRFPKEDFFKEIPLNDAFFKRLSVKVDCNASWSEGIIHSVVVTLRYADKIESFTFQKDEDTFFFRRLIDPAL GRTYRYDAVIHFKASTRTLTIPETETDKAALVIPVSRLAGLAVTVLAGDIDWEKTVQQVQVALSYEDAANGVAERTTTLL LAADSKSQVWKEQILAAVTKPYRYTPTYVLKSGRTLARPTAQSTNDTLIINDVFGERINLTFVPAGSFTRMAGIFVEVDY QDAANDHRVKQTVQLLSEKDSPVVSIPRWDNGPTKFRYRFRVSYKDGRLQEVDWKDGDGSSSLAVGELFEETVEITIKAD LLDWSLLRFVLCKLDYSDDAANYRVRDDFVFTPTQSADKLWSLNLKDRKKRAYSFQADYALKGQNTKKIDGPRTTEDEMI ILEIPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81620; Mature: 81620
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIPPHDRIDDITIYKDSDDPWMFYAIANIPRLRLGPDGKPVFTFLKYAEVDPGPDGKG CEEECCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHEEEHHCCCCCCCCCC VSGGYVQFDTAFGLTSDQAARVRGVLQERADKAARDQGLPNQPVRLGDPTWTEGSIALVT CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEE FQEGTGIVDKVMGGGTPSLLGDNIAVSALQLSEAGAQLFWAACQMPTMPIGIVMKMKFLA EECCCCHHHHHHCCCCHHHCCCCCEEEEEEHHHHCHHHHHHHHCCCCCCHHHHHHHHHHH RIPSIEMHVWLQSENFASYYEKIDRDEPFWGDDTVTQTRREDFRRTNSGDVNVVRWPDFS HCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC ADPSSEKKFKDEIVEWGWSLLQDHFKAALADVIPPFTERGEIDGIEHVERSLIVSKVSDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC DVYFKQDSIIPWSINPQATLQSALAAGGGRFPKEDFFKEIPLNDAFFKRLSVKVDCNASW EEEEECCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHEEEEEECCCCH SEGIIHSVVVTLRYADKIESFTFQKDEDTFFFRRLIDPALGRTYRYDAVIHFKASTRTLT HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEEECCEEEE IPETETDKAALVIPVSRLAGLAVTVLAGDIDWEKTVQQVQVALSYEDAANGVAERTTTLL CCCCCCCCEEEEEEHHHHCCEEEEEEECCCCHHHHHHHHHHEEEHHHHHCCHHHCEEEEE LAADSKSQVWKEQILAAVTKPYRYTPTYVLKSGRTLARPTAQSTNDTLIINDVFGERINL EEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCEEEEEECCCCEEEE TFVPAGSFTRMAGIFVEVDYQDAANDHRVKQTVQLLSEKDSPVVSIPRWDNGPTKFRYRF EEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEE RVSYKDGRLQEVDWKDGDGSSSLAVGELFEETVEITIKADLLDWSLLRFVLCKLDYSDDA EEEECCCCEEECCCCCCCCCCCCHHHHHHHCEEEEEEEEEHHHHHHHHHHHHHCCCCCCC ANYRVRDDFVFTPTQSADKLWSLNLKDRKKRAYSFQADYALKGQNTKKIDGPRTTEDEMI CCEEEECCEEECCCCCCCCEEECCCHHHHHHHEEEECCEEECCCCCCCCCCCCCCCCCEE ILEIPV EEEECC >Mature Secondary Structure MLIIPPHDRIDDITIYKDSDDPWMFYAIANIPRLRLGPDGKPVFTFLKYAEVDPGPDGKG CEEECCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHEEEHHCCCCCCCCCC VSGGYVQFDTAFGLTSDQAARVRGVLQERADKAARDQGLPNQPVRLGDPTWTEGSIALVT CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEE FQEGTGIVDKVMGGGTPSLLGDNIAVSALQLSEAGAQLFWAACQMPTMPIGIVMKMKFLA EECCCCHHHHHHCCCCHHHCCCCCEEEEEEHHHHCHHHHHHHHCCCCCCHHHHHHHHHHH RIPSIEMHVWLQSENFASYYEKIDRDEPFWGDDTVTQTRREDFRRTNSGDVNVVRWPDFS HCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC ADPSSEKKFKDEIVEWGWSLLQDHFKAALADVIPPFTERGEIDGIEHVERSLIVSKVSDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC DVYFKQDSIIPWSINPQATLQSALAAGGGRFPKEDFFKEIPLNDAFFKRLSVKVDCNASW EEEEECCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHEEEEEECCCCH SEGIIHSVVVTLRYADKIESFTFQKDEDTFFFRRLIDPALGRTYRYDAVIHFKASTRTLT HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEEECCEEEE IPETETDKAALVIPVSRLAGLAVTVLAGDIDWEKTVQQVQVALSYEDAANGVAERTTTLL CCCCCCCCEEEEEEHHHHCCEEEEEEECCCCHHHHHHHHHHEEEHHHHHCCHHHCEEEEE LAADSKSQVWKEQILAAVTKPYRYTPTYVLKSGRTLARPTAQSTNDTLIINDVFGERINL EEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCEEEEEECCCCEEEE TFVPAGSFTRMAGIFVEVDYQDAANDHRVKQTVQLLSEKDSPVVSIPRWDNGPTKFRYRF EEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEE RVSYKDGRLQEVDWKDGDGSSSLAVGELFEETVEITIKADLLDWSLLRFVLCKLDYSDDA EEEECCCCEEECCCCCCCCCCCCHHHHHHHCEEEEEEEEEHHHHHHHHHHHHHCCCCCCC ANYRVRDDFVFTPTQSADKLWSLNLKDRKKRAYSFQADYALKGQNTKKIDGPRTTEDEMI CCEEEECCEEECCCCCCCCEEECCCHHHHHHHEEEECCEEECCCCCCCCCCCCCCCCCEE ILEIPV EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA