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The map label for this gene is accD [C]

Identifier: 83592660

GI number: 83592660

Start: 1562704

End: 1563660

Strand: Direct

Name: accD [C]

Synonym: Rru_A1324

Alternate gene names: 83592660

Gene position: 1562704-1563660 (Clockwise)

Preceding gene: 83592659

Following gene: 83592661

Centisome position: 35.9

GC content: 65.41

Gene sequence:

>957_bases
ATGCCGAACTGGAAAGCCCTTCAGGACAGCAGCTTCCTTGAAGCCAACGCCCGCGATCGCGCCCTTGGCGTGGTTGACGA
GGGGACCTTCACCGAGCTGGCCGGCCCCTTTGACCGCCGTTTCAGCCCGCACCTGGAAGTCCTTGGAGAAGCGGTCGAAT
TCGACGATGGCATCGTTACCGGCGTTGGCCGGATCGGCGTCACCCCGGTGTTCGTCATCTCCCAGGAAGGCCGCTTCATC
GGCGGTTCGGTCGGTGAGGTCGGCGGCGCCAAGATGGTCAACACCATCCGTCTGGCCGTCGAGTTCCACGACCAGCTGGT
CGCCAGCGTTCCCGATCTGACCGACGCCGAAAAGCCGATCGTCGTCATCTCGTTCGAGACCGGCGGCGTGCGTCTGCACG
AAGCCAATGCCGGTCTGCTGGCCCACGCCGAGGTGATGGATCAGATCCAGAAGGCGCGCGGCAAGGTGCCGGTGATCACC
CTCATCGGCTCCAAGGTCGGGTGCTTCGGCGGCATGGGCTTCGTCGCCGCCGCCACCGACGTGATCGTCATGAGCGAATT
CGGCCGCCTTGGCCTGACCGGTCCGGAAGTGATCGAGCAGGAAATGGGCAAGGAAGAGTTCGACAGCTCCGACCGGGGTC
TGGTGTTCCGCACCACCGGTGGCAAGCACAAGTACATCATGGGCGATTGTAACTACTTGGTGGAAAACACCGTCGCCGCC
TTCCGCGCCAAGGTGGCCGAGCTGGCCGTTCTGCCGATCTCGGCCTTCGAAGAGATGCGTCGCATCGGTTCGGCGGCGAC
GGTCGAGCGTCAGCTGCGCGGTGTCGCCCTCGCCGCCGAGATGCAGCCCAAGGACGCCCGCGACGTGTGGGCCAAGGCCG
GCAACGCCAATGCCGCCGCCCTGACCGACCTGCCGCTCGCCGACTTCCTCGCCCAGGTCAAGCGTCTGAGCGTCTGA

Upstream 100 bases:

>100_bases
CGTGTCGAGATCAACGACAACAATGCCACCCCCGCCGTGGTCCTGCTGCGCTTGCGCCAGGCCCTGGCGGAAGCGGCTGG
CAAGTAAGGAGAGCAGCGAT

Downstream 100 bases:

>100_bases
GCCCGGCCGTCCGCCATAATTCCCCCTATCAGGAGTCAATCATGGACGTCACCGAAACCATGATGGGTAAGGGCCGCGAG
GCGATCGACCTGATCGTCGA

Product: malonate decarboxylase subunit beta

Products: NA

Alternate protein names: Transcarboxylase 12S subunit [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPNWKALQDSSFLEANARDRALGVVDEGTFTELAGPFDRRFSPHLEVLGEAVEFDDGIVTGVGRIGVTPVFVISQEGRFI
GGSVGEVGGAKMVNTIRLAVEFHDQLVASVPDLTDAEKPIVVISFETGGVRLHEANAGLLAHAEVMDQIQKARGKVPVIT
LIGSKVGCFGGMGFVAAATDVIVMSEFGRLGLTGPEVIEQEMGKEEFDSSDRGLVFRTTGGKHKYIMGDCNYLVENTVAA
FRAKVAELAVLPISAFEEMRRIGSAATVERQLRGVALAAEMQPKDARDVWAKAGNANAAALTDLPLADFLAQVKRLSV

Sequences:

>Translated_318_residues
MPNWKALQDSSFLEANARDRALGVVDEGTFTELAGPFDRRFSPHLEVLGEAVEFDDGIVTGVGRIGVTPVFVISQEGRFI
GGSVGEVGGAKMVNTIRLAVEFHDQLVASVPDLTDAEKPIVVISFETGGVRLHEANAGLLAHAEVMDQIQKARGKVPVIT
LIGSKVGCFGGMGFVAAATDVIVMSEFGRLGLTGPEVIEQEMGKEEFDSSDRGLVFRTTGGKHKYIMGDCNYLVENTVAA
FRAKVAELAVLPISAFEEMRRIGSAATVERQLRGVALAAEMQPKDARDVWAKAGNANAAALTDLPLADFLAQVKRLSV
>Mature_317_residues
PNWKALQDSSFLEANARDRALGVVDEGTFTELAGPFDRRFSPHLEVLGEAVEFDDGIVTGVGRIGVTPVFVISQEGRFIG
GSVGEVGGAKMVNTIRLAVEFHDQLVASVPDLTDAEKPIVVISFETGGVRLHEANAGLLAHAEVMDQIQKARGKVPVITL
IGSKVGCFGGMGFVAAATDVIVMSEFGRLGLTGPEVIEQEMGKEEFDSSDRGLVFRTTGGKHKYIMGDCNYLVENTVAAF
RAKVAELAVLPISAFEEMRRIGSAATVERQLRGVALAAEMQPKDARDVWAKAGNANAAALTDLPLADFLAQVKRLSV

Specific function: The 12S subunit specifically catalyzes the transfer of the carboxyl group of methylmalonyl CoA to the biotin of the 1.3S subunit forming propanoyl-CoA and carboxylated 1.3S-biotin [H]

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 carboxyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011763
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =2.1.3.1 [H]

Molecular weight: Translated: 33944; Mature: 33813

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNWKALQDSSFLEANARDRALGVVDEGTFTELAGPFDRRFSPHLEVLGEAVEFDDGIVT
CCCCCCCCCCCHHCCCCCCCEEEEECCCCHHHHCCCHHHCCCCHHHHHHHHHHCCCCEEE
GVGRIGVTPVFVISQEGRFIGGSVGEVGGAKMVNTIRLAVEFHDQLVASVPDLTDAEKPI
CCCCCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VVISFETGGVRLHEANAGLLAHAEVMDQIQKARGKVPVITLIGSKVGCFGGMGFVAAATD
EEEEECCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHH
VIVMSEFGRLGLTGPEVIEQEMGKEEFDSSDRGLVFRTTGGKHKYIMGDCNYLVENTVAA
HHEEHHCCCCCCCCHHHHHHHCCHHHCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHH
FRAKVAELAVLPISAFEEMRRIGSAATVERQLRGVALAAEMQPKDARDVWAKAGNANAAA
HHHHHHHHHEECHHHHHHHHHHCCHHHHHHHHHCEEEEECCCCCCHHHHHHHCCCCCCEE
LTDLPLADFLAQVKRLSV
EECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PNWKALQDSSFLEANARDRALGVVDEGTFTELAGPFDRRFSPHLEVLGEAVEFDDGIVT
CCCCCCCCCCHHCCCCCCCEEEEECCCCHHHHCCCHHHCCCCHHHHHHHHHHCCCCEEE
GVGRIGVTPVFVISQEGRFIGGSVGEVGGAKMVNTIRLAVEFHDQLVASVPDLTDAEKPI
CCCCCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VVISFETGGVRLHEANAGLLAHAEVMDQIQKARGKVPVITLIGSKVGCFGGMGFVAAATD
EEEEECCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHH
VIVMSEFGRLGLTGPEVIEQEMGKEEFDSSDRGLVFRTTGGKHKYIMGDCNYLVENTVAA
HHEEHHCCCCCCCCHHHHHHHCCHHHCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHH
FRAKVAELAVLPISAFEEMRRIGSAATVERQLRGVALAAEMQPKDARDVWAKAGNANAAA
HHHHHHHHHEECHHHHHHHHHHCCHHHHHHHHHCEEEEECCCCCCHHHHHHHCCCCCCEE
LTDLPLADFLAQVKRLSV
EECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8366018 [H]