Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is 83592661

Identifier: 83592661

GI number: 83592661

Start: 1563702

End: 1564595

Strand: Direct

Name: 83592661

Synonym: Rru_A1325

Alternate gene names: NA

Gene position: 1563702-1564595 (Clockwise)

Preceding gene: 83592660

Following gene: 83592662

Centisome position: 35.92

GC content: 65.44

Gene sequence:

>894_bases
ATGGACGTCACCGAAACCATGATGGGTAAGGGCCGCGAGGCGATCGACCTGATCGTCGATCCCCAGGGCTTTACCGAGAA
TACCGTCGGCAGCAAGACCTTCGATGATCCCGAGTTCGGCCCCGGCGCCGTTGTCGGCACCGGTCTGCTCAACGGGCAGA
CCTGCACGATCATCGCCAGCGATGGCAACGCCTTCAACGAGAAGTTCCCCGTCGTCTATGCCGGCATCATCGGCATGGAA
GAGGGTTACAAGATGGCCCAGGCCGTCTATGCCTCGCTGGAAGCCGACGCCGACAAGCCGATCGCGCAGAAGCGCCCGCT
GGTGCTGATCGTCGACACCCCGGGAAATGGTCCGGGCAAGACCGAAGAAATCTTCGGGATGAACAAGGCCACCGGCGCCT
ATCAGCTGGCTTTGGCCGAGGCCCGGCTCGCCGGTCATCCGATCGTCGCCATGGTCATCGGCCGCGCCATCTCCGGCGCC
TTCCTCTGCCATGGCCTCCAGGCCGACAACATCCTGTCGCTGGACGCCAATTTCGGCACGATGATCCACGTGATGCCGCT
GACCAGCGTCTCGCGCATCATCCGCAAGGATCTGGAAACCCTTCAGGAACTCTCGAAGGGCAACCCGGTCTTCGCCGCCG
GCCCGCGCTTCTTCTTCGCCTTGGGCGGGGTTGAGGAACTGGTGACCGCCATCGACGGCATGCGTCCGGCCATCATCGCC
CATATCGAGTCGATCCGTCAGGCCAAGCTGGCCGGCAAGCAGGACAGCCTGGGCCCCTGGGGCCGTGGCGCCCTGGGCGC
CGAGCGCGGCGGCCGGGTGGTTCGCCCCGAGCTGATCGCCTTGATGAACGCCGAGTTCGCCGCCGTGGCCAGCCAGTACG
CCCCGGCCCGCTAA

Upstream 100 bases:

>100_bases
CCCTGACCGACCTGCCGCTCGCCGACTTCCTCGCCCAGGTCAAGCGTCTGAGCGTCTGAGCCCGGCCGTCCGCCATAATT
CCCCCTATCAGGAGTCAATC

Downstream 100 bases:

>100_bases
CCTGATACGGCCCGAAAAAGGACGGTGATTCTCATGTCCGACGATCTGACGGTTCTCGAAGCGGCGCTCGACGCCTTCGG
CAACGCTCCCACCCTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Beta Subunit; LOW QUALITY PROTEIN Malonate Decarboxylase Gamma Subunit; Malonate Decarboxylase Subunit Beta/Gamma; Malonate Decarboxylase Subunit MdcE; Malonate Decarboxylase Gamma-Subunit; Beta Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Gamma-Subunit MdcE; Subunit Beta Of Malonate Decarboxylase

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MDVTETMMGKGREAIDLIVDPQGFTENTVGSKTFDDPEFGPGAVVGTGLLNGQTCTIIASDGNAFNEKFPVVYAGIIGME
EGYKMAQAVYASLEADADKPIAQKRPLVLIVDTPGNGPGKTEEIFGMNKATGAYQLALAEARLAGHPIVAMVIGRAISGA
FLCHGLQADNILSLDANFGTMIHVMPLTSVSRIIRKDLETLQELSKGNPVFAAGPRFFFALGGVEELVTAIDGMRPAIIA
HIESIRQAKLAGKQDSLGPWGRGALGAERGGRVVRPELIALMNAEFAAVASQYAPAR

Sequences:

>Translated_297_residues
MDVTETMMGKGREAIDLIVDPQGFTENTVGSKTFDDPEFGPGAVVGTGLLNGQTCTIIASDGNAFNEKFPVVYAGIIGME
EGYKMAQAVYASLEADADKPIAQKRPLVLIVDTPGNGPGKTEEIFGMNKATGAYQLALAEARLAGHPIVAMVIGRAISGA
FLCHGLQADNILSLDANFGTMIHVMPLTSVSRIIRKDLETLQELSKGNPVFAAGPRFFFALGGVEELVTAIDGMRPAIIA
HIESIRQAKLAGKQDSLGPWGRGALGAERGGRVVRPELIALMNAEFAAVASQYAPAR
>Mature_297_residues
MDVTETMMGKGREAIDLIVDPQGFTENTVGSKTFDDPEFGPGAVVGTGLLNGQTCTIIASDGNAFNEKFPVVYAGIIGME
EGYKMAQAVYASLEADADKPIAQKRPLVLIVDTPGNGPGKTEEIFGMNKATGAYQLALAEARLAGHPIVAMVIGRAISGA
FLCHGLQADNILSLDANFGTMIHVMPLTSVSRIIRKDLETLQELSKGNPVFAAGPRFFFALGGVEELVTAIDGMRPAIIA
HIESIRQAKLAGKQDSLGPWGRGALGAERGGRVVRPELIALMNAEFAAVASQYAPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31328; Mature: 31328

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50989 COA_CT_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTETMMGKGREAIDLIVDPQGFTENTVGSKTFDDPEFGPGAVVGTGLLNGQTCTIIAS
CCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC
DGNAFNEKFPVVYAGIIGMEEGYKMAQAVYASLEADADKPIAQKRPLVLIVDTPGNGPGK
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCC
TEEIFGMNKATGAYQLALAEARLAGHPIVAMVIGRAISGAFLCHGLQADNILSLDANFGT
CHHHHCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
MIHVMPLTSVSRIIRKDLETLQELSKGNPVFAAGPRFFFALGGVEELVTAIDGMRPAIIA
EEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHCCCCHHHHH
HIESIRQAKLAGKQDSLGPWGRGALGAERGGRVVRPELIALMNAEFAAVASQYAPAR
HHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCEEECHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MDVTETMMGKGREAIDLIVDPQGFTENTVGSKTFDDPEFGPGAVVGTGLLNGQTCTIIAS
CCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC
DGNAFNEKFPVVYAGIIGMEEGYKMAQAVYASLEADADKPIAQKRPLVLIVDTPGNGPGK
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCC
TEEIFGMNKATGAYQLALAEARLAGHPIVAMVIGRAISGAFLCHGLQADNILSLDANFGT
CHHHHCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
MIHVMPLTSVSRIIRKDLETLQELSKGNPVFAAGPRFFFALGGVEELVTAIDGMRPAIIA
EEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHCCCCHHHHH
HIESIRQAKLAGKQDSLGPWGRGALGAERGGRVVRPELIALMNAEFAAVASQYAPAR
HHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCEEECHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA