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The map label for this gene is yfhP [C]

Identifier: 83592507

GI number: 83592507

Start: 1388326

End: 1388772

Strand: Direct

Name: yfhP [C]

Synonym: Rru_A1171

Alternate gene names: 83592507

Gene position: 1388326-1388772 (Clockwise)

Preceding gene: 83592506

Following gene: 83592510

Centisome position: 31.89

GC content: 60.63

Gene sequence:

>447_bases
ATGCTAAGCAACAAGGCGAAATACGGCCTCAAGGCCCTTCTCTATCTTGCCGAACACGGTGATGGGACGCCGATCCTGAT
CGCCGAGATCGCTGAAAGCGAAGATATCTCGAAGAAATTCCTCGACGCCATCCTTCTGGAATTGCGCAATGCCGGGCTTG
TCGGCAGCAAGAAGGGGCGCGGCGGCGGTTATTTCCTGGCCAAACCCACCGATCAGATCTTCATCGGCACCGTCATCCGC
GTGCTTGATGGGCCGATCGCCCCGATCCCCTGCGCCAGCCGCACCGCCTATCGTCCCTGTGACGATTGCGGCAGCGTCCA
GGAATGCGCGATCCGTGGCCTGATGCTCGATGTGCGCGATGCCATGGCTGCCATCCTTGATTCCACCACCCTGGCCGCCC
TTCACGCCCGGGGCAAGGCCGCCCAGACCCTGATGTATTACATCTGA

Upstream 100 bases:

>100_bases
GATCCGCCACGGTCCGTCCCGCATTCCTTGCCCACTCCATGGTTTTCATTGACAATATGGACTAAATGGACAAAAAGGGC
CGGCGTCGTCCGAGGGGGTC

Downstream 100 bases:

>100_bases
CCTCAGGTCGTCTGCGGCCGCCGGCGGTCGAATTTGCGCGCCAGCACCACCGAGGATTTGGTCCGCGTCACCCCGGGCAG
TCCGGCCAGATCATCGAGCA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLSNKAKYGLKALLYLAEHGDGTPILIAEIAESEDISKKFLDAILLELRNAGLVGSKKGRGGGYFLAKPTDQIFIGTVIR
VLDGPIAPIPCASRTAYRPCDDCGSVQECAIRGLMLDVRDAMAAILDSTTLAALHARGKAAQTLMYYI

Sequences:

>Translated_148_residues
MLSNKAKYGLKALLYLAEHGDGTPILIAEIAESEDISKKFLDAILLELRNAGLVGSKKGRGGGYFLAKPTDQIFIGTVIR
VLDGPIAPIPCASRTAYRPCDDCGSVQECAIRGLMLDVRDAMAAILDSTTLAALHARGKAAQTLMYYI
>Mature_148_residues
MLSNKAKYGLKALLYLAEHGDGTPILIAEIAESEDISKKFLDAILLELRNAGLVGSKKGRGGGYFLAKPTDQIFIGTVIR
VLDGPIAPIPCASRTAYRPCDDCGSVQECAIRGLMLDVRDAMAAILDSTTLAALHARGKAAQTLMYYI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=133, Percent_Identity=30.8270676691729, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1790621, Length=133, Percent_Identity=30.0751879699248, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15829; Mature: 15829

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNKAKYGLKALLYLAEHGDGTPILIAEIAESEDISKKFLDAILLELRNAGLVGSKKGR
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GGGYFLAKPTDQIFIGTVIRVLDGPIAPIPCASRTAYRPCDDCGSVQECAIRGLMLDVRD
CCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AMAAILDSTTLAALHARGKAAQTLMYYI
HHHHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MLSNKAKYGLKALLYLAEHGDGTPILIAEIAESEDISKKFLDAILLELRNAGLVGSKKGR
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GGGYFLAKPTDQIFIGTVIRVLDGPIAPIPCASRTAYRPCDDCGSVQECAIRGLMLDVRD
CCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AMAAILDSTTLAALHARGKAAQTLMYYI
HHHHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]