| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592487
Identifier: 83592487
GI number: 83592487
Start: 1360987
End: 1362612
Strand: Reverse
Name: 83592487
Synonym: Rru_A1151
Alternate gene names: NA
Gene position: 1362612-1360987 (Counterclockwise)
Preceding gene: 83592488
Following gene: 83592486
Centisome position: 31.3
GC content: 67.71
Gene sequence:
>1626_bases ATGGCGCGACTATTGTGCCGTGTCGAAGGCGTCAATTTTGGCGCGACCGTCTTCGACACCAATGATCTTTCAACCATCCG GGGCGCCTCCCTAGCCCTTCTCGCCCTTCCCGAAACCGTCTCCGCGGCCCTTCCGTCCGACGCGATGCTTCTTTACGCCG GGGCCTCCCAATGCGCCCATATCGTCGACACAGCGCTCTCGGCGGACGCCCTTGCGGCGACGGTAACCAAGGCCCTGGCC GCCGCCGATGGCCCTCTGGCCCATCTGACCACGGTGGTCGATGTCGTCGCCATTAAGGGCGGCGACGAGATGGACGCCTT GAACCGGGCCGAGGCCCGCAACCACGCCCGGCAGTTCCGGCAATGGACCCTCGACCCCCTGCCCTTCACCGCCGACGCCA AGGATGTCGGCGCCCTGGAAGGCGCGCGGCCGGGGACCGTTTCTTCGATCCTGCCCAAGGGGAAGGGCGCCCCCCTCCTT GATCCCGAGGCCGCCGCGACCGGCGGACAGCCCGACCGTCCGCTGTCGGAGGCCGTGAACGCCAAGCGACGTCATGGCAG CAGAAAAGCGCGTCAGGGCTTTTTCACTAGCCAATTGGCGGAGCAAGCCGATGCCATCCTGGGACGCGGCCCCGACCGTT TGGCGTTCACCGACAGTCTTCAAGATATGGTCGAGGGCGCGCCGGCGACCATTCCCCCCTCGGCCCGGGGCAAGGTGGCG GTCGTCTACGCCGATGGCAATGCCTTTGGCAAAGCCCGCAAAAAGGCCGGGGTCGAAGTCTTCTCCCGGCAGCTTGGCGC CTTGCGCAAAACCCTGTTGAAGGAAATCCTGCGCTGGTTCGCCGCCGGGGCGAGAACCCCGGCCCTGGCGCCCCTCTTCG CCGTCGACGACGGGGCTCAACGCCACCTGCGGCTGGAGACCCTGCTGTGGGGCGGCGACGAGGCCCTGTTCGCCATGCCG TCCTGGCTGGCCCTGCCCTTCGCCCGGGGGGTCTTCAAGGTCACCGAGGGGTGGTCGATCGAAGGCCAGCCCCTGACCCA CGCCATGGGCATCGTCATCGCCGACCGTAAAACCCCCATCCGCCAATTGACCGCCCTGGCCCACGCCTCGGCGGATCTGG CCAAGGCCGCCGGCCTCAACGATCGGTCGAGCTTGACGGTGGACGTGTTTGAAAGCCTTGCCCCGCCCGACGAACCCGAC GCTCTGGGCGAGGCCCGCGAAACGCGGTTCGGCACGCCCGGCGAAGGGGCTTTGGCCCGGGTCTTGGCCTTTCCGGCGAC GGCGGACGACCTGGACACCCTGTTCAAACGGCTGGGCACCCTCAAGGGAACAAAACAGGACGAGGGCTTCCCCAGAAGCC AGATCTACGCCGCCCTGCGCGCCGTCACCGCCAAGGGGGCGCGACCCCTGGACCCGGTAGCCGAGGACTTGGCCTATGCG GTTCTGAACGACCACGACTTGCGCACGGGCCAGGACGCGATGAATCCCGTCAACCATCGGCTGCCCGCCATCGGGGGCCG CCCCTTGGCCGTCGACCTCGTCTTGCTGACCACCCTGTGGGACTACCTCCATTTCGAAGAGGCCAACCCGCCCGCCTTCC CCGAAGATCAGAGGGGGAACCCCTGA
Upstream 100 bases:
>100_bases GATTTTAAAGAAAAAAACCACCTTCCCTAGCCAGACTTTCGGTATCACGCTACAGTGATTTGCTGGTTTCAACCGATGGA ACAGGGAGGGCCGAGACCCC
Downstream 100 bases:
>100_bases TGACCATGGCCCGTTATCGCTTCGACCTCCGCCTTTGCGTTCGCTCGCCGTTCTTGTTTCGCGGCCTGACCACGGCGGCC TTGGGACTGGACGCCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MARLLCRVEGVNFGATVFDTNDLSTIRGASLALLALPETVSAALPSDAMLLYAGASQCAHIVDTALSADALAATVTKALA AADGPLAHLTTVVDVVAIKGGDEMDALNRAEARNHARQFRQWTLDPLPFTADAKDVGALEGARPGTVSSILPKGKGAPLL DPEAAATGGQPDRPLSEAVNAKRRHGSRKARQGFFTSQLAEQADAILGRGPDRLAFTDSLQDMVEGAPATIPPSARGKVA VVYADGNAFGKARKKAGVEVFSRQLGALRKTLLKEILRWFAAGARTPALAPLFAVDDGAQRHLRLETLLWGGDEALFAMP SWLALPFARGVFKVTEGWSIEGQPLTHAMGIVIADRKTPIRQLTALAHASADLAKAAGLNDRSSLTVDVFESLAPPDEPD ALGEARETRFGTPGEGALARVLAFPATADDLDTLFKRLGTLKGTKQDEGFPRSQIYAALRAVTAKGARPLDPVAEDLAYA VLNDHDLRTGQDAMNPVNHRLPAIGGRPLAVDLVLLTTLWDYLHFEEANPPAFPEDQRGNP
Sequences:
>Translated_541_residues MARLLCRVEGVNFGATVFDTNDLSTIRGASLALLALPETVSAALPSDAMLLYAGASQCAHIVDTALSADALAATVTKALA AADGPLAHLTTVVDVVAIKGGDEMDALNRAEARNHARQFRQWTLDPLPFTADAKDVGALEGARPGTVSSILPKGKGAPLL DPEAAATGGQPDRPLSEAVNAKRRHGSRKARQGFFTSQLAEQADAILGRGPDRLAFTDSLQDMVEGAPATIPPSARGKVA VVYADGNAFGKARKKAGVEVFSRQLGALRKTLLKEILRWFAAGARTPALAPLFAVDDGAQRHLRLETLLWGGDEALFAMP SWLALPFARGVFKVTEGWSIEGQPLTHAMGIVIADRKTPIRQLTALAHASADLAKAAGLNDRSSLTVDVFESLAPPDEPD ALGEARETRFGTPGEGALARVLAFPATADDLDTLFKRLGTLKGTKQDEGFPRSQIYAALRAVTAKGARPLDPVAEDLAYA VLNDHDLRTGQDAMNPVNHRLPAIGGRPLAVDLVLLTTLWDYLHFEEANPPAFPEDQRGNP >Mature_540_residues ARLLCRVEGVNFGATVFDTNDLSTIRGASLALLALPETVSAALPSDAMLLYAGASQCAHIVDTALSADALAATVTKALAA ADGPLAHLTTVVDVVAIKGGDEMDALNRAEARNHARQFRQWTLDPLPFTADAKDVGALEGARPGTVSSILPKGKGAPLLD PEAAATGGQPDRPLSEAVNAKRRHGSRKARQGFFTSQLAEQADAILGRGPDRLAFTDSLQDMVEGAPATIPPSARGKVAV VYADGNAFGKARKKAGVEVFSRQLGALRKTLLKEILRWFAAGARTPALAPLFAVDDGAQRHLRLETLLWGGDEALFAMPS WLALPFARGVFKVTEGWSIEGQPLTHAMGIVIADRKTPIRQLTALAHASADLAKAAGLNDRSSLTVDVFESLAPPDEPDA LGEARETRFGTPGEGALARVLAFPATADDLDTLFKRLGTLKGTKQDEGFPRSQIYAALRAVTAKGARPLDPVAEDLAYAV LNDHDLRTGQDAMNPVNHRLPAIGGRPLAVDLVLLTTLWDYLHFEEANPPAFPEDQRGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57311; Mature: 57179
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLLCRVEGVNFGATVFDTNDLSTIRGASLALLALPETVSAALPSDAMLLYAGASQCAH CCCEEEEECCCCCCEEEEECCCCCHHCCCCEEEEECCHHHHHHCCCCCEEEEECHHHHHH IVDTALSADALAATVTKALAAADGPLAHLTTVVDVVAIKGGDEMDALNRAEARNHARQFR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QWTLDPLPFTADAKDVGALEGARPGTVSSILPKGKGAPLLDPEAAATGGQPDRPLSEAVN HCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHH AKRRHGSRKARQGFFTSQLAEQADAILGRGPDRLAFTDSLQDMVEGAPATIPPSARGKVA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEE VVYADGNAFGKARKKAGVEVFSRQLGALRKTLLKEILRWFAAGARTPALAPLFAVDDGAQ EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH RHLRLETLLWGGDEALFAMPSWLALPFARGVFKVTEGWSIEGQPLTHAMGIVIADRKTPI HHEEEEEEEECCCHHHHHCCHHHHHHHHHCCEEECCCCCCCCCCHHHEEEEEEECCCCHH RQLTALAHASADLAKAAGLNDRSSLTVDVFESLAPPDEPDALGEARETRFGTPGEGALAR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHCCHHHHCCCCCCCHHHHH VLAFPATADDLDTLFKRLGTLKGTKQDEGFPRSQIYAALRAVTAKGARPLDPVAEDLAYA HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLNDHDLRTGQDAMNPVNHRLPAIGGRPLAVDLVLLTTLWDYLHFEEANPPAFPEDQRGN HHCCCCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC P C >Mature Secondary Structure ARLLCRVEGVNFGATVFDTNDLSTIRGASLALLALPETVSAALPSDAMLLYAGASQCAH CCEEEEECCCCCCEEEEECCCCCHHCCCCEEEEECCHHHHHHCCCCCEEEEECHHHHHH IVDTALSADALAATVTKALAAADGPLAHLTTVVDVVAIKGGDEMDALNRAEARNHARQFR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QWTLDPLPFTADAKDVGALEGARPGTVSSILPKGKGAPLLDPEAAATGGQPDRPLSEAVN HCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHH AKRRHGSRKARQGFFTSQLAEQADAILGRGPDRLAFTDSLQDMVEGAPATIPPSARGKVA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEE VVYADGNAFGKARKKAGVEVFSRQLGALRKTLLKEILRWFAAGARTPALAPLFAVDDGAQ EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH RHLRLETLLWGGDEALFAMPSWLALPFARGVFKVTEGWSIEGQPLTHAMGIVIADRKTPI HHEEEEEEEECCCHHHHHCCHHHHHHHHHCCEEECCCCCCCCCCHHHEEEEEEECCCCHH RQLTALAHASADLAKAAGLNDRSSLTVDVFESLAPPDEPDALGEARETRFGTPGEGALAR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHCCHHHHCCCCCCCHHHHH VLAFPATADDLDTLFKRLGTLKGTKQDEGFPRSQIYAALRAVTAKGARPLDPVAEDLAYA HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLNDHDLRTGQDAMNPVNHRLPAIGGRPLAVDLVLLTTLWDYLHFEEANPPAFPEDQRGN HHCCCCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA