| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592488
Identifier: 83592488
GI number: 83592488
Start: 1362782
End: 1363687
Strand: Reverse
Name: 83592488
Synonym: Rru_A1152
Alternate gene names: NA
Gene position: 1363687-1362782 (Counterclockwise)
Preceding gene: 83592489
Following gene: 83592487
Centisome position: 31.33
GC content: 69.54
Gene sequence:
>906_bases ATGCTTGGCTTTGATCCCATTGATTGGATGGCGGTTCCCGGCTCGTTGGCGAACGACTTGCAACGGCGGTTGCGCGGGGT TGTGGTGTCGCCGCGCCGGCTGTCTTTGCTGACGCCGGGCGTGAACGCCACCATTCCCATGCTGCGCGGGGTCTGGGGAT GCGCCCTGCATGACCGCGACCGGGAAACCTATGCCACGGTGTTCGAGGGTCTGGGGCCCGATGGCGATCCCAGTGACCGG CGGCCGCTTTATGTGTTGCGCCCAGCCCCGGCCGACCCGCGCGACGCCCCGGCCCTGGAGTGGATCAGCCTGGGCGGCGC CCTGGCCCACGACAGCGTGTTGCTCGACGCCTGGATGGATGCGGCCGACCGTGGCCTTGGACCGCGCCGCCACCCTTTCG GATTTCGCGCGATGCGCCACCTGCGCGCCGATGGGTCCTGCGGGGGCGTAGCGCCCGCGGCGCTGCCGCTGGCTCCCCTG CCCTGGCCGCTGGCCGGTCCCCCGGCCGACACGCCCTGCCGGCTGACGTTCCATGTGCCTTTGCGCCTGATGCGCAAGGG GCGGCTGATCCTTTGCCCGACGCTGGGCGATATCGTCGCCGTCGGCCTGCGCCGTTTGGCCGATCTGGCGGGCAGCGCCG CCGAGGGCGAAGCCCTGCGCGCCCTGCAACCCGCCCTGCTGGAAACCGCCCATGCCGTGGCCGTTCGCCCTTGGCAGGGG GAAAGCGCCATCTTGCAGCGCTATTCCGCCAATCAGGGCGAGATTGAAATGAATGGCGTGCGGGGAACCCTGGCGTTTCC CTTCGGTCCCGGGGCCCTTTGGCCGCTGCTGGTCGCCTTGAGCTGGGTTCACCTAGGCAAAGGCACGGTCTTTGGCCTGG GGCAGCCGATCCTCGAAGACCTGTAA
Upstream 100 bases:
>100_bases TTTCTCGCCTTTCTCTCTGGGGTGTGGAACGCCTTGCCCAGGGCGGGCCGGGAAACACTCCCCCCTTGTCAACCAAATCG GGTGGACGGCATACTGGCTG
Downstream 100 bases:
>100_bases GCGGGATCGGGCCGGCGACCGTGGCGGGGAAAAACCCGGCCATTTCGTTCGCTTATTCCCCTCGAGCATGATTTTAAAGA AAAAAACCACCTTCCCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLGFDPIDWMAVPGSLANDLQRRLRGVVVSPRRLSLLTPGVNATIPMLRGVWGCALHDRDRETYATVFEGLGPDGDPSDR RPLYVLRPAPADPRDAPALEWISLGGALAHDSVLLDAWMDAADRGLGPRRHPFGFRAMRHLRADGSCGGVAPAALPLAPL PWPLAGPPADTPCRLTFHVPLRLMRKGRLILCPTLGDIVAVGLRRLADLAGSAAEGEALRALQPALLETAHAVAVRPWQG ESAILQRYSANQGEIEMNGVRGTLAFPFGPGALWPLLVALSWVHLGKGTVFGLGQPILEDL
Sequences:
>Translated_301_residues MLGFDPIDWMAVPGSLANDLQRRLRGVVVSPRRLSLLTPGVNATIPMLRGVWGCALHDRDRETYATVFEGLGPDGDPSDR RPLYVLRPAPADPRDAPALEWISLGGALAHDSVLLDAWMDAADRGLGPRRHPFGFRAMRHLRADGSCGGVAPAALPLAPL PWPLAGPPADTPCRLTFHVPLRLMRKGRLILCPTLGDIVAVGLRRLADLAGSAAEGEALRALQPALLETAHAVAVRPWQG ESAILQRYSANQGEIEMNGVRGTLAFPFGPGALWPLLVALSWVHLGKGTVFGLGQPILEDL >Mature_301_residues MLGFDPIDWMAVPGSLANDLQRRLRGVVVSPRRLSLLTPGVNATIPMLRGVWGCALHDRDRETYATVFEGLGPDGDPSDR RPLYVLRPAPADPRDAPALEWISLGGALAHDSVLLDAWMDAADRGLGPRRHPFGFRAMRHLRADGSCGGVAPAALPLAPL PWPLAGPPADTPCRLTFHVPLRLMRKGRLILCPTLGDIVAVGLRRLADLAGSAAEGEALRALQPALLETAHAVAVRPWQG ESAILQRYSANQGEIEMNGVRGTLAFPFGPGALWPLLVALSWVHLGKGTVFGLGQPILEDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32259; Mature: 32259
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGFDPIDWMAVPGSLANDLQRRLRGVVVSPRRLSLLTPGVNATIPMLRGVWGCALHDRD CCCCCCCCCEECCCHHHHHHHHHHHCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC RETYATVFEGLGPDGDPSDRRPLYVLRPAPADPRDAPALEWISLGGALAHDSVLLDAWMD HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH AADRGLGPRRHPFGFRAMRHLRADGSCGGVAPAALPLAPLPWPLAGPPADTPCRLTFHVP HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEECC LRLMRKGRLILCPTLGDIVAVGLRRLADLAGSAAEGEALRALQPALLETAHAVAVRPWQG HHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCC ESAILQRYSANQGEIEMNGVRGTLAFPFGPGALWPLLVALSWVHLGKGTVFGLGQPILED HHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHC L C >Mature Secondary Structure MLGFDPIDWMAVPGSLANDLQRRLRGVVVSPRRLSLLTPGVNATIPMLRGVWGCALHDRD CCCCCCCCCEECCCHHHHHHHHHHHCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC RETYATVFEGLGPDGDPSDRRPLYVLRPAPADPRDAPALEWISLGGALAHDSVLLDAWMD HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH AADRGLGPRRHPFGFRAMRHLRADGSCGGVAPAALPLAPLPWPLAGPPADTPCRLTFHVP HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEECC LRLMRKGRLILCPTLGDIVAVGLRRLADLAGSAAEGEALRALQPALLETAHAVAVRPWQG HHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCC ESAILQRYSANQGEIEMNGVRGTLAFPFGPGALWPLLVALSWVHLGKGTVFGLGQPILED HHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA