| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592486
Identifier: 83592486
GI number: 83592486
Start: 1359113
End: 1360987
Strand: Reverse
Name: 83592486
Synonym: Rru_A1150
Alternate gene names: NA
Gene position: 1360987-1359113 (Counterclockwise)
Preceding gene: 83592487
Following gene: 83592485
Centisome position: 31.27
GC content: 66.99
Gene sequence:
>1875_bases ATGACCATGGCCCGTTATCGCTTCGACCTCCGCCTTTGCGTTCGCTCGCCGTTCTTGTTTCGCGGCCTGACCACGGCGGC CTTGGGACTGGACGCCAGCGCCCTGCGCGATCCGGCGGGGCGCCCGCTTATTCCCGGCGACCAGATCCGCGGCGTTCTCA AGGAAGCCCTTGGCGACCTGCCCGAAACCGTGGTTCCAAAGGAAGGAGCCCTGTCCATCGACTGCCTCTTCGGCCGCAAA AGCGCCCGGGAGGACGAAGTTGGCGCGGCCAACCTGCCCGCCCGGCGCCGCATCCATTTCACCGATCTGGTGGGCGTGGA CATGGTCGGCGATCCCACCGACAAAACAGCGCCACGCCTCGGCCTTGACGGAAAGGGCGCCATTCACACCCGTATCGCCC TTGATGGCGAAAGCGGAACAGTGAAGACCGGCGCCCTCCAGGTCATTGAACTGGTCGCTCCCATGGGAGCGGCGGTGACC TTCAAGGGGACGATCACCGTTTTCGCCCCCCGGAACAGCGGGGAAAGCCTCACCGCCCTGTTGCGCAAGGCCCTTGCCCT CGTCGGATCCATCGGCGGATTGAAAAGCCCAGGTTTCGGGGAAGTGCTTGCCCAACGCTCCTCCCTCACCCTGAGCGAAA CCAGCCCTCTGGCGGCGGTCGCCGCCAAAGACGGTCCCAGCGGGCGCAAGCGCCTGAGCGTCACTTTCGATCGCCCCCTT TTGGTCGATACGGAGCGGCTGGCGGCCAATGTGGTGGCCGGCGCCGCAGTGATTCCTGGAACCGTCTTCAAGGGTGCTCT CGCCGACCGGCTGGCCCTTGGACAAGGCGCGCCGGAAGACGCGCCCGACATTGGCGGAGATTTGGGTGAAGCCCTGAGCG GCCTATCGCTGAGCCATGCCTACCCCCTGGACAAGGACGGGCGCCGTCTCTGCCGCCCGCTCCCCCTGTCCCTGGTCGCG GCGAAAGGGGAAGGGGACATCCTGCTGGGCGACGCCCTGGACCTTGGCGATGGCGAAGGGGCTTTCCTGAACGGCCATCC CGCCCTGTTTCAGGGGGATTGGAAGCCCGAGGTATTCGCCCCGGCCCTGCGCGCCGCCGGCTATCCACAGGGGAGCGCGC CTCCCAGGCTCGCCCGCACCCATACGGCCATCGATCCGAAAACCGGAACGGCGGCGGAAAGCATGCTGTACACCACCTTG CTCCGCGCCGTTTCCTCGCCCGACGACACCCCCCACTTTTGGGGGCTCGAGGTCGATACCTCCGGCCTGACGGGGCGGGC CGCCCAATTGGCCGAGGGCCTGATCGCCCTGATGCTGACGGACGGACTGGATGGCCTGGGCGGCACCGGGGCGACCGCCA CCTTCACGCTTCAAGAAGATTCGCCCCCCGCCGCCCTGGCGGAAATCCATGGCAAGCCCGGCCATTACGCCCTGTTGCTG GAAACACCCGCGGTGCTCTTCCACCCCAAAGAGGCTTGGCCGGAACAGGGCGTGGGCAAGGATCCCCGCACTCTTTACGG CGCTTATTTCGCAACCCATGTCCCCGGCGCCCGCCTCAAGGGCTTTTTCGCCTCCCAGCGCTTGGCGGGGGGCTATATCG CCCGGCGCCGCCGCCCCTATGGCATCACCGGGTATTTCCCCTTCGTCCTTACCGAGGCCGGATCCATCTTCGAGTTGGAA GTGACCGACGCGGTAGGTCGGGCGGCCCTGGAGACGATCCTGGCGCGGGGCTTGCCCCACGCGCCCCTGGATGGATCGCC CCCAACGTGGCGAACCTCGCCCTATCTGCCGGAAAACGGCTATGGCCGCGTGTCCACCACTTATCTGTCCCAACCGGCCC AGGCCCAACTGAGGGGGGCGGTCACCCATGTCTAG
Upstream 100 bases:
>100_bases TGGCCGTCGACCTCGTCTTGCTGACCACCCTGTGGGACTACCTCCATTTCGAAGAGGCCAACCCGCCCGCCTTCCCCGAA GATCAGAGGGGGAACCCCTG
Downstream 100 bases:
>100_bases GCTGCGTTTCGACATCGAGGGCAAAGTGACCGCCCTCTCCCCTTTGCATGTCGGCACCGGGGACTTCACCACCATAGAGG GGCTCTCCGGCAAAGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MTMARYRFDLRLCVRSPFLFRGLTTAALGLDASALRDPAGRPLIPGDQIRGVLKEALGDLPETVVPKEGALSIDCLFGRK SAREDEVGAANLPARRRIHFTDLVGVDMVGDPTDKTAPRLGLDGKGAIHTRIALDGESGTVKTGALQVIELVAPMGAAVT FKGTITVFAPRNSGESLTALLRKALALVGSIGGLKSPGFGEVLAQRSSLTLSETSPLAAVAAKDGPSGRKRLSVTFDRPL LVDTERLAANVVAGAAVIPGTVFKGALADRLALGQGAPEDAPDIGGDLGEALSGLSLSHAYPLDKDGRRLCRPLPLSLVA AKGEGDILLGDALDLGDGEGAFLNGHPALFQGDWKPEVFAPALRAAGYPQGSAPPRLARTHTAIDPKTGTAAESMLYTTL LRAVSSPDDTPHFWGLEVDTSGLTGRAAQLAEGLIALMLTDGLDGLGGTGATATFTLQEDSPPAALAEIHGKPGHYALLL ETPAVLFHPKEAWPEQGVGKDPRTLYGAYFATHVPGARLKGFFASQRLAGGYIARRRRPYGITGYFPFVLTEAGSIFELE VTDAVGRAALETILARGLPHAPLDGSPPTWRTSPYLPENGYGRVSTTYLSQPAQAQLRGAVTHV
Sequences:
>Translated_624_residues MTMARYRFDLRLCVRSPFLFRGLTTAALGLDASALRDPAGRPLIPGDQIRGVLKEALGDLPETVVPKEGALSIDCLFGRK SAREDEVGAANLPARRRIHFTDLVGVDMVGDPTDKTAPRLGLDGKGAIHTRIALDGESGTVKTGALQVIELVAPMGAAVT FKGTITVFAPRNSGESLTALLRKALALVGSIGGLKSPGFGEVLAQRSSLTLSETSPLAAVAAKDGPSGRKRLSVTFDRPL LVDTERLAANVVAGAAVIPGTVFKGALADRLALGQGAPEDAPDIGGDLGEALSGLSLSHAYPLDKDGRRLCRPLPLSLVA AKGEGDILLGDALDLGDGEGAFLNGHPALFQGDWKPEVFAPALRAAGYPQGSAPPRLARTHTAIDPKTGTAAESMLYTTL LRAVSSPDDTPHFWGLEVDTSGLTGRAAQLAEGLIALMLTDGLDGLGGTGATATFTLQEDSPPAALAEIHGKPGHYALLL ETPAVLFHPKEAWPEQGVGKDPRTLYGAYFATHVPGARLKGFFASQRLAGGYIARRRRPYGITGYFPFVLTEAGSIFELE VTDAVGRAALETILARGLPHAPLDGSPPTWRTSPYLPENGYGRVSTTYLSQPAQAQLRGAVTHV >Mature_623_residues TMARYRFDLRLCVRSPFLFRGLTTAALGLDASALRDPAGRPLIPGDQIRGVLKEALGDLPETVVPKEGALSIDCLFGRKS AREDEVGAANLPARRRIHFTDLVGVDMVGDPTDKTAPRLGLDGKGAIHTRIALDGESGTVKTGALQVIELVAPMGAAVTF KGTITVFAPRNSGESLTALLRKALALVGSIGGLKSPGFGEVLAQRSSLTLSETSPLAAVAAKDGPSGRKRLSVTFDRPLL VDTERLAANVVAGAAVIPGTVFKGALADRLALGQGAPEDAPDIGGDLGEALSGLSLSHAYPLDKDGRRLCRPLPLSLVAA KGEGDILLGDALDLGDGEGAFLNGHPALFQGDWKPEVFAPALRAAGYPQGSAPPRLARTHTAIDPKTGTAAESMLYTTLL RAVSSPDDTPHFWGLEVDTSGLTGRAAQLAEGLIALMLTDGLDGLGGTGATATFTLQEDSPPAALAEIHGKPGHYALLLE TPAVLFHPKEAWPEQGVGKDPRTLYGAYFATHVPGARLKGFFASQRLAGGYIARRRRPYGITGYFPFVLTEAGSIFELEV TDAVGRAALETILARGLPHAPLDGSPPTWRTSPYLPENGYGRVSTTYLSQPAQAQLRGAVTHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65316; Mature: 65185
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMARYRFDLRLCVRSPFLFRGLTTAALGLDASALRDPAGRPLIPGDQIRGVLKEALGDL CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCC PETVVPKEGALSIDCLFGRKSAREDEVGAANLPARRRIHFTDLVGVDMVGDPTDKTAPRL CCHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHEECCCCCCCCCCCCCCCC GLDGKGAIHTRIALDGESGTVKTGALQVIELVAPMGAAVTFKGTITVFAPRNSGESLTAL CCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCHHHHHH LRKALALVGSIGGLKSPGFGEVLAQRSSLTLSETSPLAAVAAKDGPSGRKRLSVTFDRPL HHHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCEEEEEECCCCCCCEEEEEEECCCE LVDTERLAANVVAGAAVIPGTVFKGALADRLALGQGAPEDAPDIGGDLGEALSGLSLSHA EEEHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC YPLDKDGRRLCRPLPLSLVAAKGEGDILLGDALDLGDGEGAFLNGHPALFQGDWKPEVFA CCCCCCCHHHHCCCCEEEEEECCCCCEEEECCEECCCCCCCEECCCCCEEECCCCCHHHH PALRAAGYPQGSAPPRLARTHTAIDPKTGTAAESMLYTTLLRAVSSPDDTPHFWGLEVDT HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC SGLTGRAAQLAEGLIALMLTDGLDGLGGTGATATFTLQEDSPPAALAEIHGKPGHYALLL CCCCCHHHHHHHHHHEEHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEE ETPAVLFHPKEAWPEQGVGKDPRTLYGAYFATHVPGARLKGFFASQRLAGGYIARRRRPY ECCEEEECCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCC GITGYFPFVLTEAGSIFELEVTDAVGRAALETILARGLPHAPLDGSPPTWRTSPYLPENG CCCCCHHHHEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC YGRVSTTYLSQPAQAQLRGAVTHV CCCEEEHHHCCCHHHHHHHHHCCC >Mature Secondary Structure TMARYRFDLRLCVRSPFLFRGLTTAALGLDASALRDPAGRPLIPGDQIRGVLKEALGDL CCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCC PETVVPKEGALSIDCLFGRKSAREDEVGAANLPARRRIHFTDLVGVDMVGDPTDKTAPRL CCHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHEECCCCCCCCCCCCCCCC GLDGKGAIHTRIALDGESGTVKTGALQVIELVAPMGAAVTFKGTITVFAPRNSGESLTAL CCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCHHHHHH LRKALALVGSIGGLKSPGFGEVLAQRSSLTLSETSPLAAVAAKDGPSGRKRLSVTFDRPL HHHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCEEEEEECCCCCCCEEEEEEECCCE LVDTERLAANVVAGAAVIPGTVFKGALADRLALGQGAPEDAPDIGGDLGEALSGLSLSHA EEEHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC YPLDKDGRRLCRPLPLSLVAAKGEGDILLGDALDLGDGEGAFLNGHPALFQGDWKPEVFA CCCCCCCHHHHCCCCEEEEEECCCCCEEEECCEECCCCCCCEECCCCCEEECCCCCHHHH PALRAAGYPQGSAPPRLARTHTAIDPKTGTAAESMLYTTLLRAVSSPDDTPHFWGLEVDT HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC SGLTGRAAQLAEGLIALMLTDGLDGLGGTGATATFTLQEDSPPAALAEIHGKPGHYALLL CCCCCHHHHHHHHHHEEHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEE ETPAVLFHPKEAWPEQGVGKDPRTLYGAYFATHVPGARLKGFFASQRLAGGYIARRRRPY ECCEEEECCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCC GITGYFPFVLTEAGSIFELEVTDAVGRAALETILARGLPHAPLDGSPPTWRTSPYLPENG CCCCCHHHHEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC YGRVSTTYLSQPAQAQLRGAVTHV CCCEEEHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA