Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83592485

Identifier: 83592485

GI number: 83592485

Start: 1357777

End: 1359120

Strand: Reverse

Name: 83592485

Synonym: Rru_A1149

Alternate gene names: NA

Gene position: 1359120-1357777 (Counterclockwise)

Preceding gene: 83592486

Following gene: 83592484

Centisome position: 31.22

GC content: 65.4

Gene sequence:

>1344_bases
ATGTCTAGGCTGCGTTTCGACATCGAGGGCAAAGTGACCGCCCTCTCCCCTTTGCATGTCGGCACCGGGGACTTCACCAC
CATAGAGGGGCTCTCCGGCAAAGCCGGAGCCAATGCCGCCCCCCAGGTCGCCCGCATCGCCCGCGACGCCATGGCTCGCC
CGATGATTCCCTCCACGGCGCTCAAAGGCGTGCTGCTGACCCTGGCCAGGAGCCTTGTCGATGTATCGGACGAGACCCTT
GAGGCGTTGTTTGGAACGATCAAGGCCGAGACCGGCGCCGACGACGAGCCCTCGGGCCGCATGGGCGCGGTGACGGTGTT
CTCCGCCTATCGGGTGAGCGAGGCGGTGGATGTGTCTTGCTATCCCTATGGCAGAGACGGTTGCTTCGTCGCCGCCCGGA
CCAGTATCGACGGCGCCAGCGGCGTGGCGGCGAATGCCAAGCTGTTCCACCAGGAAATGGTCGCCCCCGGCACCACCTTC
GGCTTTCGCTGCCGGATCGAGGCGCGGGGCGCGGCCGTGGCCTCGGCCAAGGGCCATCTGGAGGCCCTGCTCCCCATCCT
TTCGGCCCTGACCGACGAAAACGGCGTTCCTGTGGGCAAAGGCCAAGCCGATGGCTTCGGCCGCCTGCGCCTGGATGGAA
AATCCCTTAAGATCAGCCAATGGTCCCTGGATGGGGAAGGCCGCTACAAGGATAAGCCTCACCCCGTGGCCCTTAAGGCC
GCCAAACGTCGCAAGGTTGATGGACGCTGGCGGCTGGGCCTGACCTGCGAGGGGCCTTTCGCCGTGCTTGACGGCTCCTA
TCAATCCAACAAGGGCAAGCGGGACAAATCCGACAAGGAGCCCAACGCCCGCGCCCAAAGCGCGGGAAAAAACCTGCCGC
TGATCCTGGGAAGCAGCCTGTCGGGAGCCCTGCGCTCCCGGGCGGTCTGGCTGGAGAACCTGCGCCGCCACCGGGCGGGC
GCCCCCTTGCTCGATCTGGCGGACAATGAGACGCCCCATGCGGTCAACCGCCTGTTCGGCCGCACCGATTTTCGCGGGCT
CTTGGCGATCGAGGCCTTGACCGTGACCAAGGCCACGGAAAAGCCCTTCACCTCGGTAAAAATCGACCGTTTCTCGGGGG
CGCCGATCGATAACGCCCTGGTCACCACCCAAGCCTTCATCGGCGTGCGGGCGGTGGTGACCCTGGCCCTTGAGGCCCGG
GGCGAGGCACGCGCGACCGAAGCGGACCGCATGCTGCTTGCCACCCTGATCGATGACCTGCGCGACAATGGCCTGATGCT
GGGACATGGGACGAACAAGGGATTCGGCTGGTTCGATGTGACGACGGAGGAAATCAATGGATAG

Upstream 100 bases:

>100_bases
TGGCGAACCTCGCCCTATCTGCCGGAAAACGGCTATGGCCGCGTGTCCACCACTTATCTGTCCCAACCGGCCCAGGCCCA
ACTGAGGGGGGCGGTCACCC

Downstream 100 bases:

>100_bases
GGATCGCACCAGGGATATCGCGCTCGCGGTTGCCCAATTCACCAAGCGCTACCCCGCAAACCCGGTCGATGACCTCTATG
AACTGCCGGCCTTCGGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTALKGVLLTLARSLVDVSDETL
EALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSCYPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTF
GFRCRIEARGAAVASAKGHLEALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA
AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSLSGALRSRAVWLENLRRHRAG
APLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATEKPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEAR
GEARATEADRMLLATLIDDLRDNGLMLGHGTNKGFGWFDVTTEEING

Sequences:

>Translated_447_residues
MSRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTALKGVLLTLARSLVDVSDETL
EALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSCYPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTF
GFRCRIEARGAAVASAKGHLEALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA
AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSLSGALRSRAVWLENLRRHRAG
APLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATEKPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEAR
GEARATEADRMLLATLIDDLRDNGLMLGHGTNKGFGWFDVTTEEING
>Mature_446_residues
SRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTALKGVLLTLARSLVDVSDETLE
ALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSCYPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTFG
FRCRIEARGAAVASAKGHLEALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKAA
KRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSLSGALRSRAVWLENLRRHRAGA
PLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATEKPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEARG
EARATEADRMLLATLIDDLRDNGLMLGHGTNKGFGWFDVTTEEING

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47583; Mature: 47451

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTA
CCCEEEEECCCEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
LKGVLLTLARSLVDVSDETLEALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSC
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHCCCEEEEE
YPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTFGFRCRIEARGAAVASAKGHL
EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCHHHH
EALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEHH
AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSL
HHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCC
SGALRSRAVWLENLRRHRAGAPLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATE
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCC
KPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEARGEARATEADRMLLATLIDDL
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RDNGLMLGHGTNKGFGWFDVTTEEING
CCCCEEEECCCCCCCEEEEEEHHHCCC
>Mature Secondary Structure 
SRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTA
CCEEEEECCCEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
LKGVLLTLARSLVDVSDETLEALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSC
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHCCCEEEEE
YPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTFGFRCRIEARGAAVASAKGHL
EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCHHHH
EALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEHH
AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSL
HHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCC
SGALRSRAVWLENLRRHRAGAPLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATE
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCC
KPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEARGEARATEADRMLLATLIDDL
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RDNGLMLGHGTNKGFGWFDVTTEEING
CCCCEEEECCCCCCCEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA