| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592485
Identifier: 83592485
GI number: 83592485
Start: 1357777
End: 1359120
Strand: Reverse
Name: 83592485
Synonym: Rru_A1149
Alternate gene names: NA
Gene position: 1359120-1357777 (Counterclockwise)
Preceding gene: 83592486
Following gene: 83592484
Centisome position: 31.22
GC content: 65.4
Gene sequence:
>1344_bases ATGTCTAGGCTGCGTTTCGACATCGAGGGCAAAGTGACCGCCCTCTCCCCTTTGCATGTCGGCACCGGGGACTTCACCAC CATAGAGGGGCTCTCCGGCAAAGCCGGAGCCAATGCCGCCCCCCAGGTCGCCCGCATCGCCCGCGACGCCATGGCTCGCC CGATGATTCCCTCCACGGCGCTCAAAGGCGTGCTGCTGACCCTGGCCAGGAGCCTTGTCGATGTATCGGACGAGACCCTT GAGGCGTTGTTTGGAACGATCAAGGCCGAGACCGGCGCCGACGACGAGCCCTCGGGCCGCATGGGCGCGGTGACGGTGTT CTCCGCCTATCGGGTGAGCGAGGCGGTGGATGTGTCTTGCTATCCCTATGGCAGAGACGGTTGCTTCGTCGCCGCCCGGA CCAGTATCGACGGCGCCAGCGGCGTGGCGGCGAATGCCAAGCTGTTCCACCAGGAAATGGTCGCCCCCGGCACCACCTTC GGCTTTCGCTGCCGGATCGAGGCGCGGGGCGCGGCCGTGGCCTCGGCCAAGGGCCATCTGGAGGCCCTGCTCCCCATCCT TTCGGCCCTGACCGACGAAAACGGCGTTCCTGTGGGCAAAGGCCAAGCCGATGGCTTCGGCCGCCTGCGCCTGGATGGAA AATCCCTTAAGATCAGCCAATGGTCCCTGGATGGGGAAGGCCGCTACAAGGATAAGCCTCACCCCGTGGCCCTTAAGGCC GCCAAACGTCGCAAGGTTGATGGACGCTGGCGGCTGGGCCTGACCTGCGAGGGGCCTTTCGCCGTGCTTGACGGCTCCTA TCAATCCAACAAGGGCAAGCGGGACAAATCCGACAAGGAGCCCAACGCCCGCGCCCAAAGCGCGGGAAAAAACCTGCCGC TGATCCTGGGAAGCAGCCTGTCGGGAGCCCTGCGCTCCCGGGCGGTCTGGCTGGAGAACCTGCGCCGCCACCGGGCGGGC GCCCCCTTGCTCGATCTGGCGGACAATGAGACGCCCCATGCGGTCAACCGCCTGTTCGGCCGCACCGATTTTCGCGGGCT CTTGGCGATCGAGGCCTTGACCGTGACCAAGGCCACGGAAAAGCCCTTCACCTCGGTAAAAATCGACCGTTTCTCGGGGG CGCCGATCGATAACGCCCTGGTCACCACCCAAGCCTTCATCGGCGTGCGGGCGGTGGTGACCCTGGCCCTTGAGGCCCGG GGCGAGGCACGCGCGACCGAAGCGGACCGCATGCTGCTTGCCACCCTGATCGATGACCTGCGCGACAATGGCCTGATGCT GGGACATGGGACGAACAAGGGATTCGGCTGGTTCGATGTGACGACGGAGGAAATCAATGGATAG
Upstream 100 bases:
>100_bases TGGCGAACCTCGCCCTATCTGCCGGAAAACGGCTATGGCCGCGTGTCCACCACTTATCTGTCCCAACCGGCCCAGGCCCA ACTGAGGGGGGCGGTCACCC
Downstream 100 bases:
>100_bases GGATCGCACCAGGGATATCGCGCTCGCGGTTGCCCAATTCACCAAGCGCTACCCCGCAAACCCGGTCGATGACCTCTATG AACTGCCGGCCTTCGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTALKGVLLTLARSLVDVSDETL EALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSCYPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTF GFRCRIEARGAAVASAKGHLEALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSLSGALRSRAVWLENLRRHRAG APLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATEKPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEAR GEARATEADRMLLATLIDDLRDNGLMLGHGTNKGFGWFDVTTEEING
Sequences:
>Translated_447_residues MSRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTALKGVLLTLARSLVDVSDETL EALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSCYPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTF GFRCRIEARGAAVASAKGHLEALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSLSGALRSRAVWLENLRRHRAG APLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATEKPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEAR GEARATEADRMLLATLIDDLRDNGLMLGHGTNKGFGWFDVTTEEING >Mature_446_residues SRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTALKGVLLTLARSLVDVSDETLE ALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSCYPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTFG FRCRIEARGAAVASAKGHLEALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKAA KRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSLSGALRSRAVWLENLRRHRAGA PLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATEKPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEARG EARATEADRMLLATLIDDLRDNGLMLGHGTNKGFGWFDVTTEEING
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47583; Mature: 47451
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTA CCCEEEEECCCEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH LKGVLLTLARSLVDVSDETLEALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSC HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHCCCEEEEE YPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTFGFRCRIEARGAAVASAKGHL EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCHHHH EALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEHH AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSL HHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCC SGALRSRAVWLENLRRHRAGAPLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATE HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCC KPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEARGEARATEADRMLLATLIDDL CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RDNGLMLGHGTNKGFGWFDVTTEEING CCCCEEEECCCCCCCEEEEEEHHHCCC >Mature Secondary Structure SRLRFDIEGKVTALSPLHVGTGDFTTIEGLSGKAGANAAPQVARIARDAMARPMIPSTA CCEEEEECCCEEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH LKGVLLTLARSLVDVSDETLEALFGTIKAETGADDEPSGRMGAVTVFSAYRVSEAVDVSC HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHCCCEEEEE YPYGRDGCFVAARTSIDGASGVAANAKLFHQEMVAPGTTFGFRCRIEARGAAVASAKGHL EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCHHHH EALLPILSALTDENGVPVGKGQADGFGRLRLDGKSLKISQWSLDGEGRYKDKPHPVALKA HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEHH AKRRKVDGRWRLGLTCEGPFAVLDGSYQSNKGKRDKSDKEPNARAQSAGKNLPLILGSSL HHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCC SGALRSRAVWLENLRRHRAGAPLLDLADNETPHAVNRLFGRTDFRGLLAIEALTVTKATE HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCC KPFTSVKIDRFSGAPIDNALVTTQAFIGVRAVVTLALEARGEARATEADRMLLATLIDDL CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RDNGLMLGHGTNKGFGWFDVTTEEING CCCCEEEECCCCCCCEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA