Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83592484

Identifier: 83592484

GI number: 83592484

Start: 1355394

End: 1357784

Strand: Reverse

Name: 83592484

Synonym: Rru_A1148

Alternate gene names: NA

Gene position: 1357784-1355394 (Counterclockwise)

Preceding gene: 83592485

Following gene: 83592479

Centisome position: 31.19

GC content: 62.23

Gene sequence:

>2391_bases
ATGGATAGGGATCGCACCAGGGATATCGCGCTCGCGGTTGCCCAATTCACCAAGCGCTACCCCGCAAACCCGGTCGATGA
CCTCTATGAACTGCCGGCCTTCGGAGAGTATGACGAGGATTATGTCGAGGAGATCGCCCAGGCCGCTCTTGCTCGTCTGG
CCCCCCCACCCTCCCGCCGGACTATTCCAGGCAAACCCCAGAAGAGCATTACCCGACCCCACCCGGAAGACCCCGATAGT
AAGAAAAAAGCCAAGATAACGGCGCCTTTCCGCTTTGTCGGATTGGCCGAAACGGTTGTCCAGGCCGATGGCCCCACCGA
CATTAAGGTCCCCCTCGACGGAGGTGTCTGCGCCACCATCGATGTGGAGTGGGCCGTGGAATCCCCGCTGCTCATCGGCG
AGGACGACAAAGGTATCGTCTCGCCGATGAAGCTGTCCGGGGACGGCCCCGAGGCCCGCTATATCATCCCCGGCGCCACC
TTGAGGGGGCTGACACGCGCCGCCGTCGAGATCGTCGCCCATGGCCGCCTGGGCTTCGTCAATGCCCATCACCGCTATGG
CGTCCGCGACTTCGAACACCGCCATTATGGCGCGGACTCCGGGATCTCCAATGTGGCCAACGTCAAGGCGGGATGGCTGG
AATGCACCGGCGACGTGGAGGATCCGGACGCCTCGGTCTGGACCCTATCGCCCGTGGAAAACTGGTCCCACATCCCTATC
GACACGGTACTCGCCCTGATTAAGAACAAGGGCGGCGACCGCTTCAAATGGATCGGCATGTCCCTGGAAGATAAATACTC
CGCCTCGGGGCAGAAAGTCACCGGCGGCGAATTTGATTTCACCCGAACCGTAACCCTGTCCCCACCCCGGACCCAGTCTA
TTGACGTTAAAGGAAACACCTTTTCTCGCGAGATTTGTGCCGCTGGCCAGGGCCTAGAGGGCGTTCTGGTCTTCTCCGAT
AAAGTGCCCTTCGTCTCACGGCCGAAAAATGAGGCCGAAGACAAAATGAAAAAATACGAATACGTTTTCCATGGCGCGGT
CGGTGCTCCCCATCCCCTCCACCCAAGCGATGTCGCCGCCTTCCAACGCCTGAATTCCACGCCGTCGGACAACAAGCCCA
CCCCCACCGGGACTTACAAAAAGCTGCTTCCAACCCTCAAGGCGAGGCGGCGTGTGCCGGTCTTCTACGTCGGCGAGTTG
CCCGCATCCAACGACAAGGACCACCCCCAGCGCGCGCCAAAGGAGTTCTTTTTCGGCTTCACCCGCCTGTTCAAAATTCC
CCACACCCAATCCGTGGGAGAGGTTCTCAAGGAAAGTCGCCCGAATCATTGGATCACCGAAGGGCAGGACCATAGTCCGG
ATTTCGTTGAAGACCTGTTTGGCTATGTCATTGAGCCAAAGCAGCTTGGCTACGCGGCCGAGGAGCGGACCGATGTCAAG
GCCGTCGCCCGCCGCGGGCGCGTCGCCTTCTCCATGGCCAAAATCAATCCGCGCCAGACCCCCAAGGTCACGGAAAAGAT
CACCACGGTGATGATGGCGCCCCGGGCCTCTTTCGCCCCCTTCTATCTTGCCGCTTTGGGCCACCCCGGGGAACTGGACT
ATAGCGCGCCCGAGAAGTCGGTCACCCTGGCCGGGCGCAAGCGTTACCTTCCCCGGTTCACCAAGGGCGGTTCTTCCACC
GTGAGTGCGGTTTCGGCCAGGGCGGAGGAGCAGCGCAGCCGTTTGCAGGCGAACAACGCGGATGTGGTCAGCACCCTGCG
CTTCCTGACCCCGCCGGCCGCCGGCGACGACCTGCTGTTCACCAGTCGGATCCGTCTGACCAATGTGACACCGGTGGAAC
TGGGCGCGGTGCTGTTCGCCCTCACCCATGGCGGCGACCCGGCCAAGCCCTATCGGCATATGATCGGCCGGGGCAAACCC
TTCGGCGCCGGGCAAACCCGGATCAACGCCGCGCGCCTGACCGTGACCGCCAATGACACCAAGGCGGAGGCCCTGATCCA
ACCGCCGGAAGGCGACGACCTGGTGGCGGAAAACGGCCTGCGCGGTTTCTGCCCAGCGCCCCAACCCAACCGGCCCAGCC
ATGCCCACCGACCGTTTTTAAAGGCGTTCGAAACGCACATGCGCCAAGCCTTGAAGCAGCCCGCTTTCCCCGCAGTGCCC
GCCATCCAGGAATTCCTCGGGGCGTCCGATCCGAAGATCACCGAACAAATCGGCGCCGATCGCTTGGACTACATGCCCTT
GGATAGCTTCAACAAGGTCCGTTACGCTTTCAAACGTCACAAGGACGGCTCCTCCCATCCGGCGGACATCCGCCCGGGCA
ATGGCAAGGCCATGGGCACGGCGCCCCCCAAGCGCCTGCTTCCCGCGCCCATCCCAAAGAAGGCTCCGTAA

Upstream 100 bases:

>100_bases
CTTGCCACCCTGATCGATGACCTGCGCGACAATGGCCTGATGCTGGGACATGGGACGAACAAGGGATTCGGCTGGTTCGA
TGTGACGACGGAGGAAATCA

Downstream 100 bases:

>100_bases
CCCCAAGGTCGCGGGATCGAACTTATCTGCTCAAGGCGGCGGCTGTCAGGGGAAAGGGGGGTGTTCCGCAGCCTATTCCC
CCCTATGCCGCAGGCCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 796; Mature: 796

Protein sequence:

>796_residues
MDRDRTRDIALAVAQFTKRYPANPVDDLYELPAFGEYDEDYVEEIAQAALARLAPPPSRRTIPGKPQKSITRPHPEDPDS
KKKAKITAPFRFVGLAETVVQADGPTDIKVPLDGGVCATIDVEWAVESPLLIGEDDKGIVSPMKLSGDGPEARYIIPGAT
LRGLTRAAVEIVAHGRLGFVNAHHRYGVRDFEHRHYGADSGISNVANVKAGWLECTGDVEDPDASVWTLSPVENWSHIPI
DTVLALIKNKGGDRFKWIGMSLEDKYSASGQKVTGGEFDFTRTVTLSPPRTQSIDVKGNTFSREICAAGQGLEGVLVFSD
KVPFVSRPKNEAEDKMKKYEYVFHGAVGAPHPLHPSDVAAFQRLNSTPSDNKPTPTGTYKKLLPTLKARRRVPVFYVGEL
PASNDKDHPQRAPKEFFFGFTRLFKIPHTQSVGEVLKESRPNHWITEGQDHSPDFVEDLFGYVIEPKQLGYAAEERTDVK
AVARRGRVAFSMAKINPRQTPKVTEKITTVMMAPRASFAPFYLAALGHPGELDYSAPEKSVTLAGRKRYLPRFTKGGSST
VSAVSARAEEQRSRLQANNADVVSTLRFLTPPAAGDDLLFTSRIRLTNVTPVELGAVLFALTHGGDPAKPYRHMIGRGKP
FGAGQTRINAARLTVTANDTKAEALIQPPEGDDLVAENGLRGFCPAPQPNRPSHAHRPFLKAFETHMRQALKQPAFPAVP
AIQEFLGASDPKITEQIGADRLDYMPLDSFNKVRYAFKRHKDGSSHPADIRPGNGKAMGTAPPKRLLPAPIPKKAP

Sequences:

>Translated_796_residues
MDRDRTRDIALAVAQFTKRYPANPVDDLYELPAFGEYDEDYVEEIAQAALARLAPPPSRRTIPGKPQKSITRPHPEDPDS
KKKAKITAPFRFVGLAETVVQADGPTDIKVPLDGGVCATIDVEWAVESPLLIGEDDKGIVSPMKLSGDGPEARYIIPGAT
LRGLTRAAVEIVAHGRLGFVNAHHRYGVRDFEHRHYGADSGISNVANVKAGWLECTGDVEDPDASVWTLSPVENWSHIPI
DTVLALIKNKGGDRFKWIGMSLEDKYSASGQKVTGGEFDFTRTVTLSPPRTQSIDVKGNTFSREICAAGQGLEGVLVFSD
KVPFVSRPKNEAEDKMKKYEYVFHGAVGAPHPLHPSDVAAFQRLNSTPSDNKPTPTGTYKKLLPTLKARRRVPVFYVGEL
PASNDKDHPQRAPKEFFFGFTRLFKIPHTQSVGEVLKESRPNHWITEGQDHSPDFVEDLFGYVIEPKQLGYAAEERTDVK
AVARRGRVAFSMAKINPRQTPKVTEKITTVMMAPRASFAPFYLAALGHPGELDYSAPEKSVTLAGRKRYLPRFTKGGSST
VSAVSARAEEQRSRLQANNADVVSTLRFLTPPAAGDDLLFTSRIRLTNVTPVELGAVLFALTHGGDPAKPYRHMIGRGKP
FGAGQTRINAARLTVTANDTKAEALIQPPEGDDLVAENGLRGFCPAPQPNRPSHAHRPFLKAFETHMRQALKQPAFPAVP
AIQEFLGASDPKITEQIGADRLDYMPLDSFNKVRYAFKRHKDGSSHPADIRPGNGKAMGTAPPKRLLPAPIPKKAP
>Mature_796_residues
MDRDRTRDIALAVAQFTKRYPANPVDDLYELPAFGEYDEDYVEEIAQAALARLAPPPSRRTIPGKPQKSITRPHPEDPDS
KKKAKITAPFRFVGLAETVVQADGPTDIKVPLDGGVCATIDVEWAVESPLLIGEDDKGIVSPMKLSGDGPEARYIIPGAT
LRGLTRAAVEIVAHGRLGFVNAHHRYGVRDFEHRHYGADSGISNVANVKAGWLECTGDVEDPDASVWTLSPVENWSHIPI
DTVLALIKNKGGDRFKWIGMSLEDKYSASGQKVTGGEFDFTRTVTLSPPRTQSIDVKGNTFSREICAAGQGLEGVLVFSD
KVPFVSRPKNEAEDKMKKYEYVFHGAVGAPHPLHPSDVAAFQRLNSTPSDNKPTPTGTYKKLLPTLKARRRVPVFYVGEL
PASNDKDHPQRAPKEFFFGFTRLFKIPHTQSVGEVLKESRPNHWITEGQDHSPDFVEDLFGYVIEPKQLGYAAEERTDVK
AVARRGRVAFSMAKINPRQTPKVTEKITTVMMAPRASFAPFYLAALGHPGELDYSAPEKSVTLAGRKRYLPRFTKGGSST
VSAVSARAEEQRSRLQANNADVVSTLRFLTPPAAGDDLLFTSRIRLTNVTPVELGAVLFALTHGGDPAKPYRHMIGRGKP
FGAGQTRINAARLTVTANDTKAEALIQPPEGDDLVAENGLRGFCPAPQPNRPSHAHRPFLKAFETHMRQALKQPAFPAVP
AIQEFLGASDPKITEQIGADRLDYMPLDSFNKVRYAFKRHKDGSSHPADIRPGNGKAMGTAPPKRLLPAPIPKKAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87269; Mature: 87269

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDRTRDIALAVAQFTKRYPANPVDDLYELPAFGEYDEDYVEEIAQAALARLAPPPSRR
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TIPGKPQKSITRPHPEDPDSKKKAKITAPFRFVGLAETVVQADGPTDIKVPLDGGVCATI
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEE
DVEWAVESPLLIGEDDKGIVSPMKLSGDGPEARYIIPGATLRGLTRAAVEIVAHGRLGFV
EEEEEECCCEEECCCCCCCCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEE
NAHHRYGVRDFEHRHYGADSGISNVANVKAGWLECTGDVEDPDASVWTLSPVENWSHIPI
ECHHHCCCCHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCH
DTVLALIKNKGGDRFKWIGMSLEDKYSASGQKVTGGEFDFTRTVTLSPPRTQSIDVKGNT
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCEEECCCCC
FSREICAAGQGLEGVLVFSDKVPFVSRPKNEAEDKMKKYEYVFHGAVGAPHPLHPSDVAA
HHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH
FQRLNSTPSDNKPTPTGTYKKLLPTLKARRRVPVFYVGELPASNDKDHPQRAPKEFFFGF
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCHHHHHHHH
TRLFKIPHTQSVGEVLKESRPNHWITEGQDHSPDFVEDLFGYVIEPKQLGYAAEERTDVK
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECHHHHCCCHHHHHHHH
AVARRGRVAFSMAKINPRQTPKVTEKITTVMMAPRASFAPFYLAALGHPGELDYSAPEKS
HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
VTLAGRKRYLPRFTKGGSSTVSAVSARAEEQRSRLQANNADVVSTLRFLTPPAAGDDLLF
EEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEE
TSRIRLTNVTPVELGAVLFALTHGGDPAKPYRHMIGRGKPFGAGQTRINAARLTVTANDT
ECEEEEECCCHHHHHHHHEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCC
KAEALIQPPEGDDLVAENGLRGFCPAPQPNRPSHAHRPFLKAFETHMRQALKQPAFPAVP
CCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
AIQEFLGASDPKITEQIGADRLDYMPLDSFNKVRYAFKRHKDGSSHPADIRPGNGKAMGT
HHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
APPKRLLPAPIPKKAP
CCHHHCCCCCCCCCCC
>Mature Secondary Structure
MDRDRTRDIALAVAQFTKRYPANPVDDLYELPAFGEYDEDYVEEIAQAALARLAPPPSRR
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TIPGKPQKSITRPHPEDPDSKKKAKITAPFRFVGLAETVVQADGPTDIKVPLDGGVCATI
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEE
DVEWAVESPLLIGEDDKGIVSPMKLSGDGPEARYIIPGATLRGLTRAAVEIVAHGRLGFV
EEEEEECCCEEECCCCCCCCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEE
NAHHRYGVRDFEHRHYGADSGISNVANVKAGWLECTGDVEDPDASVWTLSPVENWSHIPI
ECHHHCCCCHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCH
DTVLALIKNKGGDRFKWIGMSLEDKYSASGQKVTGGEFDFTRTVTLSPPRTQSIDVKGNT
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCEEECCCCC
FSREICAAGQGLEGVLVFSDKVPFVSRPKNEAEDKMKKYEYVFHGAVGAPHPLHPSDVAA
HHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHH
FQRLNSTPSDNKPTPTGTYKKLLPTLKARRRVPVFYVGELPASNDKDHPQRAPKEFFFGF
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCHHHHHHHH
TRLFKIPHTQSVGEVLKESRPNHWITEGQDHSPDFVEDLFGYVIEPKQLGYAAEERTDVK
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECHHHHCCCHHHHHHHH
AVARRGRVAFSMAKINPRQTPKVTEKITTVMMAPRASFAPFYLAALGHPGELDYSAPEKS
HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
VTLAGRKRYLPRFTKGGSSTVSAVSARAEEQRSRLQANNADVVSTLRFLTPPAAGDDLLF
EEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEE
TSRIRLTNVTPVELGAVLFALTHGGDPAKPYRHMIGRGKPFGAGQTRINAARLTVTANDT
ECEEEEECCCHHHHHHHHEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCC
KAEALIQPPEGDDLVAENGLRGFCPAPQPNRPSHAHRPFLKAFETHMRQALKQPAFPAVP
CCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
AIQEFLGASDPKITEQIGADRLDYMPLDSFNKVRYAFKRHKDGSSHPADIRPGNGKAMGT
HHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
APPKRLLPAPIPKKAP
CCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA