| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is pabB [H]
Identifier: 83592468
GI number: 83592468
Start: 1333672
End: 1335096
Strand: Reverse
Name: pabB [H]
Synonym: Rru_A1132
Alternate gene names: 83592468
Gene position: 1335096-1333672 (Counterclockwise)
Preceding gene: 83592469
Following gene: 83592467
Centisome position: 30.67
GC content: 71.79
Gene sequence:
>1425_bases TTGTCCCTTCATATCCGCCCCATCGCCTTTGCCGACCCGCTGACCCTGGTCCCGGCCTTGGCCAAGGATCCGGTCTTCGC CTTTCTCGACAGCGCCGCCGCCGATCCCGGCGCGGGCGACGAGGATCGCGGCCGTTACAGCTATCTCTGCGCCGATCCCT GGCGGGTGATCACCGCCGATGACACCACGGTCCGGGTCGATAGCCGGCCGGTCGCCGGCGATCCCTTCGCCGTTCTCGCC GCCACCCTGGCCGAAATCGCCGAGGACGAGCCCGTCGCTTGCCCGGTGCCCTTCGCCACCGGCCTATGCGGTGTCCTTGG TTACGGCCTGGGTGCTTGGCTGGAACGGCTGGCCCCCGCCCCGGCCGATCGGCTGGCCCTGCCGGCGATGACCCTGGGCG TCTATGACTGCGTCGCCGCCTTCGACCTGCGCGCGCGCAAGGCCTGGATCGTTTCCAGCGGCCGGCCCGAACGCGATCCG CGGCGCCGCGCCGCCCGCGCCCTGGCCCGCGCCGAAGCCCTGGAACGGCGCTTGGCCGCGGTTTCCCTTGTCCCTGACGA GACCGCCGCCGCTTATGAAAAGACCGGGTCCTGGCGCGCCGAGCGACCGCGCGCGGCGATCTTGGCGGCGATCGGCAAGA CCATCGACGCCATCGAAGCCGGCGAGCTGTTCCAGGCCAATATCACCCAGCGCTTCCTGGCCGACCTTCCGCCCGGCCTC GACGACCTCACCTTGTATCGCCGCCTGCGCCGGCTGAGCCCGGCCCCCTTCGCCGCCCTGGTCGGCTGCGGCGCCGACCA CCGCCTGATCGGCGCCTCGCCCGAACGCTTCTTGCGCCTGGGCGCCGAGGGCCGGGTCGAGACGCGGCCGATCAAGGGCA CCCGCCGGCGCGACGCCGATCCGGCGCGCGACGCCGCCCAGGCCGCCGCTCTGGTGGCCAGCGAAAAGGACCGGGCCGAG AACCTGATGATCGTCGATCTGATGCGCAACGACCTGGGCCGGGTCTGCGCCATCGGCAGCGTCCGTGTGCCCCGGCTGAT CGCCCTGGAAAGCTTCGCCAGCGTCCACCATCTGGTCTCGGCGGTCGAAGGGCGGCTGCGCCCCGGCCTGGGGGCGATCG ACCTGCTGCGCGCCTGTTTTCCCGGCGGCTCGGTCACCGGGGCGCCGAAGATCCGCGCCATGGACCTGATCACCGCCCTG GAGCCGGCCCGGCGCGGCTGGTATTGCGGATCGGTGGCCTGGATCGGCGCCGATGGGGCGATGGATTCCAACATCGTCAT CCGCAGCCTCACCCGGGCCGGTGCCACCCTGATCGCCCAGGCCGGCGGCGCCATCACCGCGCCCTCCGATCCGGCCGAGG AATACGAGGAAAGCCTGATCAAAATGGCCCCCCTGCTCAGCGCCCTGGATGGGATCGAGCGATGA
Upstream 100 bases:
>100_bases GAAGCCGCCATCCCCTTGCGCGCCGCCGTCGCCAAAGGCCGGGGGGCAGCGGCCAAGGGCCGTGGTCGCAAGGGCAAAAG GTGAAAAGAAGCCGCAGCCC
Downstream 100 bases:
>100_bases CCGCCCGGCGACCGGCCGTCATTTGGCTGAACGACCGGCTCGTGCCCGCCGCAAAGGCCCGCATCGATCCCGCCGATCGC GGATTTCTGCTTGGCGATGG
Product: aminodeoxychorismate synthase, subunit I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSLHIRPIAFADPLTLVPALAKDPVFAFLDSAAADPGAGDEDRGRYSYLCADPWRVITADDTTVRVDSRPVAGDPFAVLA ATLAEIAEDEPVACPVPFATGLCGVLGYGLGAWLERLAPAPADRLALPAMTLGVYDCVAAFDLRARKAWIVSSGRPERDP RRRAARALARAEALERRLAAVSLVPDETAAAYEKTGSWRAERPRAAILAAIGKTIDAIEAGELFQANITQRFLADLPPGL DDLTLYRRLRRLSPAPFAALVGCGADHRLIGASPERFLRLGAEGRVETRPIKGTRRRDADPARDAAQAAALVASEKDRAE NLMIVDLMRNDLGRVCAIGSVRVPRLIALESFASVHHLVSAVEGRLRPGLGAIDLLRACFPGGSVTGAPKIRAMDLITAL EPARRGWYCGSVAWIGADGAMDSNIVIRSLTRAGATLIAQAGGAITAPSDPAEEYEESLIKMAPLLSALDGIER
Sequences:
>Translated_474_residues MSLHIRPIAFADPLTLVPALAKDPVFAFLDSAAADPGAGDEDRGRYSYLCADPWRVITADDTTVRVDSRPVAGDPFAVLA ATLAEIAEDEPVACPVPFATGLCGVLGYGLGAWLERLAPAPADRLALPAMTLGVYDCVAAFDLRARKAWIVSSGRPERDP RRRAARALARAEALERRLAAVSLVPDETAAAYEKTGSWRAERPRAAILAAIGKTIDAIEAGELFQANITQRFLADLPPGL DDLTLYRRLRRLSPAPFAALVGCGADHRLIGASPERFLRLGAEGRVETRPIKGTRRRDADPARDAAQAAALVASEKDRAE NLMIVDLMRNDLGRVCAIGSVRVPRLIALESFASVHHLVSAVEGRLRPGLGAIDLLRACFPGGSVTGAPKIRAMDLITAL EPARRGWYCGSVAWIGADGAMDSNIVIRSLTRAGATLIAQAGGAITAPSDPAEEYEESLIKMAPLLSALDGIER >Mature_473_residues SLHIRPIAFADPLTLVPALAKDPVFAFLDSAAADPGAGDEDRGRYSYLCADPWRVITADDTTVRVDSRPVAGDPFAVLAA TLAEIAEDEPVACPVPFATGLCGVLGYGLGAWLERLAPAPADRLALPAMTLGVYDCVAAFDLRARKAWIVSSGRPERDPR RRAARALARAEALERRLAAVSLVPDETAAAYEKTGSWRAERPRAAILAAIGKTIDAIEAGELFQANITQRFLADLPPGLD DLTLYRRLRRLSPAPFAALVGCGADHRLIGASPERFLRLGAEGRVETRPIKGTRRRDADPARDAAQAAALVASEKDRAEN LMIVDLMRNDLGRVCAIGSVRVPRLIALESFASVHHLVSAVEGRLRPGLGAIDLLRACFPGGSVTGAPKIRAMDLITALE PARRGWYCGSVAWIGADGAMDSNIVIRSLTRAGATLIAQAGGAITAPSDPAEEYEESLIKMAPLLSALDGIER
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=443, Percent_Identity=37.020316027088, Blast_Score=256, Evalue=3e-69, Organism=Escherichia coli, GI1787518, Length=374, Percent_Identity=32.0855614973262, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1786809, Length=230, Percent_Identity=28.2608695652174, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082077, Length=221, Percent_Identity=25.7918552036199, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=461, Percent_Identity=30.1518438177874, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6324361, Length=424, Percent_Identity=24.7641509433962, Blast_Score=111, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 50440; Mature: 50309
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHIRPIAFADPLTLVPALAKDPVFAFLDSAAADPGAGDEDRGRYSYLCADPWRVITAD CCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECC DTTVRVDSRPVAGDPFAVLAATLAEIAEDEPVACPVPFATGLCGVLGYGLGAWLERLAPA CCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PADRLALPAMTLGVYDCVAAFDLRARKAWIVSSGRPERDPRRRAARALARAEALERRLAA CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH VSLVPDETAAAYEKTGSWRAERPRAAILAAIGKTIDAIEAGELFQANITQRFLADLPPGL HEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC DDLTLYRRLRRLSPAPFAALVGCGADHRLIGASPERFLRLGAEGRVETRPIKGTRRRDAD HHHHHHHHHHHCCCCCHHHHHCCCCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC PARDAAQAAALVASEKDRAENLMIVDLMRNDLGRVCAIGSVRVPRLIALESFASVHHLVS HHHHHHHHHHHHHCCHHHHCCEEEHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHH AVEGRLRPGLGAIDLLRACFPGGSVTGAPKIRAMDLITALEPARRGWYCGSVAWIGADGA HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCEEEECCCCC MDSNIVIRSLTRAGATLIAQAGGAITAPSDPAEEYEESLIKMAPLLSALDGIER CCCCHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLHIRPIAFADPLTLVPALAKDPVFAFLDSAAADPGAGDEDRGRYSYLCADPWRVITAD CEEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECC DTTVRVDSRPVAGDPFAVLAATLAEIAEDEPVACPVPFATGLCGVLGYGLGAWLERLAPA CCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PADRLALPAMTLGVYDCVAAFDLRARKAWIVSSGRPERDPRRRAARALARAEALERRLAA CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH VSLVPDETAAAYEKTGSWRAERPRAAILAAIGKTIDAIEAGELFQANITQRFLADLPPGL HEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC DDLTLYRRLRRLSPAPFAALVGCGADHRLIGASPERFLRLGAEGRVETRPIKGTRRRDAD HHHHHHHHHHHCCCCCHHHHHCCCCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC PARDAAQAAALVASEKDRAENLMIVDLMRNDLGRVCAIGSVRVPRLIALESFASVHHLVS HHHHHHHHHHHHHCCHHHHCCEEEHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHH AVEGRLRPGLGAIDLLRACFPGGSVTGAPKIRAMDLITALEPARRGWYCGSVAWIGADGA HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCEEEECCCCC MDSNIVIRSLTRAGATLIAQAGGAITAPSDPAEEYEESLIKMAPLLSALDGIER CCCCHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]