| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592437
Identifier: 83592437
GI number: 83592437
Start: 1292422
End: 1294488
Strand: Reverse
Name: 83592437
Synonym: Rru_A1101
Alternate gene names: NA
Gene position: 1294488-1292422 (Counterclockwise)
Preceding gene: 83592445
Following gene: 83592417
Centisome position: 29.74
GC content: 68.89
Gene sequence:
>2067_bases ATGTCCTTCCCCCGTTCCCGCCCGGCCTTCGCCGCCGTCCTGCTGGCCGCCACGGCGCTGGCCTCGCCGGCTTTGGCCGA CGGGCCGCTGACCTTGAAGCGGGTGCTGCTGTCCACCGGTGGCGTCGGCCTGTTCGAATACGAAGCCAAGGTCGACGGAT CAACCGCCCTGCCTTTGACCGTTCGCCTTGATCAGGTCGATGACGTTTTGAAAAGCCTGAGCGTCGACGATCCCTCGGGC CGGCCGGCCAGCGTCCGTCTGGCGGTGCGCGAGCCGTTGTCCGAGGTGTTTCGCGATCTGCCCTTCGCCGAAGACGCCTT CCAGTCGCCCGCCGCCCTGTTCGAGGCCCTCAAGGGCGAACCGGTGACGATCAGCGGCCCGCAGGTGATGAGCGGACGGA TCGTTTCCGTTACCCCCGAAGTCACCACCCGCCCCGATGGCTCCGCGCAAACCCGCCATCGCCTGGGGCTGATGACCAAC GACGGCCTGCGCCAAGTCATTTTGGAAGACGCCCAGGGCGTGGCCTTCAGCGATTCGGCGCTGACCGCGCGCATCGAACG CGCCCTGGCCGCCATGGCCCATCTGCGCGAAAAGGACAGCCGCACCCTTGATATCGCCGTGGACGGCACGGGATCGCGGG CGGTCCGCGCCAGCTTCATCGCCGAGGTGCCGCTGTGGAAAGCCGGCTATCGCCTGACTTTGCCGGCGGAGGGTGCCAAC GCCAAGGAGAAGGCCAAGCTCGCCGGTTGGGCGGTGCTTGAAAACCTCAGCGGCCAGGACTGGAAGGACGTGAGCCTGAC CGTGGTCTCGGGCAATCCGGTGACTTTCCGCCAGGATCTGTTCACCCCCTATCGCATCGACCGGCCGACCGTTCCCGTCG AGGTTCAGGGCCGGGTGCTGCCCACCCCCGATAGCGGCGCCCAGCCCCAGGCCGACGCGGCGGCGGGGATGATGCGCAGC TTCGCCAAAAGCGCAACGCCGATGGCGATGGCCGCCGCCCCCGCCGCGCCCGACGAGGCGATGGCTGAATCCGGCCAATT GGCCTCCCCGGGCCTGGGTGGCGGACAGGCCGCCGCCCTGCCGTTGCCCAGCGAAGGCACGGCCCAGGTGCTGTTCACCC TGCCCCAGCCGGTCACCCTGGCCAATGGTCAGACGCTGATGGTACCGATTACCGAATCGGCGATCCCCTTGCGGCGGATC GCCCATTACCGCCCGGGCGAAAGCGGCCGCCATCCCTTGGCCGCCGTCGATCTTACCAACGCCACCGGCACCGCCCTGCC GCCGGGCGCGGTCAGCCTGACCCAGGCGACGAGCGGTGGTCTGGCCTATCTGGGCGATGCCCGCCTGGGCCCGGTCGCCA AGGGCGATCACCGCATTCTGGCCTTCGCCGTCGATCAGGATATCACGGTTGGCGAGGAGACCGGCGAGGACCGCACGGTG TCCGGGCTGACGGCTTCGGCGGGGGTTCTGACCCTGCGTCAGGTGGCGCGCAGCCAGACCACCTATACCCTGACCAATAA CGCCGGCGTCGAGCGTCGTCTGGTGATCGACCACCCCCGGCGCCCGGGCTGGATCCTGACCCCGCCCCAGGGTACCGATA CGGTCGAGGAAATCGGCGATGCCCACCGCCTGTCCGTCACCCTGGAGGCCGGACAAACCCGTGCGCTGACCATCGTTCTC GAACGGCCGATCGAAGAACGGCTGTCCGCCGGCGCCCTGACCGCGCCGCTGCTCGCCGGCCTCAGCGCGACGGGCAAACT TTCGGGCCCCGAGAAGCTGACGGTCGAACGCTTGGCCACCTTGTCGGCCCGGGCCTCGCAGATCGACGACCGCCTCGGCG CCATCCACACCGAAAGCGCCCAGGTGGTCGAGGATCAGGGGCGGCTGCGCGAAAACATCAAGGCGGTGCCGGCCGACAGC GACCTGCATCAGCGCTTTATGGAGCGTCTGGGCCAGCTTGAAGATCGCCTGGGCAGCCTTGAGCAGCAGGGCAAGGAGAT GGAGGCCGAGGCCCGCAAGGCCCGCGCCGATCTCGACGCCTATATCGCCGGCCTCACCCTGCCTTAA
Upstream 100 bases:
>100_bases CTAGCTTTCCTTGCGGGGCGGCCTTTTCCAAGCCCCATCCGCGGCGCGCTTGTTTTTACGCGATTTCCTTTTTCCGCCCA AGCCAACCGGAGACCCGACG
Downstream 100 bases:
>100_bases GCGCACCCCCTGGAGGGAGGCGGTACACCCCGCATCCCTCCAGGGCGCCTTGCTTACTGGCTGGCGGTTTCGATCACGGC GCAGATATCGCCGACCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MSFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLTVRLDQVDDVLKSLSVDDPSG RPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGEPVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTN DGLRQVILEDAQGVAFSDSALTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVLPTPDSGAQPQADAAAGMMRS FAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAALPLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRI AHYRPGESGRHPLAAVDLTNATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGDAHRLSVTLEAGQTRALTIVL ERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLATLSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADS DLHQRFMERLGQLEDRLGSLEQQGKEMEAEARKARADLDAYIAGLTLP
Sequences:
>Translated_688_residues MSFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLTVRLDQVDDVLKSLSVDDPSG RPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGEPVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTN DGLRQVILEDAQGVAFSDSALTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVLPTPDSGAQPQADAAAGMMRS FAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAALPLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRI AHYRPGESGRHPLAAVDLTNATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGDAHRLSVTLEAGQTRALTIVL ERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLATLSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADS DLHQRFMERLGQLEDRLGSLEQQGKEMEAEARKARADLDAYIAGLTLP >Mature_687_residues SFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLTVRLDQVDDVLKSLSVDDPSGR PASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGEPVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTND GLRQVILEDAQGVAFSDSALTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGANA KEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVLPTPDSGAQPQADAAAGMMRSF AKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAALPLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRIA HYRPGESGRHPLAAVDLTNATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTVS GLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGDAHRLSVTLEAGQTRALTIVLE RPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLATLSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADSD LHQRFMERLGQLEDRLGSLEQQGKEMEAEARKARADLDAYIAGLTLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72548; Mature: 72417
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLT CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEE VRLDQVDDVLKSLSVDDPSGRPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGE EEHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCC PVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTNDGLRQVILEDAQGVAFSDSA CEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCEECCHH LTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVL HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEHHHCCCCEECCCCCCCEEECCEEE PTPDSGAQPQADAAAGMMRSFAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEE PLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRIAHYRPGESGRHPLAAVDLTN CCCCCCCEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECC ATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV CCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEE SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGD CCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCHHHHCCC AHRLSVTLEAGQTRALTIVLERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLAT CEEEEEEEECCCCEEEEEEEECCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH LSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADSDLHQRFMERLGQLEDRLGSL HHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH EQQGKEMEAEARKARADLDAYIAGLTLP HHHCHHHHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure SFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLT CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEE VRLDQVDDVLKSLSVDDPSGRPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGE EEHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCC PVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTNDGLRQVILEDAQGVAFSDSA CEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCEECCHH LTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVL HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEHHHCCCCEECCCCCCCEEECCEEE PTPDSGAQPQADAAAGMMRSFAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAAL CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEE PLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRIAHYRPGESGRHPLAAVDLTN CCCCCCCEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECC ATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV CCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEE SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGD CCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCHHHHCCC AHRLSVTLEAGQTRALTIVLERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLAT CEEEEEEEECCCCEEEEEEEECCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH LSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADSDLHQRFMERLGQLEDRLGSL HHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH EQQGKEMEAEARKARADLDAYIAGLTLP HHHCHHHHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA