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The map label for this gene is tolR [H]

Identifier: 83592428

GI number: 83592428

Start: 1281084

End: 1281584

Strand: Direct

Name: tolR [H]

Synonym: Rru_A1092

Alternate gene names: 83592428

Gene position: 1281084-1281584 (Clockwise)

Preceding gene: 83592427

Following gene: 83592429

Centisome position: 29.43

GC content: 65.47

Gene sequence:

>501_bases
ATGGGTGCCTCGGTCCAACCCCGACGCGGCGGTCGCCGCAAGCGCAGTCACCAGATGAGCGACATCAACGTCACCCCGAT
GGTCGACGTGATGCTGGTCTTGCTGATTATCTTCATGGTGACGGCGCCTTTGCTCACCACCGGGGTCAAGGTCGACCTGC
CGCGCACCAGCGCGCCCTCGCTTGACCAGGACAATCAGTCGCTGACCGTTTCGGTCGGCGCCGATGGCACCTTGTATGTT
CAAGACAAGGTGACCGACGAAAGCGAACTGATGGCGCGGATGCAGGCGATCACCGGGGTCAATCCCGAAGCCCGCATCTA
TGTGCGCGGCGACGCCGGGATCAACTATGGCCGGGTGATGGAGGTGATGGGCATCCTGCGCTCCGCCGGTTACACCAAGG
TCGCCCTGGTAACCCAACCGGGCGCCCCGGGAGCGGCTCAGGCCAAGCCGGCCGCCACCGCTCCGGCGGCCAAGGCGCCG
GCCGCCAAGCCCAAGAATTAG

Upstream 100 bases:

>100_bases
TGCCGGCCGCCTGGAGGCGTTCTCCGGGGAATTCGGGGCGATCCTCGGCCGTCAGCTCGACGAGCGCGAGTAATCGGGCG
CCGATCAGGAGAACGATGAG

Downstream 100 bases:

>100_bases
CACGGGACAGCCGGCCTTGCCCCCGATAAAACGCGGTTTCCTCTATTCGCTCGGCTTCCATCTGCTGGTGGTGCTGCTGC
TGCTGGTTGGGGTGCCCCAT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MGASVQPRRGGRRKRSHQMSDINVTPMVDVMLVLLIIFMVTAPLLTTGVKVDLPRTSAPSLDQDNQSLTVSVGADGTLYV
QDKVTDESELMARMQAITGVNPEARIYVRGDAGINYGRVMEVMGILRSAGYTKVALVTQPGAPGAAQAKPAATAPAAKAP
AAKPKN

Sequences:

>Translated_166_residues
MGASVQPRRGGRRKRSHQMSDINVTPMVDVMLVLLIIFMVTAPLLTTGVKVDLPRTSAPSLDQDNQSLTVSVGADGTLYV
QDKVTDESELMARMQAITGVNPEARIYVRGDAGINYGRVMEVMGILRSAGYTKVALVTQPGAPGAAQAKPAATAPAAKAP
AAKPKN
>Mature_165_residues
GASVQPRRGGRRKRSHQMSDINVTPMVDVMLVLLIIFMVTAPLLTTGVKVDLPRTSAPSLDQDNQSLTVSVGADGTLYVQ
DKVTDESELMARMQAITGVNPEARIYVRGDAGINYGRVMEVMGILRSAGYTKVALVTQPGAPGAAQAKPAATAPAAKAPA
AKPKN

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=126, Percent_Identity=43.6507936507937, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 17487; Mature: 17355

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASVQPRRGGRRKRSHQMSDINVTPMVDVMLVLLIIFMVTAPLLTTGVKVDLPRTSAPS
CCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
LDQDNQSLTVSVGADGTLYVQDKVTDESELMARMQAITGVNPEARIYVRGDAGINYGRVM
CCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
EVMGILRSAGYTKVALVTQPGAPGAAQAKPAATAPAAKAPAAKPKN
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GASVQPRRGGRRKRSHQMSDINVTPMVDVMLVLLIIFMVTAPLLTTGVKVDLPRTSAPS
CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
LDQDNQSLTVSVGADGTLYVQDKVTDESELMARMQAITGVNPEARIYVRGDAGINYGRVM
CCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
EVMGILRSAGYTKVALVTQPGAPGAAQAKPAATAPAAKAPAAKPKN
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]