| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592429
Identifier: 83592429
GI number: 83592429
Start: 1281601
End: 1282626
Strand: Direct
Name: 83592429
Synonym: Rru_A1093
Alternate gene names: NA
Gene position: 1281601-1282626 (Clockwise)
Preceding gene: 83592428
Following gene: 83592430
Centisome position: 29.44
GC content: 66.28
Gene sequence:
>1026_bases TTGCCCCCGATAAAACGCGGTTTCCTCTATTCGCTCGGCTTCCATCTGCTGGTGGTGCTGCTGCTGCTGGTTGGGGTGCC CCATATTCGTAAGGACGTCACGCCGACCGAGCAGGTGACCATCGTCGAGTTGGTCGAAGTCAGCGACGAAACCACCTCGT TGCCCGATCAGCCCGCCGAAAAGGCCAAGCCGGTGCCCAAGCCCAAGGCCGCTCCGCCGCCGCCGGCGGCGGCCAAGGCC GTGGAAAAGCCCGTCGAGCCCAAACCCGAACCCAAGCCCGAGCCCAAGCCGGTGGTGCCGCCGCCCGAACCCGAGCCGCC GCCGCCCCCCGAGCCCGAGCCCGAGGAGGTTCCGCCGCCGCCCGAACCCGAGCCGACTCCCGAACCGATCAAGGAACAGC CCAAGCCCAAGCCCGAGCCGCCTAAGCCCGAGCCGCCCAAGCCCGTTCCCCCCAAGGTCGTTCCTCCCAAGGTCGAGCCC AAGCCGGCCGAGAAGAAGGCCGAGACCAAACCGGTGGAAAAGAAGGCCGAGAAGAAGCCCGAGAAGAAGAAGGACGACTT CGACTCGTTGCTTTCGGCGGTCAATCAGCTTGAAAAGAAGGTCGAGAAGCCGGGCAAGGGCAAACAGGCCGACGCGGCGT CGACCGAGGAGGAGGCGACTCCCCAGCCCCAGGCGGCGCGGCCGACCAATCAGGGCGGGCGGATTTCCAACACGCTGACG ATGAGCGAGATCGACTCGATCCGCTATCACGTCGAGCAGCGCTGGAACTATAACCAGGGGGGACGCGGGGTCGAGGGCAT GAGCGTCGATGTCCAAGTCAGCATCAATCCCGATGGTTCGGTCGCCCGGGCCAAGGCCTTGCGCGATCCGGCCTTCGCCG GCGACGCGGTCTATAAGGCCCTGGCCGATAGCGCCGAGCGGGCGGTGATGCGCGCCAGCCCGTTGCCGGTGCCGCGCGAC AAGTTCGATATGTTCGCCGACGGCTTCACGCTGCGCTTCGCTCCGACCGGCATCAACTTCAATTGA
Upstream 100 bases:
>100_bases CCGGGCGCCCCGGGAGCGGCTCAGGCCAAGCCGGCCGCCACCGCTCCGGCGGCCAAGGCGCCGGCCGCCAAGCCCAAGAA TTAGCACGGGACAGCCGGCC
Downstream 100 bases:
>100_bases GGCCGGTCTCCCGCGCCGACCGGCGCGGGGGCCTTGGCGATGCCATGATTTTGGGTGACCATGGCCTCGTTGACCTGCGG GGCCATCGGCCTATCTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPPIKRGFLYSLGFHLLVVLLLLVGVPHIRKDVTPTEQVTIVELVEVSDETTSLPDQPAEKAKPVPKPKAAPPPPAAAKA VEKPVEPKPEPKPEPKPVVPPPEPEPPPPPEPEPEEVPPPPEPEPTPEPIKEQPKPKPEPPKPEPPKPVPPKVVPPKVEP KPAEKKAETKPVEKKAEKKPEKKKDDFDSLLSAVNQLEKKVEKPGKGKQADAASTEEEATPQPQAARPTNQGGRISNTLT MSEIDSIRYHVEQRWNYNQGGRGVEGMSVDVQVSINPDGSVARAKALRDPAFAGDAVYKALADSAERAVMRASPLPVPRD KFDMFADGFTLRFAPTGINFN
Sequences:
>Translated_341_residues MPPIKRGFLYSLGFHLLVVLLLLVGVPHIRKDVTPTEQVTIVELVEVSDETTSLPDQPAEKAKPVPKPKAAPPPPAAAKA VEKPVEPKPEPKPEPKPVVPPPEPEPPPPPEPEPEEVPPPPEPEPTPEPIKEQPKPKPEPPKPEPPKPVPPKVVPPKVEP KPAEKKAETKPVEKKAEKKPEKKKDDFDSLLSAVNQLEKKVEKPGKGKQADAASTEEEATPQPQAARPTNQGGRISNTLT MSEIDSIRYHVEQRWNYNQGGRGVEGMSVDVQVSINPDGSVARAKALRDPAFAGDAVYKALADSAERAVMRASPLPVPRD KFDMFADGFTLRFAPTGINFN >Mature_340_residues PPIKRGFLYSLGFHLLVVLLLLVGVPHIRKDVTPTEQVTIVELVEVSDETTSLPDQPAEKAKPVPKPKAAPPPPAAAKAV EKPVEPKPEPKPEPKPVVPPPEPEPPPPPEPEPEEVPPPPEPEPTPEPIKEQPKPKPEPPKPEPPKPVPPKVVPPKVEPK PAEKKAETKPVEKKAEKKPEKKKDDFDSLLSAVNQLEKKVEKPGKGKQADAASTEEEATPQPQAARPTNQGGRISNTLTM SEIDSIRYHVEQRWNYNQGGRGVEGMSVDVQVSINPDGSVARAKALRDPAFAGDAVYKALADSAERAVMRASPLPVPRDK FDMFADGFTLRFAPTGINFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37066; Mature: 36934
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPIKRGFLYSLGFHLLVVLLLLVGVPHIRKDVTPTEQVTIVELVEVSDETTSLPDQPAE CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHEEEEHHHHHCCHHCCCCCCCHH KAKPVPKPKAAPPPPAAAKAVEKPVEPKPEPKPEPKPVVPPPEPEPPPPPEPEPEEVPPP HCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPEPTPEPIKEQPKPKPEPPKPEPPKPVPPKVVPPKVEPKPAEKKAETKPVEKKAEKKP CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCC EKKKDDFDSLLSAVNQLEKKVEKPGKGKQADAASTEEEATPQPQAARPTNQGGRISNTLT CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEE MSEIDSIRYHVEQRWNYNQGGRGVEGMSVDVQVSINPDGSVARAKALRDPAFAGDAVYKA HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHH LADSAERAVMRASPLPVPRDKFDMFADGFTLRFAPTGINFN HHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCC >Mature Secondary Structure PPIKRGFLYSLGFHLLVVLLLLVGVPHIRKDVTPTEQVTIVELVEVSDETTSLPDQPAE CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHEEEEHHHHHCCHHCCCCCCCHH KAKPVPKPKAAPPPPAAAKAVEKPVEPKPEPKPEPKPVVPPPEPEPPPPPEPEPEEVPPP HCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPEPTPEPIKEQPKPKPEPPKPEPPKPVPPKVVPPKVEPKPAEKKAETKPVEKKAEKKP CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCC EKKKDDFDSLLSAVNQLEKKVEKPGKGKQADAASTEEEATPQPQAARPTNQGGRISNTLT CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEE MSEIDSIRYHVEQRWNYNQGGRGVEGMSVDVQVSINPDGSVARAKALRDPAFAGDAVYKA HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHH LADSAERAVMRASPLPVPRDKFDMFADGFTLRFAPTGINFN HHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA