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The map label for this gene is higB-1 [H]

Identifier: 83592400

GI number: 83592400

Start: 1255763

End: 1256059

Strand: Direct

Name: higB-1 [H]

Synonym: Rru_A1064

Alternate gene names: 83592400

Gene position: 1255763-1256059 (Clockwise)

Preceding gene: 83592399

Following gene: 83592401

Centisome position: 28.85

GC content: 53.87

Gene sequence:

>297_bases
ATGATCGTTGGATTTCGCGATGAATGGCTGCGGGCCTTTTTCGTGGAGGATATCCACTGCCGCAGTATTCCTGCCGATCT
CGAAAGCCGATTGTTCCGAAAGCTCCAGATGATCGACGATGCGATGACCGATCAGGATTTGCGCGTGCCGCCCAGCAATC
ATTTCGAAAAACTACATGGCATCCTTGATGGCCTGTATTCGATTCGCGTCAACAAGCAATGGCGGCTGATCTTTCGATGG
GACGGCGGTCGCGGCGAAGCGTCGGGCATTTATCTCGACGACCACGGTTATCGGTGA

Upstream 100 bases:

>100_bases
ACCCGATGATCCTTCGCCGGCTTTGACGAAGAGCGATGGAAAAGACGGTGTGGAAAGTCCCATGGAGTGGTACATTGACT
CGGTTGTTGGGGGGTAAGGC

Downstream 100 bases:

>100_bases
GGTGACAGATGATGATGACCAAGCGCAAGCCGGTGACGGTCGGGGAAATCCTGGTGGAAGAGTTCATGGGGCCGCTTGGC
CTGACGCAGGCGGCGCTGGC

Product: plasmid maintenance system killer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MIVGFRDEWLRAFFVEDIHCRSIPADLESRLFRKLQMIDDAMTDQDLRVPPSNHFEKLHGILDGLYSIRVNKQWRLIFRW
DGGRGEASGIYLDDHGYR

Sequences:

>Translated_98_residues
MIVGFRDEWLRAFFVEDIHCRSIPADLESRLFRKLQMIDDAMTDQDLRVPPSNHFEKLHGILDGLYSIRVNKQWRLIFRW
DGGRGEASGIYLDDHGYR
>Mature_98_residues
MIVGFRDEWLRAFFVEDIHCRSIPADLESRLFRKLQMIDDAMTDQDLRVPPSNHFEKLHGILDGLYSIRVNKQWRLIFRW
DGGRGEASGIYLDDHGYR

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG3549

COG function: function code R; Plasmid maintenance system killer protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007711 [H]

Pfam domain/function: PF05015 Plasmid_killer [H]

EC number: NA

Molecular weight: Translated: 11623; Mature: 11623

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVGFRDEWLRAFFVEDIHCRSIPADLESRLFRKLQMIDDAMTDQDLRVPPSNHFEKLHG
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
ILDGLYSIRVNKQWRLIFRWDGGRGEASGIYLDDHGYR
HHHHHHHEEECCCEEEEEEECCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MIVGFRDEWLRAFFVEDIHCRSIPADLESRLFRKLQMIDDAMTDQDLRVPPSNHFEKLHG
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
ILDGLYSIRVNKQWRLIFRWDGGRGEASGIYLDDHGYR
HHHHHHHEEECCCEEEEEEECCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]