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The map label for this gene is ycjJ [C]

Identifier: 83592366

GI number: 83592366

Start: 1219044

End: 1220468

Strand: Reverse

Name: ycjJ [C]

Synonym: Rru_A1030

Alternate gene names: 83592366

Gene position: 1220468-1219044 (Counterclockwise)

Preceding gene: 83592367

Following gene: 83592365

Centisome position: 28.04

GC content: 63.44

Gene sequence:

>1425_bases
ATGACCTTGTCGATCAAACCCACGCTCAAGAAAAGCCTGAGCGGGCTCCACCTGTGGGGCATCGCCGTCGGGCTGGTGAT
TTCAGGGGAATACTTCGGCTGGAGCTACGGCTGGGATCAGGCCGGAACGCTGGGCTTTCTGGTGACCACCATCCTGATCG
CCGTGATGTACACCACCTTTATCTTCAGCTTCACCGAGTTGACCACGGCCATTCCCCATGCCGGCGGCCCCTTTGCCTAT
AGCTACCGCGCCTTCGGCCCGCTGGGCGGCTTCCTGGCCGGCTTTGCCACCTTGATCGAATTCGTCTTCGCCCCGCCGGC
GATTTCGCTGGCGATCGGCGCCTATCTCAATGTCCAGTTCCCCGGACTTGATCCCAAGCTAGCCGCCGTCGGCGCCTATG
TCGTGTTCATGGCGCTCAATATCGCCGGGGTCACCATCGCCGCCACCTTCGAATTGCTGGTGACGGTTCTGGCCATCGCC
GAATTGCTGGTGTTCATGGGCGTGGTTTCGCCGGGCTTCTCGTTTACCAATTTCGTCGCCAACGGCTGGTCGGGCGAAAG
CGGTTTCTCGTTCGGATCGCTCTCGGGCATCTTCGCGGCCATTCCCTTCGCCATCTGGTTCTTCCTGGCGATCGAAGGGG
CGGCGATGGCGGCCGAGGAAACCAAGGATCCGCGCACCACCGTTCCCAAGGCCTATATCGCTGGCATCCTGACCCTGGTT
TTCCTGGCCTTCGGCACGATGATCTTCGCCGGCGGCGTTGGCGACTGGAAGGCGCTGTCCAACATCAACGACCCGCTGCC
CCAGGCGATGAAGGTGGTGGTCGGCGAGTCCAGCGGCTGGTTGCACATGCTGGTGTGGATCGGCCTGTTTGGCCTGATCG
CCTCGTTCCACGGCATCATCATGGGCTATTCGCGCCAGATCTTCGCCCTCGCCCGCGCCGGCTTCCTGCCCGCCGTCTTC
TCCACCGTCCATCCCTCGCGCAAGACGCCCCATTGGGCGATCCTCGCCGGCGGCGTCATCGGCATCGCCGCCATCTTCTC
GGACTCGTTCATTTCCATCGGCGGCCTGCCTTTGACCGCCAATATCGTCACCATGTCGGTCTTTGGCGCCATCGTCATGT
ACATCATGAGCATGGCCGCCCTCTTCCGCCTGCGCCAGAGCGAGCCGGCCCTCGACCGTCCCTTCCGCGCCCCGTTCTAT
CCGGTGTTTCCGGCGATCGCCCTGGCCATGGCGGTGGTCGCCCTGATCACCATGATCTACTTCAACCCGATGGTCTTTGG
CCTGTTCGTCGGGCTGATGGCAGCGGGCTGGCTGTTCTACCGCTTCACCGCCCATCTGCGCGCCGCCGCCCCGGGCGACG
GCCTGCTATCGGTCGGCGGCATCGAGACCATCGCCCAGACCGAAGCGCGCAGCTTGGTCGACTAA

Upstream 100 bases:

>100_bases
TCGGGCTCAAGGAAGAGGCTCAGCCCCGCCTCGGGGCCGGTGAGGGGGGAAACCTACCGCCTGTCCTCGACCCGTCCGAC
CGCTTAGGAGAGTTATCGTC

Downstream 100 bases:

>100_bases
GCGGCCGGGATCATCCTTGGCCCGGGCTTTGCAAAGATATCCCCGACCGTTTCGACGGCCCCGCGACAGGCGCGGGGCCG
TTGGCCTTTATCGGCGAGGC

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MTLSIKPTLKKSLSGLHLWGIAVGLVISGEYFGWSYGWDQAGTLGFLVTTILIAVMYTTFIFSFTELTTAIPHAGGPFAY
SYRAFGPLGGFLAGFATLIEFVFAPPAISLAIGAYLNVQFPGLDPKLAAVGAYVVFMALNIAGVTIAATFELLVTVLAIA
ELLVFMGVVSPGFSFTNFVANGWSGESGFSFGSLSGIFAAIPFAIWFFLAIEGAAMAAEETKDPRTTVPKAYIAGILTLV
FLAFGTMIFAGGVGDWKALSNINDPLPQAMKVVVGESSGWLHMLVWIGLFGLIASFHGIIMGYSRQIFALARAGFLPAVF
STVHPSRKTPHWAILAGGVIGIAAIFSDSFISIGGLPLTANIVTMSVFGAIVMYIMSMAALFRLRQSEPALDRPFRAPFY
PVFPAIALAMAVVALITMIYFNPMVFGLFVGLMAAGWLFYRFTAHLRAAAPGDGLLSVGGIETIAQTEARSLVD

Sequences:

>Translated_474_residues
MTLSIKPTLKKSLSGLHLWGIAVGLVISGEYFGWSYGWDQAGTLGFLVTTILIAVMYTTFIFSFTELTTAIPHAGGPFAY
SYRAFGPLGGFLAGFATLIEFVFAPPAISLAIGAYLNVQFPGLDPKLAAVGAYVVFMALNIAGVTIAATFELLVTVLAIA
ELLVFMGVVSPGFSFTNFVANGWSGESGFSFGSLSGIFAAIPFAIWFFLAIEGAAMAAEETKDPRTTVPKAYIAGILTLV
FLAFGTMIFAGGVGDWKALSNINDPLPQAMKVVVGESSGWLHMLVWIGLFGLIASFHGIIMGYSRQIFALARAGFLPAVF
STVHPSRKTPHWAILAGGVIGIAAIFSDSFISIGGLPLTANIVTMSVFGAIVMYIMSMAALFRLRQSEPALDRPFRAPFY
PVFPAIALAMAVVALITMIYFNPMVFGLFVGLMAAGWLFYRFTAHLRAAAPGDGLLSVGGIETIAQTEARSLVD
>Mature_473_residues
TLSIKPTLKKSLSGLHLWGIAVGLVISGEYFGWSYGWDQAGTLGFLVTTILIAVMYTTFIFSFTELTTAIPHAGGPFAYS
YRAFGPLGGFLAGFATLIEFVFAPPAISLAIGAYLNVQFPGLDPKLAAVGAYVVFMALNIAGVTIAATFELLVTVLAIAE
LLVFMGVVSPGFSFTNFVANGWSGESGFSFGSLSGIFAAIPFAIWFFLAIEGAAMAAEETKDPRTTVPKAYIAGILTLVF
LAFGTMIFAGGVGDWKALSNINDPLPQAMKVVVGESSGWLHMLVWIGLFGLIASFHGIIMGYSRQIFALARAGFLPAVFS
TVHPSRKTPHWAILAGGVIGIAAIFSDSFISIGGLPLTANIVTMSVFGAIVMYIMSMAALFRLRQSEPALDRPFRAPFYP
VFPAIALAMAVVALITMIYFNPMVFGLFVGLMAAGWLFYRFTAHLRAAAPGDGLLSVGGIETIAQTEARSLVD

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=358, Percent_Identity=25.6983240223464, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI33286428, Length=458, Percent_Identity=24.8908296943231, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI87081869, Length=387, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI87082250, Length=371, Percent_Identity=24.5283018867925, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082023, Length=393, Percent_Identity=24.6819338422392, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786602, Length=465, Percent_Identity=21.0752688172043, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1786789, Length=440, Percent_Identity=22.7272727272727, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081708, Length=448, Percent_Identity=23.2142857142857, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI2367353, Length=339, Percent_Identity=25.6637168141593, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790653, Length=340, Percent_Identity=24.4117647058824, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1786302, Length=450, Percent_Identity=20.6666666666667, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71982612, Length=422, Percent_Identity=24.8815165876777, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71982608, Length=418, Percent_Identity=24.8803827751196, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24667468, Length=335, Percent_Identity=25.3731343283582, Blast_Score=82, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24666159, Length=379, Percent_Identity=26.9129287598945, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI221512776, Length=379, Percent_Identity=26.9129287598945, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI221331183, Length=459, Percent_Identity=25.0544662309368, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17647653, Length=459, Percent_Identity=25.0544662309368, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24664379, Length=459, Percent_Identity=25.0544662309368, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50359; Mature: 50228

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSIKPTLKKSLSGLHLWGIAVGLVISGEYFGWSYGWDQAGTLGFLVTTILIAVMYTTF
CCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IFSFTELTTAIPHAGGPFAYSYRAFGPLGGFLAGFATLIEFVFAPPAISLAIGAYLNVQF
HHHHHHHHHHCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEC
PGLDPKLAAVGAYVVFMALNIAGVTIAATFELLVTVLAIAELLVFMGVVSPGFSFTNFVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
NGWSGESGFSFGSLSGIFAAIPFAIWFFLAIEGAAMAAEETKDPRTTVPKAYIAGILTLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
FLAFGTMIFAGGVGDWKALSNINDPLPQAMKVVVGESSGWLHMLVWIGLFGLIASFHGII
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MGYSRQIFALARAGFLPAVFSTVHPSRKTPHWAILAGGVIGIAAIFSDSFISIGGLPLTA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCHHEECCCCHHH
NIVTMSVFGAIVMYIMSMAALFRLRQSEPALDRPFRAPFYPVFPAIALAMAVVALITMIY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FNPMVFGLFVGLMAAGWLFYRFTAHLRAAAPGDGLLSVGGIETIAQTEARSLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLSIKPTLKKSLSGLHLWGIAVGLVISGEYFGWSYGWDQAGTLGFLVTTILIAVMYTTF
CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IFSFTELTTAIPHAGGPFAYSYRAFGPLGGFLAGFATLIEFVFAPPAISLAIGAYLNVQF
HHHHHHHHHHCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEC
PGLDPKLAAVGAYVVFMALNIAGVTIAATFELLVTVLAIAELLVFMGVVSPGFSFTNFVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
NGWSGESGFSFGSLSGIFAAIPFAIWFFLAIEGAAMAAEETKDPRTTVPKAYIAGILTLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
FLAFGTMIFAGGVGDWKALSNINDPLPQAMKVVVGESSGWLHMLVWIGLFGLIASFHGII
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MGYSRQIFALARAGFLPAVFSTVHPSRKTPHWAILAGGVIGIAAIFSDSFISIGGLPLTA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCHHEECCCCHHH
NIVTMSVFGAIVMYIMSMAALFRLRQSEPALDRPFRAPFYPVFPAIALAMAVVALITMIY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FNPMVFGLFVGLMAAGWLFYRFTAHLRAAAPGDGLLSVGGIETIAQTEARSLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]