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The map label for this gene is pduA [H]

Identifier: 83592241

GI number: 83592241

Start: 1082129

End: 1082425

Strand: Direct

Name: pduA [H]

Synonym: Rru_A0905

Alternate gene names: 83592241

Gene position: 1082129-1082425 (Clockwise)

Preceding gene: 83592240

Following gene: 83592242

Centisome position: 24.86

GC content: 64.31

Gene sequence:

>297_bases
ATGCAACAAGAAGCCTTGGGCATGGTGGAAACCAAAGGACTGGTCGGTGCGATCGAAGCGGCCGACGCCATGGTGAAATC
GGCGAACGTGGTCCTGATGGGCTACGAGAAGATCGGCTCGGGTCTGGTGACCGTGATGGTTCGCGGTGACGTGGGCGCGG
TGAAGGCGGCGACGGATGCCGGCGCCGTGGCGGCCTCGAAGATCGGTGAAGTCGTGTCCGTCCACGTCATCCCGCGGCCC
CACACCGAAGTGGAAAAGATCCTGCCGCGCGGCCTCTCCGCTTCGGCGGCCCAATAA

Upstream 100 bases:

>100_bases
GAGCTGATCGGCGCGGTTACCGGTTGAGAGTCTCGCCTTCCCGCCAGCGGGAACCAGCGATCCGACAGTGAACACTTGAG
AACAAGACGAGGGAAAAACG

Downstream 100 bases:

>100_bases
GCACCCCGATCAGGACAGGAGGGATTTGCCGTGAAAGACGATCTAGTCGAAAGACTCCTTGGCGAAGTCATTAAGAAGAT
GGGCGGCAGCGAGCCCCAGG

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MQQEALGMVETKGLVGAIEAADAMVKSANVVLMGYEKIGSGLVTVMVRGDVGAVKAATDAGAVAASKIGEVVSVHVIPRP
HTEVEKILPRGLSASAAQ

Sequences:

>Translated_98_residues
MQQEALGMVETKGLVGAIEAADAMVKSANVVLMGYEKIGSGLVTVMVRGDVGAVKAATDAGAVAASKIGEVVSVHVIPRP
HTEVEKILPRGLSASAAQ
>Mature_98_residues
MQQEALGMVETKGLVGAIEAADAMVKSANVVLMGYEKIGSGLVTVMVRGDVGAVKAATDAGAVAASKIGEVVSVHVIPRP
HTEVEKILPRGLSASAAQ

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=95, Percent_Identity=64.2105263157895, Blast_Score=106, Evalue=3e-25,
Organism=Escherichia coli, GI87082105, Length=84, Percent_Identity=45.2380952380952, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9911; Mature: 9911

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEALGMVETKGLVGAIEAADAMVKSANVVLMGYEKIGSGLVTVMVRGDVGAVKAATDA
CCCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCC
GAVAASKIGEVVSVHVIPRPHTEVEKILPRGLSASAAQ
CHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQQEALGMVETKGLVGAIEAADAMVKSANVVLMGYEKIGSGLVTVMVRGDVGAVKAATDA
CCCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCC
GAVAASKIGEVVSVHVIPRPHTEVEKILPRGLSASAAQ
CHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]