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The map label for this gene is aapJ [H]

Identifier: 83592118

GI number: 83592118

Start: 931092

End: 932144

Strand: Direct

Name: aapJ [H]

Synonym: Rru_A0779

Alternate gene names: 83592118

Gene position: 931092-932144 (Clockwise)

Preceding gene: 83592117

Following gene: 83592119

Centisome position: 21.39

GC content: 62.39

Gene sequence:

>1053_bases
ATGGTCAAGCAGTTGAAAAAAATCGCTTTCAAGGCCCAAGCCGCCGGTCTCGCCGCCGCCCTGGCCTTATGCGGGCTGGG
ATTTTCCTCCTCGGCCGAGGCTGGCGAGACCCTGGACGCCATCAAGGCGCGCGGGGTCATCAAGATCGGCGTCGGCGGAA
ATTCTCCGGGCTTTTCGGCGCCTGACAGCGCCGGTCGCTGGCAGGGCTTTTTCATCGATATCGGCCGCGCCCTGGCGGTG
ACGGTGTTCAATGATCCCGAGAAGGCCGAATTCGTCAATTCCTCGCCCCAGCAACGCCTGCCGGCCCTGCAATCGGGCGA
ATTCGATATCTTGCTGTCGGGCGTGACCCAGACCATCACCCGGGCGACCAAGCTGGGCTTCCATTTCGGCCCGGTGGTCT
TCTACGACGGCCAGGGATTGCTGGTGCCCAAGAAGCTGGGGATCACCAAGGGCAGCGAGCTTGATGGCGCCACCGTCTGC
GTGCAGACGGGTACGACGGGCGAGTTGAACATCGCCGACTTCTTCCGCCAGCATAAAATCTCGTTCAAGCCGGTGGTGAT
CGAGGAGTCCAACGAGTTCCTCAAGGCCTTTGCGTCGGGACGCTGCGACGTGCTGACCCAGGACAGCTCCGATCTGGCGA
TCCGCCGCACCTTGCTGCCCAATGCCGCCGATTATGTGCTGCTGCCCGAGCGCATCTCCAAGGAACCGCTGGCTCCGGCC
ATCCGCTATGGCGATGACCGCTGGCTGGAAATCGTCAACTGGACGGTCTACGCCCTGATCGAGGCCGAGGAATTGGGCAT
CACCCAGGCCACTATCGACAGCTTCCTTGGCAGCGATAATCCGAGCATCCGCCGCTTCCTGGGCGTTGATCCCAGTCTGG
CCGAGGCCACCGGCCTCGATGCCAAATTCGCCTATAACATCATCAAGGCCCTGGGCAATTACGGCGAGGTGTTCGAACGC
TCGGTCGGCAAGGCCAGCAAGCTCGGCTTCGAACGGGGCTATAACCAGCCCTGGACCCAAGGCGGCTTGCTGTATTCGCC
GCCGTTCCGCTGA

Upstream 100 bases:

>100_bases
GTTGTACGATCGGGTAAATATCTTTTTTCGTCGGTCCCGGCCTAAGCCCGGTATCGCGGTTTCCTAACACGCGTCCCGTC
CCAGGAAACACAGGTGAACA

Downstream 100 bases:

>100_bases
TCCATGCGCGCCCTCGGTCGCAAGATAACCTGGATATTGGCCGCTTGGTGGGGCGAGCGGCCCTTGTCCCAACTCGCGGT
GTTGCTCGGCGTCTTCGCCC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MVKQLKKIAFKAQAAGLAAALALCGLGFSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAV
TVFNDPEKAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLGITKGSELDGATVC
VQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQDSSDLAIRRTLLPNAADYVLLPERISKEPLAPA
IRYGDDRWLEIVNWTVYALIEAEELGITQATIDSFLGSDNPSIRRFLGVDPSLAEATGLDAKFAYNIIKALGNYGEVFER
SVGKASKLGFERGYNQPWTQGGLLYSPPFR

Sequences:

>Translated_350_residues
MVKQLKKIAFKAQAAGLAAALALCGLGFSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAV
TVFNDPEKAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLGITKGSELDGATVC
VQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQDSSDLAIRRTLLPNAADYVLLPERISKEPLAPA
IRYGDDRWLEIVNWTVYALIEAEELGITQATIDSFLGSDNPSIRRFLGVDPSLAEATGLDAKFAYNIIKALGNYGEVFER
SVGKASKLGFERGYNQPWTQGGLLYSPPFR
>Mature_350_residues
MVKQLKKIAFKAQAAGLAAALALCGLGFSSSAEAGETLDAIKARGVIKIGVGGNSPGFSAPDSAGRWQGFFIDIGRALAV
TVFNDPEKAEFVNSSPQQRLPALQSGEFDILLSGVTQTITRATKLGFHFGPVVFYDGQGLLVPKKLGITKGSELDGATVC
VQTGTTGELNIADFFRQHKISFKPVVIEESNEFLKAFASGRCDVLTQDSSDLAIRRTLLPNAADYVLLPERISKEPLAPA
IRYGDDRWLEIVNWTVYALIEAEELGITQATIDSFLGSDNPSIRRFLGVDPSLAEATGLDAKFAYNIIKALGNYGEVFER
SVGKASKLGFERGYNQPWTQGGLLYSPPFR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=226, Percent_Identity=24.7787610619469, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 37704; Mature: 37704

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQLKKIAFKAQAAGLAAALALCGLGFSSSAEAGETLDAIKARGVIKIGVGGNSPGFSA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCC
PDSAGRWQGFFIDIGRALAVTVFNDPEKAEFVNSSPQQRLPALQSGEFDILLSGVTQTIT
CCCCCCCEEEEEEECCEEEEEEECCCHHHHHCCCCHHHHCCCCCCCCEEEEEHHHHHHHH
RATKLGFHFGPVVFYDGQGLLVPKKLGITKGSELDGATVCVQTGTTGELNIADFFRQHKI
HHHHCCCEECCEEEECCCEEEEEHHCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHCC
SFKPVVIEESNEFLKAFASGRCDVLTQDSSDLAIRRTLLPNAADYVLLPERISKEPLAPA
CCCEEEEECCHHHHHHHHCCCCEEEECCCCCCEEHHHHCCCCCCEEEECHHHCCCCCCHH
IRYGDDRWLEIVNWTVYALIEAEELGITQATIDSFLGSDNPSIRRFLGVDPSLAEATGLD
HHCCCHHHEEEEEEEEEEEEEHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCC
AKFAYNIIKALGNYGEVFERSVGKASKLGFERGYNQPWTQGGLLYSPPFR
HHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MVKQLKKIAFKAQAAGLAAALALCGLGFSSSAEAGETLDAIKARGVIKIGVGGNSPGFSA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCC
PDSAGRWQGFFIDIGRALAVTVFNDPEKAEFVNSSPQQRLPALQSGEFDILLSGVTQTIT
CCCCCCCEEEEEEECCEEEEEEECCCHHHHHCCCCHHHHCCCCCCCCEEEEEHHHHHHHH
RATKLGFHFGPVVFYDGQGLLVPKKLGITKGSELDGATVCVQTGTTGELNIADFFRQHKI
HHHHCCCEECCEEEECCCEEEEEHHCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHCC
SFKPVVIEESNEFLKAFASGRCDVLTQDSSDLAIRRTLLPNAADYVLLPERISKEPLAPA
CCCEEEEECCHHHHHHHHCCCCEEEECCCCCCEEHHHHCCCCCCEEEECHHHCCCCCCHH
IRYGDDRWLEIVNWTVYALIEAEELGITQATIDSFLGSDNPSIRRFLGVDPSLAEATGLD
HHCCCHHHEEEEEEEEEEEEEHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCC
AKFAYNIIKALGNYGEVFERSVGKASKLGFERGYNQPWTQGGLLYSPPFR
HHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]