Click here to switch to the map view.

The map label for this gene is metQ [H]

Identifier: 83592117

GI number: 83592117

Start: 930140

End: 930946

Strand: Direct

Name: metQ [H]

Synonym: Rru_A0778

Alternate gene names: 83592117

Gene position: 930140-930946 (Clockwise)

Preceding gene: 83592116

Following gene: 83592118

Centisome position: 21.37

GC content: 63.69

Gene sequence:

>807_bases
ATGAGGATGGCGAAGATCGTGCGAGTACCCGCCCTTCGCGTGGCCTTGGCTGGGGCGCTGCTGGTCCTTGGCCTTGGCCC
TTGCCTAGCGCAAACCATCCGCCTGGGCGTCACCCCCGGCCCCCATGCCCAGATCGCCGAGGCTGTGGTGCCGGTGGCCC
GCGCCCAGGGGCTTGAGGTCAAGGTGATCGAATTCAGCGACGGCACCTTGATCAACGCCGCCACCAATGAAGGGGAGCTG
GAGGCCAACGCTTTTCAGCATGGTCCCTATCTTGAAGGCCAGATCAAGGATCGCGGCTATGATCTGGTGTCGATCGCCAA
GACCGTGCTGCTGCCGATGGCGGCCTATTCCAAGCGCGTCGCCGCCCTTGGCGACCTGCCGCAAAAGGCCAAGGTATCCA
TCCCCAATGATCCGACCAATGGCGGCCGGGCGCTCAAGCTGCTGGAGGCCGGGGGCCTGCTGACCCTCAAGCCCGGCCTG
GGCTTCGCCTCGACGGTCTTCGATATCGACAGCAACCCCAAGAACCTGCGGATTCTGGAGCTGGAAGCGACCCAGGTGCC
GCGCTCGCTTGACGATGTCGATCTCGCCGTCATCAACACCAATTACGCCCTGGCCACCGGCCTTGATCCTTTGCGGGATT
CGCTGCTGCGCGAAGGCGATCTGTCGCAATACTTCTGCCTGATCGCCGTTCGCCGCCAGGATGCCGATCAACCCTGGGCC
AAGGTTCTGCGCCAGTCGTTTCTCTCCCCCGAGGTCAAGGCCTTCGTCGCCACCACCTTCCACGGCAATATTCTTGCCGG
CTGGTAG

Upstream 100 bases:

>100_bases
GCGGCCTCAAGGCGACGCTCGATCCCCACGGCCTGCTCAATCCGGGCAAGATCTTTCCCGATGCCGTCGATTCCCCCCGC
GAGACGAGGAGCGTTTTTCC

Downstream 100 bases:

>100_bases
GGGCGGAGCGGCGGTTCGGCGGGTTTTTTTTAGACAAAAATTCTAGTTGTACGATCGGGTAAATATCTTTTTTCGTCGGT
CCCGGCCTAAGCCCGGTATC

Product: lipoprotein YaeC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRMAKIVRVPALRVALAGALLVLGLGPCLAQTIRLGVTPGPHAQIAEAVVPVARAQGLEVKVIEFSDGTLINAATNEGEL
EANAFQHGPYLEGQIKDRGYDLVSIAKTVLLPMAAYSKRVAALGDLPQKAKVSIPNDPTNGGRALKLLEAGGLLTLKPGL
GFASTVFDIDSNPKNLRILELEATQVPRSLDDVDLAVINTNYALATGLDPLRDSLLREGDLSQYFCLIAVRRQDADQPWA
KVLRQSFLSPEVKAFVATTFHGNILAGW

Sequences:

>Translated_268_residues
MRMAKIVRVPALRVALAGALLVLGLGPCLAQTIRLGVTPGPHAQIAEAVVPVARAQGLEVKVIEFSDGTLINAATNEGEL
EANAFQHGPYLEGQIKDRGYDLVSIAKTVLLPMAAYSKRVAALGDLPQKAKVSIPNDPTNGGRALKLLEAGGLLTLKPGL
GFASTVFDIDSNPKNLRILELEATQVPRSLDDVDLAVINTNYALATGLDPLRDSLLREGDLSQYFCLIAVRRQDADQPWA
KVLRQSFLSPEVKAFVATTFHGNILAGW
>Mature_268_residues
MRMAKIVRVPALRVALAGALLVLGLGPCLAQTIRLGVTPGPHAQIAEAVVPVARAQGLEVKVIEFSDGTLINAATNEGEL
EANAFQHGPYLEGQIKDRGYDLVSIAKTVLLPMAAYSKRVAALGDLPQKAKVSIPNDPTNGGRALKLLEAGGLLTLKPGL
GFASTVFDIDSNPKNLRILELEATQVPRSLDDVDLAVINTNYALATGLDPLRDSLLREGDLSQYFCLIAVRRQDADQPWA
KVLRQSFLSPEVKAFVATTFHGNILAGW

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=259, Percent_Identity=44.4015444015444, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1790093, Length=242, Percent_Identity=43.801652892562, Blast_Score=200, Evalue=8e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28666; Mature: 28666

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMAKIVRVPALRVALAGALLVLGLGPCLAQTIRLGVTPGPHAQIAEAVVPVARAQGLEV
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEE
KVIEFSDGTLINAATNEGELEANAFQHGPYLEGQIKDRGYDLVSIAKTVLLPMAAYSKRV
EEEEECCCEEEEECCCCCCEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHH
AALGDLPQKAKVSIPNDPTNGGRALKLLEAGGLLTLKPGLGFASTVFDIDSNPKNLRILE
HHHCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEECCCCCCCEEEEE
LEATQVPRSLDDVDLAVINTNYALATGLDPLRDSLLREGDLSQYFCLIAVRRQDADQPWA
EEHHHCCCCCCCCEEEEEECCEEEECCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHH
KVLRQSFLSPEVKAFVATTFHGNILAGW
HHHHHHHCCCCHHEEEEEEECCCEEECC
>Mature Secondary Structure
MRMAKIVRVPALRVALAGALLVLGLGPCLAQTIRLGVTPGPHAQIAEAVVPVARAQGLEV
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEE
KVIEFSDGTLINAATNEGELEANAFQHGPYLEGQIKDRGYDLVSIAKTVLLPMAAYSKRV
EEEEECCCEEEEECCCCCCEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHH
AALGDLPQKAKVSIPNDPTNGGRALKLLEAGGLLTLKPGLGFASTVFDIDSNPKNLRILE
HHHCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEECCCCCCCEEEEE
LEATQVPRSLDDVDLAVINTNYALATGLDPLRDSLLREGDLSQYFCLIAVRRQDADQPWA
EEHHHCCCCCCCCEEEEEECCEEEECCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHH
KVLRQSFLSPEVKAFVATTFHGNILAGW
HHHHHHHCCCCHHEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]