| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hemA [H]
Identifier: 83592088
GI number: 83592088
Start: 877689
End: 879014
Strand: Direct
Name: hemA [H]
Synonym: Rru_A0749
Alternate gene names: 83592088
Gene position: 877689-879014 (Clockwise)
Preceding gene: 83592087
Following gene: 83592089
Centisome position: 20.16
GC content: 70.97
Gene sequence:
>1326_bases GTGGCGCAGGAGCGGACGGCGGGATGCGGGGTGGACGGCTACGTGATGGTGGGGGTGAACCACCAGACCACGCCGATGGC CCTGCGCGACCGCCTTGTTCTTGACGACCCCGCCCTGGCCGCCCTTCTGGTGCGGCTGCGCGCCCGCGGCGTGACCGAGG CTTTGGCGCTATCGACCTGTGATCGCGTGGAGATCTTTGGTCATGGCGGCGATCCCCGCGCCTTGCGCGCCCTGCTGCTG GCCGAGCTTTGCGCGGTTGGTCCTATCGAACCGGCGGCCCTGGCCGGTCAGATGGTCGATCTGCGCGGCTTGGCGGTTGT CGCGCATATGTTTCGCATCACCTCGGCCCTGGAGAGCCAGGTTCTGGGCGAGCCCCATATTTTGGGGCAGGTCAAGGCCG CCCACCGCATCGCCCGCGACGCCGGCACCGTTGGATCGGCGACCGAGGCCCTGATGCAGGCGGCCTATGCCATCGCCAAA CGCGTGCGCAGCGAGACGCGCATTTCCGAAGGGCCGGTCAGTCTGGCCGCCGTCGCCGCCCAGATCGCCCGCGATCTTCA CGGCGATCTTGGCGAAACCTGCCTGCTGCTGCTGGGCACCCAGGAGATGGGCGAGTTGATCGCCGAACAGCTTCAGATGG CCGGTGTCGGCCGGCTGGTGGTCTGCGCCCCCCGGCGGCCGCGCGCCGAGGCGGTGGCGGCGCGGCTGGGGGCGAGTGTC GGCGATCACGGGGCCTTGCTTGATCTGCTGCCCAATGCCGATATCGTCGTCGTCGGCGTTGGCGGCGGGCTGCTGGCCCT GGGCGAGGAGGCCATGCGCCGCACCTTGAAGCGCCGCCGCAACCGGCCTGTCTTCATCGTCGACGCCGGGGTGCCGGGCA ATGTCGAGCCGTCGGTCCAGCGGCTGGAGGCGGCCTTTCTCTACGATCTGGCCGATCTGGAGGCGGTGGCCGAGGAAGGG CGGGCGGCCCGCGATCAGGCGTCGCGCGAGGCCCACGCCCTGGTGGCCGATGCGGTCGCCGCCTTTGAGCGCCACCGGGC CGAACGGGCCGCCGTGCCGGCGATCGCCGCCCTGCGCGCCCATTTCGAGGGCGAGCGTCTGCGCGCCCTGGCCGAGGCCC CCGACGATGCGGAAAAGGCCACCCGGCTGCTGGTCGGACGCCTGCTGCATGGGCCGAGCGAGGCCTTGCGCGATCTGGCG GCGGGATCGGCCGACAAGGAATTCATGACGGTGCGGGCGGAGATGCTGCTGCGGCGGCTGTTTGACCTGCCCACGAGCAT CGCCGAAACGGGCGCAACCGACCGGGAGGATGGGTCGAAGGGATGA
Upstream 100 bases:
>100_bases TCGTGCGCGATCTTGACAGCGGCGAGCAGGAAACCATCGGCCTTGCTGTGCTGGAGGAGTTCCTGGCCCGGTTCCTCTAG CTTATCGGAGGGGAGAGCGG
Downstream 100 bases:
>100_bases GTTTGGAAGAGAACCTGAGCCGCGTGGTCGCCCGGCACGATGAATTGCGCGCCCTGCTGTCGACCAGCGCCGGCGGCGGC GAGGGCTTCGTGCGCATGTC
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAQERTAGCGVDGYVMVGVNHQTTPMALRDRLVLDDPALAALLVRLRARGVTEALALSTCDRVEIFGHGGDPRALRALLL AELCAVGPIEPAALAGQMVDLRGLAVVAHMFRITSALESQVLGEPHILGQVKAAHRIARDAGTVGSATEALMQAAYAIAK RVRSETRISEGPVSLAAVAAQIARDLHGDLGETCLLLLGTQEMGELIAEQLQMAGVGRLVVCAPRRPRAEAVAARLGASV GDHGALLDLLPNADIVVVGVGGGLLALGEEAMRRTLKRRRNRPVFIVDAGVPGNVEPSVQRLEAAFLYDLADLEAVAEEG RAARDQASREAHALVADAVAAFERHRAERAAVPAIAALRAHFEGERLRALAEAPDDAEKATRLLVGRLLHGPSEALRDLA AGSADKEFMTVRAEMLLRRLFDLPTSIAETGATDREDGSKG
Sequences:
>Translated_441_residues MAQERTAGCGVDGYVMVGVNHQTTPMALRDRLVLDDPALAALLVRLRARGVTEALALSTCDRVEIFGHGGDPRALRALLL AELCAVGPIEPAALAGQMVDLRGLAVVAHMFRITSALESQVLGEPHILGQVKAAHRIARDAGTVGSATEALMQAAYAIAK RVRSETRISEGPVSLAAVAAQIARDLHGDLGETCLLLLGTQEMGELIAEQLQMAGVGRLVVCAPRRPRAEAVAARLGASV GDHGALLDLLPNADIVVVGVGGGLLALGEEAMRRTLKRRRNRPVFIVDAGVPGNVEPSVQRLEAAFLYDLADLEAVAEEG RAARDQASREAHALVADAVAAFERHRAERAAVPAIAALRAHFEGERLRALAEAPDDAEKATRLLVGRLLHGPSEALRDLA AGSADKEFMTVRAEMLLRRLFDLPTSIAETGATDREDGSKG >Mature_440_residues AQERTAGCGVDGYVMVGVNHQTTPMALRDRLVLDDPALAALLVRLRARGVTEALALSTCDRVEIFGHGGDPRALRALLLA ELCAVGPIEPAALAGQMVDLRGLAVVAHMFRITSALESQVLGEPHILGQVKAAHRIARDAGTVGSATEALMQAAYAIAKR VRSETRISEGPVSLAAVAAQIARDLHGDLGETCLLLLGTQEMGELIAEQLQMAGVGRLVVCAPRRPRAEAVAARLGASVG DHGALLDLLPNADIVVVGVGGGLLALGEEAMRRTLKRRRNRPVFIVDAGVPGNVEPSVQRLEAAFLYDLADLEAVAEEGR AARDQASREAHALVADAVAAFERHRAERAAVPAIAALRAHFEGERLRALAEAPDDAEKATRLLVGRLLHGPSEALRDLAA GSADKEFMTVRAEMLLRRLFDLPTSIAETGATDREDGSKG
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=409, Percent_Identity=32.518337408313, Blast_Score=183, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 46570; Mature: 46439
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQERTAGCGVDGYVMVGVNHQTTPMALRDRLVLDDPALAALLVRLRARGVTEALALSTC CCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC DRVEIFGHGGDPRALRALLLAELCAVGPIEPAALAGQMVDLRGLAVVAHMFRITSALESQ CCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGEPHILGQVKAAHRIARDAGTVGSATEALMQAAYAIAKRVRSETRISEGPVSLAAVAA HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QIARDLHGDLGETCLLLLGTQEMGELIAEQLQMAGVGRLVVCAPRRPRAEAVAARLGASV HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC GDHGALLDLLPNADIVVVGVGGGLLALGEEAMRRTLKRRRNRPVFIVDAGVPGNVEPSVQ CCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH RLEAAFLYDLADLEAVAEEGRAARDQASREAHALVADAVAAFERHRAERAAVPAIAALRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFEGERLRALAEAPDDAEKATRLLVGRLLHGPSEALRDLAAGSADKEFMTVRAEMLLRRL HCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FDLPTSIAETGATDREDGSKG HHCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure AQERTAGCGVDGYVMVGVNHQTTPMALRDRLVLDDPALAALLVRLRARGVTEALALSTC CCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC DRVEIFGHGGDPRALRALLLAELCAVGPIEPAALAGQMVDLRGLAVVAHMFRITSALESQ CCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGEPHILGQVKAAHRIARDAGTVGSATEALMQAAYAIAKRVRSETRISEGPVSLAAVAA HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QIARDLHGDLGETCLLLLGTQEMGELIAEQLQMAGVGRLVVCAPRRPRAEAVAARLGASV HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC GDHGALLDLLPNADIVVVGVGGGLLALGEEAMRRTLKRRRNRPVFIVDAGVPGNVEPSVQ CCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH RLEAAFLYDLADLEAVAEEGRAARDQASREAHALVADAVAAFERHRAERAAVPAIAALRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFEGERLRALAEAPDDAEKATRLLVGRLLHGPSEALRDLAAGSADKEFMTVRAEMLLRRL HCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FDLPTSIAETGATDREDGSKG HHCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA