| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is prs [H]
Identifier: 83591984
GI number: 83591984
Start: 766783
End: 767715
Strand: Direct
Name: prs [H]
Synonym: Rru_A0645
Alternate gene names: 83591984
Gene position: 766783-767715 (Clockwise)
Preceding gene: 83591983
Following gene: 83591985
Centisome position: 17.62
GC content: 63.99
Gene sequence:
>933_bases ATGAAGATCCTGGCCTGCAACAGCAATCGCCCGCTTGCCGAGGCGATCGCTACCTATCTCAACCTCGAGCTGACCCATGC GAGTGTCAGGCGGTTCAGCGACATGGAGGTCTGGGTAGAGATCCTCGAAAATGTGCGCGGCGAGGATGTGTTCGTGGTCC AGTCGACCAGCTATCCGGCCAACGACCATTTGATGGAGACCCTGGTCACCCTTGATGCCCTCAAGCGCGGTTCGGCGCGT CGGGTGACCGCCGTCATCCCCTATTTCGGCTACGCCCGTCAGGATCGCAAGACCGGCCCGCGCACCCCGATCACCGCCAA GCTGGTTGCCAATCTCATCACCAGCGCCGGCGCCAACCGCGTGGTGACGCTGGATCTGCATTCCGGCCAGATCCAGGGCT TCTTCGATATTCCTTTGGATAATCTCTACGCCGCCCCGGTGTTCTCCAAGCACATCATCGAGAACTTCAAGGGCACGCGG CCGATGATCATTTCGCCCGATGTCGGCGGCGTGGTCCGCGCCCGTGAACTGGCCCGGCGGATCGAGGCCGATCTGGCGAT CATCGACAAGCGGCGCGAGCGCGCCGGCGTGTCGGAGGTGATGAACATCATCGGCGACGTGCGCGGCCGCGATTGCATCC TGGTCGATGACATCGTCGATTCCGCCGGCACGCTGTGCAACGCCGCCGTGGCCCTGAAGAACGCCGGCGCCACCTCGGTG GCCGCCTATGTGACCCATGGCGTGCTTTCGGGCGGCGCCGTCGCCCGCGTCACCAGCTCGCCGCTCGACAGCCTGTGCAT CACCGACAGCATTCAGGCGACGGAAGCCATGCGCCTTGCGCGCAATGTCCACCAGATTTCCATCGCGCCGCTGATGGCCG AGGCCATGCGCCGGATCAGCCAGGAAGCCTCGGTGTCGAGCCTGTTCAACTAA
Upstream 100 bases:
>100_bases GTTCGCGCCGGGCCTCCTGACAGCCGGCGCGTTTTTCCTCCCGTCCAACCACCATCGACCCGGCCCCTGACGCCGCCGCC GTATTCCTGGAGAGCCCGGT
Downstream 100 bases:
>100_bases GCCGACCGGCGGCGCCCGCCCCGCTGGCGGGCGCTTCCTTCTTTTTTTGTTTTTTCGATCCTTCCCCCAGACCTCGGAGA CTCGCCGATGCCCGGAGCCA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKILACNSNRPLAEAIATYLNLELTHASVRRFSDMEVWVEILENVRGEDVFVVQSTSYPANDHLMETLVTLDALKRGSAR RVTAVIPYFGYARQDRKTGPRTPITAKLVANLITSAGANRVVTLDLHSGQIQGFFDIPLDNLYAAPVFSKHIIENFKGTR PMIISPDVGGVVRARELARRIEADLAIIDKRRERAGVSEVMNIIGDVRGRDCILVDDIVDSAGTLCNAAVALKNAGATSV AAYVTHGVLSGGAVARVTSSPLDSLCITDSIQATEAMRLARNVHQISIAPLMAEAMRRISQEASVSSLFN
Sequences:
>Translated_310_residues MKILACNSNRPLAEAIATYLNLELTHASVRRFSDMEVWVEILENVRGEDVFVVQSTSYPANDHLMETLVTLDALKRGSAR RVTAVIPYFGYARQDRKTGPRTPITAKLVANLITSAGANRVVTLDLHSGQIQGFFDIPLDNLYAAPVFSKHIIENFKGTR PMIISPDVGGVVRARELARRIEADLAIIDKRRERAGVSEVMNIIGDVRGRDCILVDDIVDSAGTLCNAAVALKNAGATSV AAYVTHGVLSGGAVARVTSSPLDSLCITDSIQATEAMRLARNVHQISIAPLMAEAMRRISQEASVSSLFN >Mature_310_residues MKILACNSNRPLAEAIATYLNLELTHASVRRFSDMEVWVEILENVRGEDVFVVQSTSYPANDHLMETLVTLDALKRGSAR RVTAVIPYFGYARQDRKTGPRTPITAKLVANLITSAGANRVVTLDLHSGQIQGFFDIPLDNLYAAPVFSKHIIENFKGTR PMIISPDVGGVVRARELARRIEADLAIIDKRRERAGVSEVMNIIGDVRGRDCILVDDIVDSAGTLCNAAVALKNAGATSV AAYVTHGVLSGGAVARVTSSPLDSLCITDSIQATEAMRLARNVHQISIAPLMAEAMRRISQEASVSSLFN
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=46.9453376205788, Blast_Score=285, Evalue=3e-77, Organism=Homo sapiens, GI28557709, Length=311, Percent_Identity=45.9807073954984, Blast_Score=277, Evalue=9e-75, Organism=Homo sapiens, GI4506129, Length=309, Percent_Identity=44.6601941747573, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI84875539, Length=312, Percent_Identity=44.2307692307692, Blast_Score=270, Evalue=1e-72, Organism=Homo sapiens, GI4506133, Length=342, Percent_Identity=32.4561403508772, Blast_Score=157, Evalue=9e-39, Organism=Homo sapiens, GI194018537, Length=338, Percent_Identity=32.8402366863905, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI310128524, Length=144, Percent_Identity=32.6388888888889, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI310115209, Length=144, Percent_Identity=32.6388888888889, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI310118259, Length=144, Percent_Identity=32.6388888888889, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI310119946, Length=144, Percent_Identity=32.6388888888889, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1787458, Length=311, Percent_Identity=51.7684887459807, Blast_Score=327, Evalue=6e-91, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=45.016077170418, Blast_Score=278, Evalue=3e-75, Organism=Caenorhabditis elegans, GI17554702, Length=311, Percent_Identity=45.016077170418, Blast_Score=277, Evalue=6e-75, Organism=Caenorhabditis elegans, GI71989924, Length=311, Percent_Identity=45.016077170418, Blast_Score=276, Evalue=1e-74, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=44.9838187702265, Blast_Score=275, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=34.0236686390533, Blast_Score=181, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6321776, Length=310, Percent_Identity=45.1612903225806, Blast_Score=263, Evalue=4e-71, Organism=Saccharomyces cerevisiae, GI6320946, Length=311, Percent_Identity=42.443729903537, Blast_Score=252, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6319403, Length=312, Percent_Identity=42.9487179487179, Blast_Score=245, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=40.3061224489796, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6324511, Length=109, Percent_Identity=40.3669724770642, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355239, Length=311, Percent_Identity=45.016077170418, Blast_Score=270, Evalue=8e-73, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=41.9161676646707, Blast_Score=257, Evalue=7e-69, Organism=Drosophila melanogaster, GI24651458, Length=351, Percent_Identity=31.9088319088319, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24651456, Length=351, Percent_Identity=31.9088319088319, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI281362873, Length=351, Percent_Identity=31.9088319088319, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24651454, Length=351, Percent_Identity=31.9088319088319, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24651462, Length=370, Percent_Identity=31.3513513513514, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24651464, Length=370, Percent_Identity=31.3513513513514, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI45552010, Length=370, Percent_Identity=31.3513513513514, Blast_Score=169, Evalue=3e-42,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33599; Mature: 33599
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILACNSNRPLAEAIATYLNLELTHASVRRFSDMEVWVEILENVRGEDVFVVQSTSYPA CEEEEECCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC NDHLMETLVTLDALKRGSARRVTAVIPYFGYARQDRKTGPRTPITAKLVANLITSAGANR HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE VVTLDLHSGQIQGFFDIPLDNLYAAPVFSKHIIENFKGTRPMIISPDVGGVVRARELARR EEEEEECCCCCCEEEECCHHHEECCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH IEADLAIIDKRRERAGVSEVMNIIGDVRGRDCILVDDIVDSAGTLCNAAVALKNAGATSV HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHH AAYVTHGVLSGGAVARVTSSPLDSLCITDSIQATEAMRLARNVHQISIAPLMAEAMRRIS HHHHHHHHHCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEASVSSLFN HHHHHHHHCC >Mature Secondary Structure MKILACNSNRPLAEAIATYLNLELTHASVRRFSDMEVWVEILENVRGEDVFVVQSTSYPA CEEEEECCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC NDHLMETLVTLDALKRGSARRVTAVIPYFGYARQDRKTGPRTPITAKLVANLITSAGANR HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE VVTLDLHSGQIQGFFDIPLDNLYAAPVFSKHIIENFKGTRPMIISPDVGGVVRARELARR EEEEEECCCCCCEEEECCHHHEECCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH IEADLAIIDKRRERAGVSEVMNIIGDVRGRDCILVDDIVDSAGTLCNAAVALKNAGATSV HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHH AAYVTHGVLSGGAVARVTSSPLDSLCITDSIQATEAMRLARNVHQISIAPLMAEAMRRIS HHHHHHHHHCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEASVSSLFN HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA