| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591898
Identifier: 83591898
GI number: 83591898
Start: 661200
End: 662003
Strand: Reverse
Name: 83591898
Synonym: Rru_A0559
Alternate gene names: NA
Gene position: 662003-661200 (Counterclockwise)
Preceding gene: 83591901
Following gene: 83591897
Centisome position: 15.21
GC content: 65.3
Gene sequence:
>804_bases ATGCATCTCGAAGTCTTGCGGGTCCCGCCAACCACCGCCGATCCGGAGATGGCCGACCGGCCACCGCTGGTTTTCGTCCA TGGCGCCTTTGCCGGCGCCTGGTGCTGGCGGGAAACCTTCATGCCCTGGTTCGCCGCGCGGGGATGGGATACCCATGCCT TGTCGTTGCGCGGCCATGGCGCCAGCGACGGCGCCGAGCGGCTCGACAGCACCCGCCTTGCCGATTACGCCGACGATCTG CGCCGGGTCATCGACGAATTGGACCGCCCCCCGGTGCTGATTGGTCATTCGATGGGCGGAATGGTCGTTCAGAAGGTGCT GGAAGATACCCAGGCCGCCGCCGCCGTGCTGCTCGCCTCGGTTCCCCCCACCGGCTTGTTCAGCGGCAGCGTGCTGATGG CGCTGCGCCATCCGTTGCTGTGCATGGCGTTATGGCGCATTCAAACCTTCGGACCGGAAGAAGCCAGCCTGCGCATGGTC GAAGCCGGACTGTTCAGCACCCCCTTGGATGCGCGCGAGGCCGAACGCTACACCGCCCTGCTGCAAAACGAATCCTCGCG GGTGGTTCTTGATATGACGTGGTTCGACGTGCCGCGCCGCCGCTGCCCCCAGGAACTGCCCCTGCTCGTGCTCGGCGCCG AGGATGACGCCTTCGTGCCACCGATCGAGGTTCTGGCGACCGCCGCCTTCCATGGCACCACCGCCCAGCTGTTGCCCGAT ATCGGCCACGCCATGATGCTCGATCGCGGATGGGAAAAAACCGCATCGGTCATGGAGGAATGGTTGCGTTGCAGCGCATT TTAA
Upstream 100 bases:
>100_bases CGCGGAACTGGCAAAGCTCTGGCGGGAAAGAGGCCATGCGCCCATATTGAACCCCCCGCGCCCCCGCGCTCGCACCCACA AAATTCAGGAGAGCAGGTCC
Downstream 100 bases:
>100_bases TTAAATTCCACCAATAAGGGATCGGCGCCGCCATAAAAGAGCGATAAGAGAATTTTTCATCGACCGGGGGCCGTGCCGTT AACCATGTCCGCCAGCCCGC
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Protein; Hydrolase Or Acyltransferase; Alpha/Beta Hydrolase Fold-Containing Protein; Acetone-Cyanohydrin Lyase; Alpha/Beta Hydrolase; Esterase Lipase Family Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; Lysophospholipase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase; Alpha/Beta Hydrolase Fold Domain-Containing Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHLEVLRVPPTTADPEMADRPPLVFVHGAFAGAWCWRETFMPWFAARGWDTHALSLRGHGASDGAERLDSTRLADYADDL RRVIDELDRPPVLIGHSMGGMVVQKVLEDTQAAAAVLLASVPPTGLFSGSVLMALRHPLLCMALWRIQTFGPEEASLRMV EAGLFSTPLDAREAERYTALLQNESSRVVLDMTWFDVPRRRCPQELPLLVLGAEDDAFVPPIEVLATAAFHGTTAQLLPD IGHAMMLDRGWEKTASVMEEWLRCSAF
Sequences:
>Translated_267_residues MHLEVLRVPPTTADPEMADRPPLVFVHGAFAGAWCWRETFMPWFAARGWDTHALSLRGHGASDGAERLDSTRLADYADDL RRVIDELDRPPVLIGHSMGGMVVQKVLEDTQAAAAVLLASVPPTGLFSGSVLMALRHPLLCMALWRIQTFGPEEASLRMV EAGLFSTPLDAREAERYTALLQNESSRVVLDMTWFDVPRRRCPQELPLLVLGAEDDAFVPPIEVLATAAFHGTTAQLLPD IGHAMMLDRGWEKTASVMEEWLRCSAF >Mature_267_residues MHLEVLRVPPTTADPEMADRPPLVFVHGAFAGAWCWRETFMPWFAARGWDTHALSLRGHGASDGAERLDSTRLADYADDL RRVIDELDRPPVLIGHSMGGMVVQKVLEDTQAAAAVLLASVPPTGLFSGSVLMALRHPLLCMALWRIQTFGPEEASLRMV EAGLFSTPLDAREAERYTALLQNESSRVVLDMTWFDVPRRRCPQELPLLVLGAEDDAFVPPIEVLATAAFHGTTAQLLPD IGHAMMLDRGWEKTASVMEEWLRCSAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29557; Mature: 29557
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLEVLRVPPTTADPEMADRPPLVFVHGAFAGAWCWRETFMPWFAARGWDTHALSLRGHG CCEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC ASDGAERLDSTRLADYADDLRRVIDELDRPPVLIGHSMGGMVVQKVLEDTQAAAAVLLAS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC VPPTGLFSGSVLMALRHPLLCMALWRIQTFGPEEASLRMVEAGLFSTPLDAREAERYTAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH LQNESSRVVLDMTWFDVPRRRCPQELPLLVLGAEDDAFVPPIEVLATAAFHGTTAQLLPD HHCCCCEEEEEEHHHHCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHH IGHAMMLDRGWEKTASVMEEWLRCSAF HHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLEVLRVPPTTADPEMADRPPLVFVHGAFAGAWCWRETFMPWFAARGWDTHALSLRGHG CCEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC ASDGAERLDSTRLADYADDLRRVIDELDRPPVLIGHSMGGMVVQKVLEDTQAAAAVLLAS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHC VPPTGLFSGSVLMALRHPLLCMALWRIQTFGPEEASLRMVEAGLFSTPLDAREAERYTAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH LQNESSRVVLDMTWFDVPRRRCPQELPLLVLGAEDDAFVPPIEVLATAAFHGTTAQLLPD HHCCCCEEEEEEHHHHCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHH IGHAMMLDRGWEKTASVMEEWLRCSAF HHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA