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The map label for this gene is trg [C]

Identifier: 83591781

GI number: 83591781

Start: 518604

End: 520565

Strand: Direct

Name: trg [C]

Synonym: Rru_A0441

Alternate gene names: 83591781

Gene position: 518604-520565 (Clockwise)

Preceding gene: 83591779

Following gene: 83591789

Centisome position: 11.91

GC content: 72.27

Gene sequence:

>1962_bases
ATGGGGGTCTTTCACCGCGCGGGCATCGCGTTCCAGATCACTTTGGTCGCGGTGGTGGCGGTGGTCGGCTTCCTGGCCGT
TGGCGCGGTATTTTTCGCCAATCAAACGCGCCTTGAGCGCTATCGGCAAGAAGCCGGCGCGGCGGCGGTGGCGGCCGATC
TGACCGCCGATCTGAGCGCCGCCCTGGTCGAGGCCCGCAAACGCGAAGGGTTGTTCCTGCTCCGCCCCGCCGAGGCCGAG
ATCACCGCCCATGGCGCCATGTTGACCAAGGCGGCGGAGGCCTTGACGGCGCTTGATCGGGCTTTGGCCGGGCGGGCCGA
GGCCGGGCGGATGAGCGCGGTGCGCCAGGGCGTGGGCGAGGGGGGCGAGGGATTTGGCCGATTGGTCGCGCTCCTGCGCA
AGGTCGGCTTTTCCGACGAGGGCGGCCTGCGTCTGCGGTTGGGCCAATCGGTGCGGGCGGTCGAGGCGGCGGTGGAGGAA
TACGCCGACGATAACCTGATGGTGCCGCTGCTGACCATGCGGCGGGCGGAAAAGGATTTTCTGCTGTCGCTGCGACCCGG
CTTCATCGATGAGTTCGCCAAGGCCCGCGACAAGGTTCTGGCCCTGCTTGAATGGTCGAACCTGCCCGCCGATCAGGTGC
CTCGGGCGCGGGCGCTGATCACCACCTATTCCGCCGATTTCGCCGAGCTGGCGCGGAGTCGCCAGGAACTGGAGGGCGAG
ATCGCCCGGCAGGCGGCGCTCTACGAGCGGCTTGATCCCCAGGTGCGCGAACTTGCCCAAGCCCTGGAGGCGCGACGGGG
CGAGGCCGAGGCGGCGGCGCGCCGCGCCGGCGTCGAAACCGGTCGGCTGATGCTGGGCGCGATGATCGGCGCGCCGTTGC
TGGTGGTTCTGGCCGGCCTGGCCCTGGCGCGGCGTATCCAGGCGCCGCTGGCGGCGATCACCGCGGCGATGACCGCCCTG
GCCGGCGGCGATCGCGCCCGGGCCATTCCCGAGACCGACCGGCGCAACGAGATCGGCGCCATGGCCCGGGCGGTGGCGAC
CTTCAAGGACGCCATGGTCGCCGCCGAGGCCCTGGCCCAGGAACAGGCCGCCCAAGAGCGCGCCCGGGGGGAGCGGGCCG
AACGTCTCGCCGCCCTGACCCGGCGTTTCGAGCAGTCGGTGGGCGGCCGTCTGGGGGCGGTCGATGACGCTTTGGCGGGG
ATGGACGGAACCGGCAAGGCCATGCAGGGCGCGGCCGAAACCGTGGCCGATCACTCCCGGGCGGTGGCGAGCGCCTCGGC
CCAGGCCTCGGCCAATGTGCGGACCGTGGCCGAGGCCGCCGCCGCCCTGGGCGCGTCGATCAGCGAGGTCGCCGCCCAGA
TGGACCGCCAGTCGACGGAGGCCGAACGGGCGGAAAGCCGCATGGATCAGGCCAATGCCCTGATGGAGGGCCTGTCGGCT
TCGGCCGGGCGCATCGGCGAGGTGGTGACGCTGATCGCCGATATCGCCAGCCAAACCAATCTTCTGGCGCTTAACGCCAC
GATCGAGGCGGCGCGGGCGGGCGAAGCCGGCAAGGGCTTCGCCGTGGTCGCCGGCGAGGTCAAGACCCTGGCGACGCAGA
CCGGTCGGGCGACCGGCGACATCGCCGCCCAGGTCGCCGAGGTGCAACGGGCGACCGCCGCCGCCCTGGACGCCATCGCC
CGGGTTGGCGAAAGCTTCGCCGGCATCCGCGCCGTCTCGGTGGCGATCACCGCCGCCGTCGACGCCCAGCGTGCCGCCAC
GGCCGAGATCGGGCGCAATGTGGACGAGGCGGCGATGGGCACCCGGCAGGTTGACGGCGGCATCGATCGGGTGCGTGACG
CCGCCGAACAGGCGCGCCGCGCCGCCGCCGATGTCCGCGCCGCCGCCGCCGCCCTGACCGAGCAATCGGGCGGGCTGCAC
GCCGAGGTTGGCGGTTTCCTGGCCGAGGTTCAGAGCGTGTAG

Upstream 100 bases:

>100_bases
CCGAAGAGACCTCTTTGTTAGAAGGGTCTTTTTTTATGCAACCCCTGGTGATCGCCCTCTATGATGGCGATCGGGCAGAC
AGGGCAGAGGGGATGGCGTC

Downstream 100 bases:

>100_bases
TCTCGGCGCGTGAGAAGGGGGGTTAGGGCGCGGGCGGCAGCACCTTGCCCGGGTTCATCAGGTTGCGCGGATCGAAGGCG
GCCTTGATCGCGCGCATCAT

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 653; Mature: 652

Protein sequence:

>653_residues
MGVFHRAGIAFQITLVAVVAVVGFLAVGAVFFANQTRLERYRQEAGAAAVAADLTADLSAALVEARKREGLFLLRPAEAE
ITAHGAMLTKAAEALTALDRALAGRAEAGRMSAVRQGVGEGGEGFGRLVALLRKVGFSDEGGLRLRLGQSVRAVEAAVEE
YADDNLMVPLLTMRRAEKDFLLSLRPGFIDEFAKARDKVLALLEWSNLPADQVPRARALITTYSADFAELARSRQELEGE
IARQAALYERLDPQVRELAQALEARRGEAEAAARRAGVETGRLMLGAMIGAPLLVVLAGLALARRIQAPLAAITAAMTAL
AGGDRARAIPETDRRNEIGAMARAVATFKDAMVAAEALAQEQAAQERARGERAERLAALTRRFEQSVGGRLGAVDDALAG
MDGTGKAMQGAAETVADHSRAVASASAQASANVRTVAEAAAALGASISEVAAQMDRQSTEAERAESRMDQANALMEGLSA
SAGRIGEVVTLIADIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLATQTGRATGDIAAQVAEVQRATAAALDAIA
RVGESFAGIRAVSVAITAAVDAQRAATAEIGRNVDEAAMGTRQVDGGIDRVRDAAEQARRAAADVRAAAAALTEQSGGLH
AEVGGFLAEVQSV

Sequences:

>Translated_653_residues
MGVFHRAGIAFQITLVAVVAVVGFLAVGAVFFANQTRLERYRQEAGAAAVAADLTADLSAALVEARKREGLFLLRPAEAE
ITAHGAMLTKAAEALTALDRALAGRAEAGRMSAVRQGVGEGGEGFGRLVALLRKVGFSDEGGLRLRLGQSVRAVEAAVEE
YADDNLMVPLLTMRRAEKDFLLSLRPGFIDEFAKARDKVLALLEWSNLPADQVPRARALITTYSADFAELARSRQELEGE
IARQAALYERLDPQVRELAQALEARRGEAEAAARRAGVETGRLMLGAMIGAPLLVVLAGLALARRIQAPLAAITAAMTAL
AGGDRARAIPETDRRNEIGAMARAVATFKDAMVAAEALAQEQAAQERARGERAERLAALTRRFEQSVGGRLGAVDDALAG
MDGTGKAMQGAAETVADHSRAVASASAQASANVRTVAEAAAALGASISEVAAQMDRQSTEAERAESRMDQANALMEGLSA
SAGRIGEVVTLIADIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLATQTGRATGDIAAQVAEVQRATAAALDAIA
RVGESFAGIRAVSVAITAAVDAQRAATAEIGRNVDEAAMGTRQVDGGIDRVRDAAEQARRAAADVRAAAAALTEQSGGLH
AEVGGFLAEVQSV
>Mature_652_residues
GVFHRAGIAFQITLVAVVAVVGFLAVGAVFFANQTRLERYRQEAGAAAVAADLTADLSAALVEARKREGLFLLRPAEAEI
TAHGAMLTKAAEALTALDRALAGRAEAGRMSAVRQGVGEGGEGFGRLVALLRKVGFSDEGGLRLRLGQSVRAVEAAVEEY
ADDNLMVPLLTMRRAEKDFLLSLRPGFIDEFAKARDKVLALLEWSNLPADQVPRARALITTYSADFAELARSRQELEGEI
ARQAALYERLDPQVRELAQALEARRGEAEAAARRAGVETGRLMLGAMIGAPLLVVLAGLALARRIQAPLAAITAAMTALA
GGDRARAIPETDRRNEIGAMARAVATFKDAMVAAEALAQEQAAQERARGERAERLAALTRRFEQSVGGRLGAVDDALAGM
DGTGKAMQGAAETVADHSRAVASASAQASANVRTVAEAAAALGASISEVAAQMDRQSTEAERAESRMDQANALMEGLSAS
AGRIGEVVTLIADIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLATQTGRATGDIAAQVAEVQRATAAALDAIAR
VGESFAGIRAVSVAITAAVDAQRAATAEIGRNVDEAAMGTRQVDGGIDRVRDAAEQARRAAADVRAAAAALTEQSGGLHA
EVGGFLAEVQSV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=375, Percent_Identity=28, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=254, Percent_Identity=31.1023622047244, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI2367378, Length=326, Percent_Identity=27.3006134969325, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1788194, Length=399, Percent_Identity=27.5689223057644, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788195, Length=132, Percent_Identity=36.3636363636364, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67737; Mature: 67605

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFHRAGIAFQITLVAVVAVVGFLAVGAVFFANQTRLERYRQEAGAAAVAADLTADLSA
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
ALVEARKREGLFLLRPAEAEITAHGAMLTKAAEALTALDRALAGRAEAGRMSAVRQGVGE
HHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
GGEGFGRLVALLRKVGFSDEGGLRLRLGQSVRAVEAAVEEYADDNLMVPLLTMRRAEKDF
CCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHH
LLSLRPGFIDEFAKARDKVLALLEWSNLPADQVPRARALITTYSADFAELARSRQELEGE
EEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHH
IARQAALYERLDPQVRELAQALEARRGEAEAAARRAGVETGRLMLGAMIGAPLLVVLAGL
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALARRIQAPLAAITAAMTALAGGDRARAIPETDRRNEIGAMARAVATFKDAMVAAEALAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAAQERARGERAERLAALTRRFEQSVGGRLGAVDDALAGMDGTGKAMQGAAETVADHSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
AVASASAQASANVRTVAEAAAALGASISEVAAQMDRQSTEAERAESRMDQANALMEGLSA
HHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAGRIGEVVTLIADIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLATQTGRATGD
CCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCHHH
IAAQVAEVQRATAAALDAIARVGESFAGIRAVSVAITAAVDAQRAATAEIGRNVDEAAMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
TRQVDGGIDRVRDAAEQARRAAADVRAAAAALTEQSGGLHAEVGGFLAEVQSV
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVFHRAGIAFQITLVAVVAVVGFLAVGAVFFANQTRLERYRQEAGAAAVAADLTADLSA
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
ALVEARKREGLFLLRPAEAEITAHGAMLTKAAEALTALDRALAGRAEAGRMSAVRQGVGE
HHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
GGEGFGRLVALLRKVGFSDEGGLRLRLGQSVRAVEAAVEEYADDNLMVPLLTMRRAEKDF
CCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHH
LLSLRPGFIDEFAKARDKVLALLEWSNLPADQVPRARALITTYSADFAELARSRQELEGE
EEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHH
IARQAALYERLDPQVRELAQALEARRGEAEAAARRAGVETGRLMLGAMIGAPLLVVLAGL
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALARRIQAPLAAITAAMTALAGGDRARAIPETDRRNEIGAMARAVATFKDAMVAAEALAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAAQERARGERAERLAALTRRFEQSVGGRLGAVDDALAGMDGTGKAMQGAAETVADHSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
AVASASAQASANVRTVAEAAAALGASISEVAAQMDRQSTEAERAESRMDQANALMEGLSA
HHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAGRIGEVVTLIADIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLATQTGRATGD
CCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCHHH
IAAQVAEVQRATAAALDAIARVGESFAGIRAVSVAITAAVDAQRAATAEIGRNVDEAAMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
TRQVDGGIDRVRDAAEQARRAAADVRAAAAALTEQSGGLHAEVGGFLAEVQSV
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]