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The map label for this gene is aapJ [H]

Identifier: 83591779

GI number: 83591779

Start: 516351

End: 517445

Strand: Direct

Name: aapJ [H]

Synonym: Rru_A0439

Alternate gene names: 83591779

Gene position: 516351-517445 (Clockwise)

Preceding gene: 83591776

Following gene: 83591781

Centisome position: 11.86

GC content: 68.31

Gene sequence:

>1095_bases
ATGGAGGATTCGGTTCTGACCTCTCGCGCTCTGTGTCGTGGCCTCGCGGTGGTTCTGGCCATCGGTTTCGCTCTGCTGTC
GCCGCTGGCCGGTCGCGCCGAGCAAGCACCGGCGTCCCCGATCTCCGCAGCGGAGGGGGACACCCTTAGGCAGGTGCGCG
AACGGGGGTATCTGACCTGCGGCGTCAATGCCCGGCTGACCGGCTTGGGATCCGTCGACCCCGACGGGGTGTGGCGCGGC
TTTGACATCGATTATTGCCGGGCGGTGGCGGCGGCCGCCCTTGGCGACAGCGGACGGGTCCGATTCGTTCCCCTGGATAT
CCGTTCGCGCCTGCTGGCCCTGACCAGCGGCGAGGTCGATCTGCTGTCGCGCAACACCACCTGGACGTTGGAGCGCGATG
CCGGCCAAGGCATCTCGTTCGTTGGCGTCAGTTTATTCGATGGACCGGGGCTGCTCGCCTGGAAGGATCTTCCCGGCGAC
GATCTGGCCTCGCTGCCGCCGACGGCCCGTCTCTGCGTCCAAAGCGCGGCGACGGCGGCCCGGGTGCTTCCCGCCCGCAT
GGCCGCCGCCGGTTTGTCTTTTACCATTCTGCCCTTTCGCTCGCTGGAAGAGGCGCGCATGGCCTTGTTCACCCGGGCCT
GCGACGGTTATGTCGCCGATCGCACGGCGCTGGCCTCGCTGGCGACCTTCGAGGCGCCGCGCCCCGACGCCCTGCGCCTG
TTGCCCGATCTGTTGGCCGTTGAGCCGCTGGGGCCGGCGGTGCGCGACGGCGATGCCAATTGGTTCGACATCGCCCGCTG
GACCCTGTTCGCCCTGATCAAGGCCGAGGAAGAGGGGTTAAGCCACGATCGCCTGCCCGCGGTGCTTGAAAGCACCCAGG
ATCCGGAGCTGCGCCGCTTTCTGGGGCTTGATCCCGGAGTGGGGGCGCCCCTTGGTCTGGACGACGCCTGGGTCCGCCGG
ATTGTCAGTCAGGTCGGCACCTACGGCGAGGTCTTCGACCGCAATCTGGGCCAGGGCAGCCCTCTGAAGCTTGAGCGCGG
GCCCAATGCCCTGCGGCGCGACGGCGGGTTGATGGTCGCCCCGCCGTTTTTCTAA

Upstream 100 bases:

>100_bases
CACGCTTGCGCGGTTTGGTGGCAGCGGCGGTTTGTCGGCCCGCGTACCCTGTGGTAAGCAGCCCTTCTCGGCTCGTCCGC
TCACCCCGGAGCGGCGACCC

Downstream 100 bases:

>100_bases
TTTCCCGCGCCTGCTTCTAATTCACCGCGCGGGCGGCGCTGGCGCAATAGGCGCGGGCCCGGAGCAGGCTGTCGGCCGCC
GTCGCGTCGTCGTGCTTTTC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MEDSVLTSRALCRGLAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDPDGVWRG
FDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDAGQGISFVGVSLFDGPGLLAWKDLPGD
DLASLPPTARLCVQSAATAARVLPARMAAAGLSFTILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRL
LPDLLAVEPLGPAVRDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDPGVGAPLGLDDAWVRR
IVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPPFF

Sequences:

>Translated_364_residues
MEDSVLTSRALCRGLAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDPDGVWRG
FDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDAGQGISFVGVSLFDGPGLLAWKDLPGD
DLASLPPTARLCVQSAATAARVLPARMAAAGLSFTILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRL
LPDLLAVEPLGPAVRDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDPGVGAPLGLDDAWVRR
IVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPPFF
>Mature_364_residues
MEDSVLTSRALCRGLAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTCGVNARLTGLGSVDPDGVWRG
FDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVDLLSRNTTWTLERDAGQGISFVGVSLFDGPGLLAWKDLPGD
DLASLPPTARLCVQSAATAARVLPARMAAAGLSFTILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRL
LPDLLAVEPLGPAVRDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRFLGLDPGVGAPLGLDDAWVRR
IVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVAPPFF

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 38875; Mature: 38875

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDSVLTSRALCRGLAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCEEE
GVNARLTGLGSVDPDGVWRGFDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVD
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCEE
LLSRNTTWTLERDAGQGISFVGVSLFDGPGLLAWKDLPGDDLASLPPTARLCVQSAATAA
EEECCCEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCCCHHCCCCHHHHHHHHHHHHH
RVLPARMAAAGLSFTILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRL
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHH
LPDLLAVEPLGPAVRDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHH
LGLDPGVGAPLGLDDAWVRRIVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVA
HCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCEEECCCCCHHHHCCCEEEC
PPFF
CCCC
>Mature Secondary Structure
MEDSVLTSRALCRGLAVVLAIGFALLSPLAGRAEQAPASPISAAEGDTLRQVRERGYLTC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHCCCEEE
GVNARLTGLGSVDPDGVWRGFDIDYCRAVAAAALGDSGRVRFVPLDIRSRLLALTSGEVD
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCEE
LLSRNTTWTLERDAGQGISFVGVSLFDGPGLLAWKDLPGDDLASLPPTARLCVQSAATAA
EEECCCEEEEECCCCCCEEEEEEEEECCCCEEEECCCCCCCHHCCCCHHHHHHHHHHHHH
RVLPARMAAAGLSFTILPFRSLEEARMALFTRACDGYVADRTALASLATFEAPRPDALRL
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHH
LPDLLAVEPLGPAVRDGDANWFDIARWTLFALIKAEEEGLSHDRLPAVLESTQDPELRRF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHH
LGLDPGVGAPLGLDDAWVRRIVSQVGTYGEVFDRNLGQGSPLKLERGPNALRRDGGLMVA
HCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCEEECCCCCHHHHCCCEEEC
PPFF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]