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The map label for this gene is 83591789

Identifier: 83591789

GI number: 83591789

Start: 527207

End: 528319

Strand: Direct

Name: 83591789

Synonym: Rru_A0449

Alternate gene names: NA

Gene position: 527207-528319 (Clockwise)

Preceding gene: 83591781

Following gene: 83591790

Centisome position: 12.11

GC content: 70.35

Gene sequence:

>1113_bases
GTGGACAAGGATTGGGGCGACGCTATCCGTCCGGCTCGCTACTGGCATCGGCAAGGCGCCGATCATGCGGTGTGCGATCT
GTGCCCGCGCCATTGCCGCCTGGGCCCCGGACAGCGCGGGCTATGTTTCGTCCGCGCCAATATCGAGGGGGTTATGGTGC
TGACGGGGGCCGGGCGCTCCTCGGGGTTTTGTGTCGATCCGATCGAGAAGAAGCCGCTCGCCCATTTCCTGCCCGGCACG
CCGGTGCTGTCGTTCGGCGGGGCGGGGTGCAATCTGACCTGTGCGGGCTGCCAGAATTGGCGCCTGTCGCGGGCGCGTTC
GATGGATCGGCTGGGGGGGACCACCAGCCCGCGGGCCATCGCCGATCTGGCCCTTGGCCTGGGCTGCCGCTCGGTGGCCT
TCACCTATAATGATCCGGTGATTGCCTGCGAAGAGGTGATCGACGTGGCCCTGGCCTGCCGCGATCGCGGGCTGCGCACG
GTGGCGGTGACGGCGGGCTATATCGACCCCGCTCCGGCGCGGGATTTCTTCGCGGTGATGGACGCCGCCAATGTCGATCT
CAAGGCCTTTCGCGAAGACGGCTACCGCAAGCTGACCTCGGCCCACCTTGGCCCGGTGCTGGAGACCTTGCGCTTTCTGG
CCGGAGAAGCCGCCGTGTGGCTGGAAATCACCACCCTGCTGATCCCCGGCCGCAATGACGGCGACGAGGAACTGGCCGAT
CTCGTGGCCTTTGTCGCGGCGGATCTGGGGCGCGAGGTGCCCTTGCACTTCACCGCCTTCCACCCCGACCACCGGCTGAG
CGCGCTGCCGGCCACCCCGGCGGCCACCTTGCTGCGCGCCCGCGAAATCGCCCGCGCCGCCGGCCTCGCCCATGTCTATC
TGGGCAATCTGCCCGCCGGCGCCTTGGGCGGGGCGGAAGACGGCGAGACCACCCTTTGCGTCGGCTGCGGCGCGCCGCTG
ATCGGCCGGCGCGGCTATGCCATCACCGGCTGGGCGCTGGACGACAGCGGCCATTGCCTGGGCTGCGGCCGGGCCTTGGC
CGGGGTGATCGAAGGCCCCCCAGGCACCTGGGGCCCCCGCCGCCTGCCCGTGCCGGGGGTGGCAAGCGGTTAG

Upstream 100 bases:

>100_bases
TGGCGAGAAGAGAAGATATCAACGATGAATTCCCCGGGAACGCGAACAAAACAGCACCGGGGTGGGTCTATCCCAGCGTG
ATCAAAAGGATTAAACCACG

Downstream 100 bases:

>100_bases
GGCGCGGGGGATTCCCCATCGCCGGGGGCGAAAACGCACTCAGGGGACCCGATGCCTCGGGCCCCCTGGGCGAGAAAGAG
CGTAATCGCTCCAACTGTCA

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MDKDWGDAIRPARYWHRQGADHAVCDLCPRHCRLGPGQRGLCFVRANIEGVMVLTGAGRSSGFCVDPIEKKPLAHFLPGT
PVLSFGGAGCNLTCAGCQNWRLSRARSMDRLGGTTSPRAIADLALGLGCRSVAFTYNDPVIACEEVIDVALACRDRGLRT
VAVTAGYIDPAPARDFFAVMDAANVDLKAFREDGYRKLTSAHLGPVLETLRFLAGEAAVWLEITTLLIPGRNDGDEELAD
LVAFVAADLGREVPLHFTAFHPDHRLSALPATPAATLLRAREIARAAGLAHVYLGNLPAGALGGAEDGETTLCVGCGAPL
IGRRGYAITGWALDDSGHCLGCGRALAGVIEGPPGTWGPRRLPVPGVASG

Sequences:

>Translated_370_residues
MDKDWGDAIRPARYWHRQGADHAVCDLCPRHCRLGPGQRGLCFVRANIEGVMVLTGAGRSSGFCVDPIEKKPLAHFLPGT
PVLSFGGAGCNLTCAGCQNWRLSRARSMDRLGGTTSPRAIADLALGLGCRSVAFTYNDPVIACEEVIDVALACRDRGLRT
VAVTAGYIDPAPARDFFAVMDAANVDLKAFREDGYRKLTSAHLGPVLETLRFLAGEAAVWLEITTLLIPGRNDGDEELAD
LVAFVAADLGREVPLHFTAFHPDHRLSALPATPAATLLRAREIARAAGLAHVYLGNLPAGALGGAEDGETTLCVGCGAPL
IGRRGYAITGWALDDSGHCLGCGRALAGVIEGPPGTWGPRRLPVPGVASG
>Mature_370_residues
MDKDWGDAIRPARYWHRQGADHAVCDLCPRHCRLGPGQRGLCFVRANIEGVMVLTGAGRSSGFCVDPIEKKPLAHFLPGT
PVLSFGGAGCNLTCAGCQNWRLSRARSMDRLGGTTSPRAIADLALGLGCRSVAFTYNDPVIACEEVIDVALACRDRGLRT
VAVTAGYIDPAPARDFFAVMDAANVDLKAFREDGYRKLTSAHLGPVLETLRFLAGEAAVWLEITTLLIPGRNDGDEELAD
LVAFVAADLGREVPLHFTAFHPDHRLSALPATPAATLLRAREIARAAGLAHVYLGNLPAGALGGAEDGETTLCVGCGAPL
IGRRGYAITGWALDDSGHCLGCGRALAGVIEGPPGTWGPRRLPVPGVASG

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38978; Mature: 38978

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDWGDAIRPARYWHRQGADHAVCDLCPRHCRLGPGQRGLCFVRANIEGVMVLTGAGRS
CCCCCCHHCCHHHHHHHCCCCHHHHHHCHHHHCCCCCCCCEEEEEECCCEEEEEEECCCC
SGFCVDPIEKKPLAHFLPGTPVLSFGGAGCNLTCAGCQNWRLSRARSMDRLGGTTSPRAI
CCEEECCCCCCCHHHHCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHH
ADLALGLGCRSVAFTYNDPVIACEEVIDVALACRDRGLRTVAVTAGYIDPAPARDFFAVM
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
DAANVDLKAFREDGYRKLTSAHLGPVLETLRFLAGEAAVWLEITTLLIPGRNDGDEELAD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHH
LVAFVAADLGREVPLHFTAFHPDHRLSALPATPAATLLRAREIARAAGLAHVYLGNLPAG
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCC
ALGGAEDGETTLCVGCGAPLIGRRGYAITGWALDDSGHCLGCGRALAGVIEGPPGTWGPR
CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCC
RLPVPGVASG
CCCCCCCCCC
>Mature Secondary Structure
MDKDWGDAIRPARYWHRQGADHAVCDLCPRHCRLGPGQRGLCFVRANIEGVMVLTGAGRS
CCCCCCHHCCHHHHHHHCCCCHHHHHHCHHHHCCCCCCCCEEEEEECCCEEEEEEECCCC
SGFCVDPIEKKPLAHFLPGTPVLSFGGAGCNLTCAGCQNWRLSRARSMDRLGGTTSPRAI
CCEEECCCCCCCHHHHCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHH
ADLALGLGCRSVAFTYNDPVIACEEVIDVALACRDRGLRTVAVTAGYIDPAPARDFFAVM
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
DAANVDLKAFREDGYRKLTSAHLGPVLETLRFLAGEAAVWLEITTLLIPGRNDGDEELAD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHH
LVAFVAADLGREVPLHFTAFHPDHRLSALPATPAATLLRAREIARAAGLAHVYLGNLPAG
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCC
ALGGAEDGETTLCVGCGAPLIGRRGYAITGWALDDSGHCLGCGRALAGVIEGPPGTWGPR
CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCC
RLPVPGVASG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]