| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591776
Identifier: 83591776
GI number: 83591776
Start: 511373
End: 511891
Strand: Direct
Name: 83591776
Synonym: Rru_A0436
Alternate gene names: NA
Gene position: 511373-511891 (Clockwise)
Preceding gene: 83591770
Following gene: 83591779
Centisome position: 11.75
GC content: 61.85
Gene sequence:
>519_bases ATGGCCAGTCACGGTAAGGGCGATCGGCCGATGCCTAGGAAGAGCGGTTCAGCCTTCGGTATCGTTGCCGCCACTGCCCT GGCAATGATGCTGACGGGGGCTCCGGCCATGGCGTCGAACTGTACGCCGGCCAAGGATACCGCGGCCCTTCAGGTCCGCA CCCTGCAGAGCCACCTGATGGTCGCCGGTCTGTCTTGCGGTCAGTCGGCGCAGTACAACCAGTTTGTCAGCCAGTTCGAA AGCGAACTGGTGACCCAGGGCAAATCCCTGACCTCGTATTTTAACCGCCAGTATGGCGGGGCGGCGCGTAAGGAACTGAA CGCCTATGTGACGCGCATGGCCAATGAGGCCTCGCGGCGGTCGATGGCCAACCGCAAGGCGTTCTGTCAGGAAAGCCAGG GCGTCTTCCAGACCCTGTCGGCGATGCCCAAGGGCAATCTGGTTTCCTTCATTTCCGACCAATCGCCCTTCTCGATCCAG AACGACGCTTGCGCCACCCGCACGGCGCAGAAGCAGTAA
Upstream 100 bases:
>100_bases TGGCCAGGGTGGCTCTCTTTTGTGCAAATGCGGGGTGGTCATCGCCTGCTTGGATGTGCTAGGGAACGGGATAATCAACC AGCTTGGAGGATGCCAACCC
Downstream 100 bases:
>100_bases CCGCTTCTTTTTTCGCGCGGTAAAAAAACCGCCCGCTTCCTTGATGGAGGCGGGCGGTTTTTTATGCGCTCGTCTTAGGG CCAATCCCGGGCCAGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MASHGKGDRPMPRKSGSAFGIVAATALAMMLTGAPAMASNCTPAKDTAALQVRTLQSHLMVAGLSCGQSAQYNQFVSQFE SELVTQGKSLTSYFNRQYGGAARKELNAYVTRMANEASRRSMANRKAFCQESQGVFQTLSAMPKGNLVSFISDQSPFSIQ NDACATRTAQKQ
Sequences:
>Translated_172_residues MASHGKGDRPMPRKSGSAFGIVAATALAMMLTGAPAMASNCTPAKDTAALQVRTLQSHLMVAGLSCGQSAQYNQFVSQFE SELVTQGKSLTSYFNRQYGGAARKELNAYVTRMANEASRRSMANRKAFCQESQGVFQTLSAMPKGNLVSFISDQSPFSIQ NDACATRTAQKQ >Mature_171_residues ASHGKGDRPMPRKSGSAFGIVAATALAMMLTGAPAMASNCTPAKDTAALQVRTLQSHLMVAGLSCGQSAQYNQFVSQFES ELVTQGKSLTSYFNRQYGGAARKELNAYVTRMANEASRRSMANRKAFCQESQGVFQTLSAMPKGNLVSFISDQSPFSIQN DACATRTAQKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18432; Mature: 18301
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASHGKGDRPMPRKSGSAFGIVAATALAMMLTGAPAMASNCTPAKDTAALQVRTLQSHLM CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHH VAGLSCGQSAQYNQFVSQFESELVTQGKSLTSYFNRQYGGAARKELNAYVTRMANEASRR HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SMANRKAFCQESQGVFQTLSAMPKGNLVSFISDQSPFSIQNDACATRTAQKQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure ASHGKGDRPMPRKSGSAFGIVAATALAMMLTGAPAMASNCTPAKDTAALQVRTLQSHLM CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHH VAGLSCGQSAQYNQFVSQFESELVTQGKSLTSYFNRQYGGAARKELNAYVTRMANEASRR HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SMANRKAFCQESQGVFQTLSAMPKGNLVSFISDQSPFSIQNDACATRTAQKQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA