| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83591742
Identifier: 83591742
GI number: 83591742
Start: 479258
End: 479857
Strand: Direct
Name: 83591742
Synonym: Rru_A0402
Alternate gene names: NA
Gene position: 479258-479857 (Clockwise)
Preceding gene: 83591741
Following gene: 83591755
Centisome position: 11.01
GC content: 61.83
Gene sequence:
>600_bases GTGACCAGTTCCCCTCATCCCCTGTCCTCGGCCCCCCTGGTGACCACGACCTTCGCCGTCGGGCGTGTCTGGCACCATGT GTTTCAGGGCCTTTATCCCGATCCATTGGGCTTTGGAACCGCGCCCAGTCGATTCTCCGACCCCCGGAAGACCGTGCAAA CGCGCTTTGGTGTTTATTATGCCGGGGGGAGTTTTGAGAGTGCCGTCCTTGAGACGCTTGTCCGCGACAGAAAGAACCTG AACCCCGGCCTTCTGCTCGTGTCCGCTGCCGAGCTTGAGGCCTTTGTGCATGTCCCGGTCTTGGTGGCGGCTCCCCTTAC ACTGGTTGACCTTCGGGGAGGAAATCCGATCGTGATGGGAGTTCCAACCGATGCCGTGCGGGCGCGATCCCATCGGCTTG GTCAGCGCCTCAGTCGCGTCCTATACGATCATCCCTTGCAACCGGATGGTCTGTGCTACCCATCCCGGCTGAATGGGGAC GACGTTATAGCGGTCTATGATCGGGCGATTCCCAAGCTGAGCGCAGGGCCGCGGCGTCCGCTGTCGGCCTGCCCGGAAAT CGCGCCGGTTCTGGATCGCTACCGCATCGCTCTTCTGTGA
Upstream 100 bases:
>100_bases CTGGGTGGGGAGCGCGCTCTGGATGCCCTGACGGGCGGGCGGGTCGAGGCCGTGCTGGAGACCGCCAAGACCGTCGCCAC GGGCGGCTTCTCCTGATCCC
Downstream 100 bases:
>100_bases TGGTTGGCAAAAGACCGCGCCGCCCCGCAAACCTTATTCCTGGGCGTTGACCACTTCGCCGTGGCGGGTGCAGTCGGGCA GGGCGAGGGGGAGGAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTSSPHPLSSAPLVTTTFAVGRVWHHVFQGLYPDPLGFGTAPSRFSDPRKTVQTRFGVYYAGGSFESAVLETLVRDRKNL NPGLLLVSAAELEAFVHVPVLVAAPLTLVDLRGGNPIVMGVPTDAVRARSHRLGQRLSRVLYDHPLQPDGLCYPSRLNGD DVIAVYDRAIPKLSAGPRRPLSACPEIAPVLDRYRIALL
Sequences:
>Translated_199_residues MTSSPHPLSSAPLVTTTFAVGRVWHHVFQGLYPDPLGFGTAPSRFSDPRKTVQTRFGVYYAGGSFESAVLETLVRDRKNL NPGLLLVSAAELEAFVHVPVLVAAPLTLVDLRGGNPIVMGVPTDAVRARSHRLGQRLSRVLYDHPLQPDGLCYPSRLNGD DVIAVYDRAIPKLSAGPRRPLSACPEIAPVLDRYRIALL >Mature_198_residues TSSPHPLSSAPLVTTTFAVGRVWHHVFQGLYPDPLGFGTAPSRFSDPRKTVQTRFGVYYAGGSFESAVLETLVRDRKNLN PGLLLVSAAELEAFVHVPVLVAAPLTLVDLRGGNPIVMGVPTDAVRARSHRLGQRLSRVLYDHPLQPDGLCYPSRLNGDD VIAVYDRAIPKLSAGPRRPLSACPEIAPVLDRYRIALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014914 [H]
Pfam domain/function: PF08808 RES [H]
EC number: NA
Molecular weight: Translated: 21642; Mature: 21511
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSPHPLSSAPLVTTTFAVGRVWHHVFQGLYPDPLGFGTAPSRFSDPRKTVQTRFGVYY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEE AGGSFESAVLETLVRDRKNLNPGLLLVSAAELEAFVHVPVLVAAPLTLVDLRGGNPIVMG ECCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEE VPTDAVRARSHRLGQRLSRVLYDHPLQPDGLCYPSRLNGDDVIAVYDRAIPKLSAGPRRP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC LSACPEIAPVLDRYRIALL HHHCCHHHHHHHHHHHHCC >Mature Secondary Structure TSSPHPLSSAPLVTTTFAVGRVWHHVFQGLYPDPLGFGTAPSRFSDPRKTVQTRFGVYY CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEE AGGSFESAVLETLVRDRKNLNPGLLLVSAAELEAFVHVPVLVAAPLTLVDLRGGNPIVMG ECCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEE VPTDAVRARSHRLGQRLSRVLYDHPLQPDGLCYPSRLNGDDVIAVYDRAIPKLSAGPRRP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC LSACPEIAPVLDRYRIALL HHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]