| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591741
Identifier: 83591741
GI number: 83591741
Start: 478564
End: 479253
Strand: Direct
Name: 83591741
Synonym: Rru_A0401
Alternate gene names: NA
Gene position: 478564-479253 (Clockwise)
Preceding gene: 83591740
Following gene: 83591742
Centisome position: 10.99
GC content: 67.97
Gene sequence:
>690_bases ATGGAGCGGACGGCCGGGAAACGATCGGGGCAAGCCTCCCCTTCCTTTGCGCGCGGCGAAGACGGGGCGGAAGTTGAGGG GACGGTGCTGGTCGCCCCGCACGCCTTGAGCCCGGGGGATATGGAACGGGTGGCGAAGCTTCTCGAGGCGGAGGGTGTCA CGGGGATGCGGCTTGCCAGGGTCTGGTTGAGCCACGGGGACGCGCGACGCATTGCCGAAGGGGGCGCCGCGTCAATCCAG GCGACCCTCCTGGCCGACGATCCAGTAAACGAGGCCCCCGGGCAGGCTTTGACGCGCGCCTTGCATGAGGCCAGGGCGCG GGGGGAGGTTCTTAAGCGGACCCTTCTGGCCGACCCGGCCTTGTTGACCACCGCCGAGATGGCGGCGCGTTTGGGTATGT CGGGCGAGGGGATTCGCTTGAAGCGCAAGCGCCACGAGGTGCTGGGGCTCGATTTCGCCAAACGCGGCCTCCGCTATCCG GGGTGGCAAATTCTTGAAAACGGCCACCTTCTGCCCGCCCTGCCCACCCTCTTCGGCATTTTGGGGCGTGACCCTTGGGC GGTGTATCGGTTCTTGCTGCAATCCCATTGCGACCTGGGTGGGGAGCGCGCTCTGGATGCCCTGACGGGCGGGCGGGTCG AGGCCGTGCTGGAGACCGCCAAGACCGTCGCCACGGGCGGCTTCTCCTGA
Upstream 100 bases:
>100_bases GCCTCCAGCATGGGTGAAGGGGCCCGGACAGGAAAAGGCGCGGCGATCCTTGGCGAACTTGGCGAAATGGGCTAAGTTGT CAGAAGTAAGGGAGATCGCC
Downstream 100 bases:
>100_bases TCCCGTGACCAGTTCCCCTCATCCCCTGTCCTCGGCCCCCCTGGTGACCACGACCTTCGCCGTCGGGCGTGTCTGGCACC ATGTGTTTCAGGGCCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MERTAGKRSGQASPSFARGEDGAEVEGTVLVAPHALSPGDMERVAKLLEAEGVTGMRLARVWLSHGDARRIAEGGAASIQ ATLLADDPVNEAPGQALTRALHEARARGEVLKRTLLADPALLTTAEMAARLGMSGEGIRLKRKRHEVLGLDFAKRGLRYP GWQILENGHLLPALPTLFGILGRDPWAVYRFLLQSHCDLGGERALDALTGGRVEAVLETAKTVATGGFS
Sequences:
>Translated_229_residues MERTAGKRSGQASPSFARGEDGAEVEGTVLVAPHALSPGDMERVAKLLEAEGVTGMRLARVWLSHGDARRIAEGGAASIQ ATLLADDPVNEAPGQALTRALHEARARGEVLKRTLLADPALLTTAEMAARLGMSGEGIRLKRKRHEVLGLDFAKRGLRYP GWQILENGHLLPALPTLFGILGRDPWAVYRFLLQSHCDLGGERALDALTGGRVEAVLETAKTVATGGFS >Mature_229_residues MERTAGKRSGQASPSFARGEDGAEVEGTVLVAPHALSPGDMERVAKLLEAEGVTGMRLARVWLSHGDARRIAEGGAASIQ ATLLADDPVNEAPGQALTRALHEARARGEVLKRTLLADPALLTTAEMAARLGMSGEGIRLKRKRHEVLGLDFAKRGLRYP GWQILENGHLLPALPTLFGILGRDPWAVYRFLLQSHCDLGGERALDALTGGRVEAVLETAKTVATGGFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24386; Mature: 24386
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERTAGKRSGQASPSFARGEDGAEVEGTVLVAPHALSPGDMERVAKLLEAEGVTGMRLAR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHH VWLSHGDARRIAEGGAASIQATLLADDPVNEAPGQALTRALHEARARGEVLKRTLLADPA HHHHCCCHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH LLTTAEMAARLGMSGEGIRLKRKRHEVLGLDFAKRGLRYPGWQILENGHLLPALPTLFGI HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHH LGRDPWAVYRFLLQSHCDLGGERALDALTGGRVEAVLETAKTVATGGFS HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MERTAGKRSGQASPSFARGEDGAEVEGTVLVAPHALSPGDMERVAKLLEAEGVTGMRLAR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHH VWLSHGDARRIAEGGAASIQATLLADDPVNEAPGQALTRALHEARARGEVLKRTLLADPA HHHHCCCHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH LLTTAEMAARLGMSGEGIRLKRKRHEVLGLDFAKRGLRYPGWQILENGHLLPALPTLFGI HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHH LGRDPWAVYRFLLQSHCDLGGERALDALTGGRVEAVLETAKTVATGGFS HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]