| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is qor [H]
Identifier: 83591724
GI number: 83591724
Start: 461217
End: 462236
Strand: Direct
Name: qor [H]
Synonym: Rru_A0384
Alternate gene names: 83591724
Gene position: 461217-462236 (Clockwise)
Preceding gene: 83591723
Following gene: 83591725
Centisome position: 10.6
GC content: 65.49
Gene sequence:
>1020_bases ATGTCCTCTGCGATGATGAAAGCCGTTCGCTTGCACGCGTTCGGCGGCCCCGAGGTGTTGCGCTACGAAGACGCGCCCCG ACCTGTCGCGGCTTCTGGCGAGGTGCTGGTCCGTGTCCATGCGGCCGGCCTCAATCCGCCCGACTGGTATTTGCGCGACG GGTACCGGGCGTTGCCCGCGGAGTGGCGGCCCGATCCCGCCTTTCCGCTGATTTTGGGTACGGACGTGTCGGGTGTCGTC GAGGCGGTCGGCGATGACGGGGGGGACTTCAGCGTCGGCGACGAGGTTTACGCGATGGTGCGCTTCCCCGAAAAGGTGAT GACCGGCAGCAACGCCTATGCCCAATACATCAAGGTGCCGGTATCGGATCTGGCGCTGAAACCGGCGGGGATCGATCATT GTCATGCGGCCGGGGCGCCCATGTCGCTGCTCACGGCGTGGCAGTTCCTGATCGATCTGGGCCATGATGAACCGAACCCC TTCCAATCAGTCCGGCATCGGCCGGTGCCGCTTGAAGGCAAAACGGTTCTCGTCAACGGCGCCGGCGGCGGCGTCGGGCA TTTGTCGGTTCAATTGGCGAAGGGGAAGGGGGCGCGCGTCATTGCCGTGGCGTCGGGCAAGAACGAGGCCTTGATGGGGG CCCTCGGCGTCTATCGGTTCATCGATTATACCCGGGCGGCGGCCGACGAGGTTGTCCATGACGTGGACCTTGTTCTCGAT ACGGTCGGCGGCCCGCAGATGGATCGCCTTCTCCGCCCCCTGAAGCGGGGGGGAGCGCTGTTCCTGGTCAACCCGCTGGG CTTCACCGCCCACAAGGAGGCGGAGAAAAGGGGGATCACGGTCTCGTCGACCCAGGTCCGCTCGAACGGCAGGCAATTGG CCGAGGCCGCGCCTCTGCTTGATAACGGAAGCGTCCGGGTGGTCGTGGATAGCTCCTACCCCTTGGCCGAGGCGTCGCGG GCCCATGAGCGCGCGGCCGCCGGCGGCATCCAAGGTAAAATCATCCTGACGATGACGTGA
Upstream 100 bases:
>100_bases TACTATCTGTTTCCTCTCTTTTTTGACAAACGGATCCCGGCTCCGCATATGCGCAGAGGTGCCCCGCTTAGGTGCCGCAT CTGAAACCGGGAAGAAAATC
Downstream 100 bases:
>100_bases TCCCCGGTCCGCCGCGCTCGCGGGCGCGGAAACGGCGGGGGCGCCCTCGTCGTCGTCCTTGAGGCCCGCGCCGTCGCCGG CTTCACCGTCTTAAAAAGTA
Product: NADPH-quinone reductase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSSAMMKAVRLHAFGGPEVLRYEDAPRPVAASGEVLVRVHAAGLNPPDWYLRDGYRALPAEWRPDPAFPLILGTDVSGVV EAVGDDGGDFSVGDEVYAMVRFPEKVMTGSNAYAQYIKVPVSDLALKPAGIDHCHAAGAPMSLLTAWQFLIDLGHDEPNP FQSVRHRPVPLEGKTVLVNGAGGGVGHLSVQLAKGKGARVIAVASGKNEALMGALGVYRFIDYTRAAADEVVHDVDLVLD TVGGPQMDRLLRPLKRGGALFLVNPLGFTAHKEAEKRGITVSSTQVRSNGRQLAEAAPLLDNGSVRVVVDSSYPLAEASR AHERAAAGGIQGKIILTMT
Sequences:
>Translated_339_residues MSSAMMKAVRLHAFGGPEVLRYEDAPRPVAASGEVLVRVHAAGLNPPDWYLRDGYRALPAEWRPDPAFPLILGTDVSGVV EAVGDDGGDFSVGDEVYAMVRFPEKVMTGSNAYAQYIKVPVSDLALKPAGIDHCHAAGAPMSLLTAWQFLIDLGHDEPNP FQSVRHRPVPLEGKTVLVNGAGGGVGHLSVQLAKGKGARVIAVASGKNEALMGALGVYRFIDYTRAAADEVVHDVDLVLD TVGGPQMDRLLRPLKRGGALFLVNPLGFTAHKEAEKRGITVSSTQVRSNGRQLAEAAPLLDNGSVRVVVDSSYPLAEASR AHERAAAGGIQGKIILTMT >Mature_338_residues SSAMMKAVRLHAFGGPEVLRYEDAPRPVAASGEVLVRVHAAGLNPPDWYLRDGYRALPAEWRPDPAFPLILGTDVSGVVE AVGDDGGDFSVGDEVYAMVRFPEKVMTGSNAYAQYIKVPVSDLALKPAGIDHCHAAGAPMSLLTAWQFLIDLGHDEPNPF QSVRHRPVPLEGKTVLVNGAGGGVGHLSVQLAKGKGARVIAVASGKNEALMGALGVYRFIDYTRAAADEVVHDVDLVLDT VGGPQMDRLLRPLKRGGALFLVNPLGFTAHKEAEKRGITVSSTQVRSNGRQLAEAAPLLDNGSVRVVVDSSYPLAEASRA HERAAAGGIQGKIILTMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=372, Percent_Identity=30.9139784946237, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI194239674, Length=352, Percent_Identity=29.5454545454545, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI13236495, Length=352, Percent_Identity=29.5454545454545, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI194239676, Length=336, Percent_Identity=29.7619047619048, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI24308257, Length=365, Percent_Identity=28.7671232876712, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI22538446, Length=360, Percent_Identity=27.7777777777778, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI22538444, Length=360, Percent_Identity=27.7777777777778, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI18379349, Length=368, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1790485, Length=358, Percent_Identity=28.4916201117318, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71987554, Length=373, Percent_Identity=26.0053619302949, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17507255, Length=359, Percent_Identity=24.7910863509749, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=269, Percent_Identity=28.996282527881, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324195, Length=259, Percent_Identity=29.7297297297297, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI24581339, Length=380, Percent_Identity=26.3157894736842, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24581341, Length=376, Percent_Identity=26.3297872340426, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35938; Mature: 35806
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAMMKAVRLHAFGGPEVLRYEDAPRPVAASGEVLVRVHAAGLNPPDWYLRDGYRALPA CCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCEECCC EWRPDPAFPLILGTDVSGVVEAVGDDGGDFSVGDEVYAMVRFPEKVMTGSNAYAQYIKVP CCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHEEEEEECCHHHHCCCCHHHHEEECC VSDLALKPAGIDHCHAAGAPMSLLTAWQFLIDLGHDEPNPFQSVRHRPVPLEGKTVLVNG HHHHEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEC AGGGVGHLSVQLAKGKGARVIAVASGKNEALMGALGVYRFIDYTRAAADEVVHDVDLVLD CCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TVGGPQMDRLLRPLKRGGALFLVNPLGFTAHKEAEKRGITVSSTQVRSNGRQLAEAAPLL CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCEEEHHHHHHCCHHHHHHCCCC DNGSVRVVVDSSYPLAEASRAHERAAAGGIQGKIILTMT CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEC >Mature Secondary Structure SSAMMKAVRLHAFGGPEVLRYEDAPRPVAASGEVLVRVHAAGLNPPDWYLRDGYRALPA CHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCEECCC EWRPDPAFPLILGTDVSGVVEAVGDDGGDFSVGDEVYAMVRFPEKVMTGSNAYAQYIKVP CCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHEEEEEECCHHHHCCCCHHHHEEECC VSDLALKPAGIDHCHAAGAPMSLLTAWQFLIDLGHDEPNPFQSVRHRPVPLEGKTVLVNG HHHHEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEC AGGGVGHLSVQLAKGKGARVIAVASGKNEALMGALGVYRFIDYTRAAADEVVHDVDLVLD CCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TVGGPQMDRLLRPLKRGGALFLVNPLGFTAHKEAEKRGITVSSTQVRSNGRQLAEAAPLL CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCEEEHHHHHHCCHHHHHHCCCC DNGSVRVVVDSSYPLAEASRAHERAAAGGIQGKIILTMT CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]