| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591723
Identifier: 83591723
GI number: 83591723
Start: 460721
End: 461086
Strand: Direct
Name: 83591723
Synonym: Rru_A0383
Alternate gene names: NA
Gene position: 460721-461086 (Clockwise)
Preceding gene: 83591722
Following gene: 83591724
Centisome position: 10.58
GC content: 58.2
Gene sequence:
>366_bases ATGACTGACCTGACCTATGTGGTGATCCAGTCCCATGTCAGCGAATTTCCTAAACCACTGACCTTGAGAAGTGGGGATCG GGTTTCGATTGGCGAGCGCTATGATGGTCCCGAAGACTGGCCAGACTGGTATCTCTGTTCGGCCCCGGGGCAAGAAGCTG GCTTTGTGCCCCGGCAAATCCTTGATCGTCATGCGGACGGCAGCGGTACGGTGCTGGAGGATTTCACCAATAGGGAACTG AGTGTTGCCAAAGGAGAAAGACTGCGTGGCAACCGCTCATTAAACGGCTGGCTCTGGGCGACACGCGCATCCGACGGCGC CACGGGATGGGTGCCCCTGGAAAGCCTAGAAGTGCGCGGCGCTTAG
Upstream 100 bases:
>100_bases CGCCAAAGTTTGATGGTATCACTTCTTTCTAATGGGACTTCTTTGCCGGTGTTTTCTGCCTTGATAGAGATAAGCTGCGA AGAAAAATTGCGGAGAAAAA
Downstream 100 bases:
>100_bases CAAAATAGTAAAAAGGGGTCAGACCCTATTTACTATCTGTTTCCTCTCTTTTTTGACAAACGGATCCCGGCTCCGCATAT GCGCAGAGGTGCCCCGCTTA
Product: SH3 domain-containing protein
Products: NA
Alternate protein names: SH3 Domain-Containing Protein; Variant SH3 Domain-Containing Protein
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTDLTYVVIQSHVSEFPKPLTLRSGDRVSIGERYDGPEDWPDWYLCSAPGQEAGFVPRQILDRHADGSGTVLEDFTNREL SVAKGERLRGNRSLNGWLWATRASDGATGWVPLESLEVRGA
Sequences:
>Translated_121_residues MTDLTYVVIQSHVSEFPKPLTLRSGDRVSIGERYDGPEDWPDWYLCSAPGQEAGFVPRQILDRHADGSGTVLEDFTNREL SVAKGERLRGNRSLNGWLWATRASDGATGWVPLESLEVRGA >Mature_120_residues TDLTYVVIQSHVSEFPKPLTLRSGDRVSIGERYDGPEDWPDWYLCSAPGQEAGFVPRQILDRHADGSGTVLEDFTNRELS VAKGERLRGNRSLNGWLWATRASDGATGWVPLESLEVRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13446; Mature: 13315
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLTYVVIQSHVSEFPKPLTLRSGDRVSIGERYDGPEDWPDWYLCSAPGQEAGFVPRQI CCCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCHHH LDRHADGSGTVLEDFTNRELSVAKGERLRGNRSLNGWLWATRASDGATGWVPLESLEVRG HHHCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCEEECC A C >Mature Secondary Structure TDLTYVVIQSHVSEFPKPLTLRSGDRVSIGERYDGPEDWPDWYLCSAPGQEAGFVPRQI CCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCHHH LDRHADGSGTVLEDFTNRELSVAKGERLRGNRSLNGWLWATRASDGATGWVPLESLEVRG HHHCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCEEECC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA