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The map label for this gene is fdhC [H]

Identifier: 83591651

GI number: 83591651

Start: 379347

End: 380279

Strand: Direct

Name: fdhC [H]

Synonym: Rru_A0311

Alternate gene names: 83591651

Gene position: 379347-380279 (Clockwise)

Preceding gene: 83591650

Following gene: 83591652

Centisome position: 8.71

GC content: 62.92

Gene sequence:

>933_bases
ATGAGTTACTACACTCCCAAGGAAATCGCGGAAAACGCCGTCAAGACCTACGGCCTGAAGGCCGCCATGCCGGCCTCCAA
AATCCTGGCCCTGGGCTTCCTGGCCGGCGGCTTCATCGCGCTGGGCGCCGAGGCCGCCACCCTGGCCGCCCATGACGCTT
CGGGCGTTGGCATCGGCCGGCTGATCAGCGGGCTGGTGTTCTCGACCGGCCTGATGATGGTGATGATCGCCGGGGCCGAG
TTGTTCACCGGCAATGTCCTGATCTGGATGGACTTCCTGGAGCGCAAGGTCGGCGTCAACGCCATGCTGCGCAATTGGAC
GCTGGTCTGGCTGTCCAATTTCGCCGGCGCCGTGGTCGTCGCCTCCATGATGGACCTGTCGGGGCTGTGGAACACCAACG
AGGCCCATGTCGGCGCCTATGTGCTCAAGACCGCCGTCGGCAAGCTGTCGCTGACCTACACCGAGGCCTTCGTTCGCGGC
ATCTTCTGTAACTGGATGGTCTGCCTGGGCGTGTGGATGGCCTATTCGGCCAAGGATACCGCCGGCAAGGTCCTGGCCAT
CTTGTTCCCGATCACGCTGTTCGTGCTGAGCAATTTCGAGCACTGCGTGGCGAATATGTACTACATCCCCGCCGCGATCT
TCGCCAAAGCCAATATCGCCGCCGTCGAAGCCAGTCATCTTGGCGACAAGCTCGATCTGCTGACCTGGTCGAATTTCATC
GTCAACAATCTGGTGCCGGTGACGCTTGGCAACATTGTTGGCGGCGCTCTTTTCGTCGGCTCGTTCTACTGGTTCACCTA
TCTGCGCGGCCAGAAGCCGACGCCGGCGCCCGCCGCCACCGTCCCCTTCTCCGTCGCCAAGTGCCCGGTGATCGCCGCTT
GCCCCGCCACCACCCTCGCCGGTTCGAAAGGCTCCCTGAGCGCAGCCGAATAG

Upstream 100 bases:

>100_bases
CGAACCTGCGGCCGCCCCCTAACTCCCTCCCTCGCCGCGCCCCGTCGCTTGGGGCGCGGACCCCACGGTGTTGCAACGAT
AAGACCGATTGAGGCGAACG

Downstream 100 bases:

>100_bases
GTCCAGCCGCCGGGGGGCGGCTTCCCCCCGGCGGTCCCAGTGCGGGGCTTGTGGGCGCGGCGTTCGGCACCGATCCGACT
TCAGGAAAAAAACGATGGCC

Product: formate/nitrite transporter

Products: formate [Periplasm]; formate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSYYTPKEIAENAVKTYGLKAAMPASKILALGFLAGGFIALGAEAATLAAHDASGVGIGRLISGLVFSTGLMMVMIAGAE
LFTGNVLIWMDFLERKVGVNAMLRNWTLVWLSNFAGAVVVASMMDLSGLWNTNEAHVGAYVLKTAVGKLSLTYTEAFVRG
IFCNWMVCLGVWMAYSAKDTAGKVLAILFPITLFVLSNFEHCVANMYYIPAAIFAKANIAAVEASHLGDKLDLLTWSNFI
VNNLVPVTLGNIVGGALFVGSFYWFTYLRGQKPTPAPAATVPFSVAKCPVIAACPATTLAGSKGSLSAAE

Sequences:

>Translated_310_residues
MSYYTPKEIAENAVKTYGLKAAMPASKILALGFLAGGFIALGAEAATLAAHDASGVGIGRLISGLVFSTGLMMVMIAGAE
LFTGNVLIWMDFLERKVGVNAMLRNWTLVWLSNFAGAVVVASMMDLSGLWNTNEAHVGAYVLKTAVGKLSLTYTEAFVRG
IFCNWMVCLGVWMAYSAKDTAGKVLAILFPITLFVLSNFEHCVANMYYIPAAIFAKANIAAVEASHLGDKLDLLTWSNFI
VNNLVPVTLGNIVGGALFVGSFYWFTYLRGQKPTPAPAATVPFSVAKCPVIAACPATTLAGSKGSLSAAE
>Mature_309_residues
SYYTPKEIAENAVKTYGLKAAMPASKILALGFLAGGFIALGAEAATLAAHDASGVGIGRLISGLVFSTGLMMVMIAGAEL
FTGNVLIWMDFLERKVGVNAMLRNWTLVWLSNFAGAVVVASMMDLSGLWNTNEAHVGAYVLKTAVGKLSLTYTEAFVRGI
FCNWMVCLGVWMAYSAKDTAGKVLAILFPITLFVLSNFEHCVANMYYIPAAIFAKANIAAVEASHLGDKLDLLTWSNFIV
NNLVPVTLGNIVGGALFVGSFYWFTYLRGQKPTPAPAATVPFSVAKCPVIAACPATTLAGSKGSLSAAE

Specific function: May act as a formate transporter [H]

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]

Homologues:

Organism=Escherichia coli, GI1787132, Length=270, Percent_Identity=36.6666666666667, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1788837, Length=259, Percent_Identity=37.8378378378378, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI87082249, Length=277, Percent_Identity=29.6028880866426, Blast_Score=89, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6321779, Length=277, Percent_Identity=29.6028880866426, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 32818; Mature: 32687

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS01005 FORMATE_NITRITE_TP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYTPKEIAENAVKTYGLKAAMPASKILALGFLAGGFIALGAEAATLAAHDASGVGIGR
CCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCHHH
LISGLVFSTGLMMVMIAGAELFTGNVLIWMDFLERKVGVNAMLRNWTLVWLSNFAGAVVV
HHHHHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHH
ASMMDLSGLWNTNEAHVGAYVLKTAVGKLSLTYTEAFVRGIFCNWMVCLGVWMAYSAKDT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AGKVLAILFPITLFVLSNFEHCVANMYYIPAAIFAKANIAAVEASHLGDKLDLLTWSNFI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCHHHHHHHHHHH
VNNLVPVTLGNIVGGALFVGSFYWFTYLRGQKPTPAPAATVPFSVAKCPVIAACPATTLA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEECCCHHCC
GSKGSLSAAE
CCCCCCCCCC
>Mature Secondary Structure 
SYYTPKEIAENAVKTYGLKAAMPASKILALGFLAGGFIALGAEAATLAAHDASGVGIGR
CCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCHHH
LISGLVFSTGLMMVMIAGAELFTGNVLIWMDFLERKVGVNAMLRNWTLVWLSNFAGAVVV
HHHHHHHHHHHHHHHHHCCHHHCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHH
ASMMDLSGLWNTNEAHVGAYVLKTAVGKLSLTYTEAFVRGIFCNWMVCLGVWMAYSAKDT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AGKVLAILFPITLFVLSNFEHCVANMYYIPAAIFAKANIAAVEASHLGDKLDLLTWSNFI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCHHHHHHHHHHH
VNNLVPVTLGNIVGGALFVGSFYWFTYLRGQKPTPAPAATVPFSVAKCPVIAACPATTLA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEECCCHHCC
GSKGSLSAAE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate [Cytoplasm]; formate [Periplasm] [C]

Specific reaction: formate [Cytoplasm] = formate [Periplasm] formate [Periplasm] = formate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9006048 [H]