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The map label for this gene is bkdR [H]

Identifier: 83591556

GI number: 83591556

Start: 268189

End: 268683

Strand: Direct

Name: bkdR [H]

Synonym: Rru_A0216

Alternate gene names: 83591556

Gene position: 268189-268683 (Clockwise)

Preceding gene: 83591554

Following gene: 83591557

Centisome position: 6.16

GC content: 65.05

Gene sequence:

>495_bases
ATGCCCAGCCGTACCGCGCCGCTTGATCGGGCCAGCATCCGCCTGCTTGAAGCGCTTCAGACCAACAGCGAGGTCAGCGT
CGCCGAATTGGCCGACCTGGCCGGGCTTTCGACCTCGCCCTGCTGGCGGCGGATCAACGAGCTCAAGGCCCGTGGCGTCA
TCACCCGCTGCGTGGCGATCGTCGATCCTTTGGCCCTGGGGCTGGCGGTGAATGTCTTCGTCCACGTCTCGCTCGAGCGC
CAGGACCGGCGGTCGCTCGATGTCTTCGACGCCGCGGTGCGCCAGCGCCCCGAGGTCATGGAATGCTATCTGATGAGCGG
CGAGTCCGATTACCTGCTGCGCGTCGTCGTCGAGGATCTGATCGAATACCAGTCACTGATGATCGATTTCCTCACCCGCA
TCCCCGGCGTCGCCAGCATCCGCTCGAGTTTCGCGCTGAGTCAGGTGAAATACACCACCGCCCTGCCCACCGCCCATCTG
AAGCGCAGCCCGTAG

Upstream 100 bases:

>100_bases
AAAGGATTAACCGGACAGCCTGGAAAATCCGTTTGATCTTGGCATCTTTGCGCCGATTATCAGAGAAATTTGCCGCCTGG
ATCCCTTACCGAGAAAAATC

Downstream 100 bases:

>100_bases
GGGGCGGGTTTTGTGTTGCGGCGCGGCAAGAAAATTGCGCCGGCCCGCGCCAAGTCCGACCGGTCCGTTCGCGGTGGCTT
GATCGCGACCGGTCCGCAAC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MPSRTAPLDRASIRLLEALQTNSEVSVAELADLAGLSTSPCWRRINELKARGVITRCVAIVDPLALGLAVNVFVHVSLER
QDRRSLDVFDAAVRQRPEVMECYLMSGESDYLLRVVVEDLIEYQSLMIDFLTRIPGVASIRSSFALSQVKYTTALPTAHL
KRSP

Sequences:

>Translated_164_residues
MPSRTAPLDRASIRLLEALQTNSEVSVAELADLAGLSTSPCWRRINELKARGVITRCVAIVDPLALGLAVNVFVHVSLER
QDRRSLDVFDAAVRQRPEVMECYLMSGESDYLLRVVVEDLIEYQSLMIDFLTRIPGVASIRSSFALSQVKYTTALPTAHL
KRSP
>Mature_163_residues
PSRTAPLDRASIRLLEALQTNSEVSVAELADLAGLSTSPCWRRINELKARGVITRCVAIVDPLALGLAVNVFVHVSLERQ
DRRSLDVFDAAVRQRPEVMECYLMSGESDYLLRVVVEDLIEYQSLMIDFLTRIPGVASIRSSFALSQVKYTTALPTAHLK
RSP

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=149, Percent_Identity=36.241610738255, Blast_Score=113, Evalue=5e-27,
Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=35.1351351351351, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18229; Mature: 18098

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRTAPLDRASIRLLEALQTNSEVSVAELADLAGLSTSPCWRRINELKARGVITRCVAI
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VDPLALGLAVNVFVHVSLERQDRRSLDVFDAAVRQRPEVMECYLMSGESDYLLRVVVEDL
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
IEYQSLMIDFLTRIPGVASIRSSFALSQVKYTTALPTAHLKRSP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
PSRTAPLDRASIRLLEALQTNSEVSVAELADLAGLSTSPCWRRINELKARGVITRCVAI
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VDPLALGLAVNVFVHVSLERQDRRSLDVFDAAVRQRPEVMECYLMSGESDYLLRVVVEDL
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
IEYQSLMIDFLTRIPGVASIRSSFALSQVKYTTALPTAHLKRSP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]