| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591554
Identifier: 83591554
GI number: 83591554
Start: 266139
End: 267017
Strand: Direct
Name: 83591554
Synonym: Rru_A0214
Alternate gene names: NA
Gene position: 266139-267017 (Clockwise)
Preceding gene: 83591548
Following gene: 83591556
Centisome position: 6.11
GC content: 65.07
Gene sequence:
>879_bases TTGAGCTTTCTCAAGCACGTACAGGATTGCAATACCCACGATCTGTCCAATTTCGTGCGCTTCGTCATCGAAGGCCGACG GGTTGGTTGGGTGCGCAAGGCCCTGGCCCAGCGTTTGAAGGCGCATGGGCGCGTCTTCGACGTCACCCGCGACGCCGTTT TGCTCTCGGCCTCGTTGCGCACGCCGCAAAGCCGGACGCGGGCGGTGGCCGATGTTGTCGACCGGCTGGCCGACGAGGGC GTGGTTCCGGCGCCGCGCGGCGAGCTTTACCGGGTGAACCAAAGCTGGGGCGAACCCACCTTGATGCTGCTCGACCGGGC GGTGGTGCCGACCTTTGGCGTGCGCGCCTATGGCGTCCATCTCAACGGCTACGTCGGCGCCGGCGCCGATCTGCATCTCT GGATCGGCCGGCGCAGCCCGGATAAATCGGTGGCGCCCGGCAAGCTCGACAATATGGTGGCCGGCGGTCAGCCCGCCGAT CTCAGCTTGCGCCAGAACCTGATCAAGGAATGCGCCGAAGAGGCCGATCTGCCCGAGGCCCTGGCCCGTCAGGCGATTCC GGTGGGGGCGATCACCTATTGCATGGAAAGCCCGGCGGGCATCAAGCCCGACACCTTGTTCCTCTATGATCTGGCCCTGC CCGAGGATTTCCGCCCCCATAACACCGATGGCGAGATGGCCGACTTCATGCTGTGGCCGGCGGCCAAGGTGGTGGAGGCG GTGCGCACCACCGAGGCCTTCAAGTTCAACGTCAATCTGACGGTGATCGATTTCGCCATTCGCCATGGCCTGATCGATCC CGACAACGAACCCGATTATCAGGAAATCCTGGCCGGTCTGCGCGGTCGTCCGCGCGAACGCGCCGCCTCGCCGGCCTGA
Upstream 100 bases:
>100_bases TGGTCGGTGGACGGGGGCGTTCCAGGGGAGTCGTCGACAGGCCCGACGATGCTCCGACCGCGGCTTGGTGGCCTGGTGAA CCCTTTGTGGAGCTGCCCCC
Downstream 100 bases:
>100_bases GGAAGCCTGCTCCCCAAATGGCGGCCCGCCTCAGGCCGTCGGCCAATTGGCCTTGCCGGCCTGCGAGCGCAAGGCGGTAT CGGCGCGCCCGGCCGCCGCC
Product: MutT/nudix family protein
Products: NA
Alternate protein names: Thiamin Pyrophosphokinase; NUDIX Domain-Containing Protein; Nucleoside Diphosphate; Thiamine Pyrophosphokinase; Nucleoside Diphosphate Hydrolase Protein; NTP Pyrophosphohydrolase; MutT/Nudix Family Protein; NUDIX Domain Family Protein; Nudix Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; NUDIX Domain-Containing; Hydrolase NUDIX Family
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSFLKHVQDCNTHDLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTRDAVLLSASLRTPQSRTRAVADVVDRLADEG VVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPAD LSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEA VRTTEAFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGRPRERAASPA
Sequences:
>Translated_292_residues MSFLKHVQDCNTHDLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTRDAVLLSASLRTPQSRTRAVADVVDRLADEG VVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPAD LSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEA VRTTEAFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGRPRERAASPA >Mature_291_residues SFLKHVQDCNTHDLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTRDAVLLSASLRTPQSRTRAVADVVDRLADEGV VPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADL SLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAV RTTEAFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGRPRERAASPA
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322602, Length=283, Percent_Identity=29.6819787985866, Blast_Score=123, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32230; Mature: 32099
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLKHVQDCNTHDLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTRDAVLLSASLR CCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECHHHHEEEHHCC TPQSRTRAVADVVDRLADEGVVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVH CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEE LNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEA ECCEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHH LARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEA HHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHH VRTTEAFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGRPRERAASPA HHHHHEEEEEEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCC >Mature Secondary Structure SFLKHVQDCNTHDLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTRDAVLLSASLR CHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECHHHHEEEHHCC TPQSRTRAVADVVDRLADEGVVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVH CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEE LNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEA ECCEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHH LARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEA HHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHH VRTTEAFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGRPRERAASPA HHHHHEEEEEEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA