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The map label for this gene is mrnC [H]

Identifier: 83591299

GI number: 83591299

Start: 2589429

End: 2589812

Strand: Reverse

Name: mrnC [H]

Synonym: Moth_2483

Alternate gene names: 83591299

Gene position: 2589812-2589429 (Counterclockwise)

Preceding gene: 83591300

Following gene: 83591298

Centisome position: 98.52

GC content: 63.54

Gene sequence:

>384_bases
GTGGATTTCGTTGCCAACCTCTCTCCCCTGGCCCTGGCTTATGTCGGCGATGCCGTTTATGAATTATTAGTCCGGGCCCA
CCTGGTAGGCCGGGGACCGGCGAAGCCGGAGCAACTGCACCGGGAGGCCCTGAAGTACGTCCGGGCCACTGCCCAGGCCC
GGGTGGTCCCGGCCCTGGAGGAATATTTAACCCCTGCCGAAAAGGACATCCTTCGCCGCGGCCGCAACGCCCGGCCGGGA
CACCTGCCCCGTACCGCCGCCCCGGCGGAATATCATTCCAGCACGGCCCTGGAGAGCCTCCTGGGTTACCTTTATCTGCA
GGGCGACTGGGCCAGGGTGGAGGAACTGGCGCACCTGATTTTTAAACTGGCGGAACAAGACTAA

Upstream 100 bases:

>100_bases
ACTGGGCCACGGCCGATACCATCCGGGACCGGTTGAAGGAGCTGGGGATCGTCCTGGAGGATACCCCCCGCGGCCCGCGT
TGGAAAAGGAGTTAAAGGTT

Downstream 100 bases:

>100_bases
AGGGACTAATTACCACCGGCGAGAGTAAAGACCGCCTGGCGGGAGTGGAAGAGACAATGATAATTGAACAACCCCGGGTA
CTTGTACCCGAAAAGGCCCT

Product: ribonuclease III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDFVANLSPLALAYVGDAVYELLVRAHLVGRGPAKPEQLHREALKYVRATAQARVVPALEEYLTPAEKDILRRGRNARPG
HLPRTAAPAEYHSSTALESLLGYLYLQGDWARVEELAHLIFKLAEQD

Sequences:

>Translated_127_residues
MDFVANLSPLALAYVGDAVYELLVRAHLVGRGPAKPEQLHREALKYVRATAQARVVPALEEYLTPAEKDILRRGRNARPG
HLPRTAAPAEYHSSTALESLLGYLYLQGDWARVEELAHLIFKLAEQD
>Mature_127_residues
MDFVANLSPLALAYVGDAVYELLVRAHLVGRGPAKPEQLHREALKYVRATAQARVVPALEEYLTPAEKDILRRGRNARPG
HLPRTAAPAEYHSSTALESLLGYLYLQGDWARVEELAHLIFKLAEQD

Specific function: Might be an RNase involved in RNA processing [H]

COG id: COG1939

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000999
- InterPro:   IPR008226 [H]

Pfam domain/function: PF00636 Ribonuclease_3 [H]

EC number: NA

Molecular weight: Translated: 14157; Mature: 14157

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFVANLSPLALAYVGDAVYELLVRAHLVGRGPAKPEQLHREALKYVRATAQARVVPALE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EYLTPAEKDILRRGRNARPGHLPRTAAPAEYHSSTALESLLGYLYLQGDWARVEELAHLI
HHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FKLAEQD
HHHHCCC
>Mature Secondary Structure
MDFVANLSPLALAYVGDAVYELLVRAHLVGRGPAKPEQLHREALKYVRATAQARVVPALE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EYLTPAEKDILRRGRNARPGHLPRTAAPAEYHSSTALESLLGYLYLQGDWARVEELAHLI
HHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FKLAEQD
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]