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The map label for this gene is xylA [H]

Identifier: 83590856

GI number: 83590856

Start: 2114823

End: 2115965

Strand: Reverse

Name: xylA [H]

Synonym: Moth_2026

Alternate gene names: 83590856

Gene position: 2115965-2114823 (Counterclockwise)

Preceding gene: 83590857

Following gene: 83590855

Centisome position: 80.49

GC content: 54.16

Gene sequence:

>1143_bases
ATGCAAGATTTAAGCTACCAGGCCACCCGCCGCTCGCCGGAAGAGTTGATCAGGCACTTGCAGAACTTTGAGCTCAACCT
CCGCTTCTCAGCCGGAATTTGGTTTTTTTCCGGCAGCAACAGCCGCTTCCATATCCGCTACGGCCAAGAAATGAGCATTG
AGGAACGCTTGGAGAAATTCGCCAGCCTGAAGGAGTACGGGCTGGAGGGTATCGAGGCCCATTACCCCAATGAGATTAAC
GAACATAACCTGCCGCTTTATAAGGATTTTTGCCGGGACACCGGCATGAAGGTGGTCACCGTTGTACCCAACCTTTTCTA
TGAAGAACAGTACTGCTACGGTTCTTTATCGTCGCCCCTTCCGGCTGCCAGGCAGTCCGCCATCCAGCGCGTTAAAGAAA
CGCTAGAAATAAATAAGGAACTGGGGACAGAGTTCATGGTTGTCTGGCCGGGTATCGACGGTTACGAAAATCCTTTCGGT
ATCGATTTCAGCGAGATGCGCCGTCGGTTCGCCGCCGGCCTGGCAGAAGCTATGGACGCCGTACCGGGAATTAGGGTGGC
GATGGAGCCCAAGCCCTACGAACCCCGGGGCAGAATAATCTATGGCACCACACCGGAAGGAATTCTCTTGGCGGAAAAAG
TAGAAGGATTGTTACAAAATCCTGTTAACAAAGAACTGCTGCAGCAGGGTTATACCCTGCTGGGACTCAACCCGGAAATC
GGCCACGTCATCATGGGTTATGAAGACCTGCCCTATGCCTTGAGCCTGCCCCTGGAATACGGTCGCCTGGTGCATACCCA
TTGGAACAGCCAGCCCCTGGGTAATTACGATCAGGACCTAAACGTCGGTGTAATCGCGCCCGAACAGGCCGAGGCCGCCC
TTTACGTCCTGAAGATGCACGGTTATCAGGGGTGGTTCGGTCTGGATATCAATCCGGAGCGGATGCCGGTGGAAAGGGCG
GTTATTAATAGCATGGATGCCATCCGGGCCATGAACGACCGCATCAACAATCTCGATCACGAGCTGGTAGTTGCCTGCGT
CCAGGACCCGGAACGTTATGCCGGTTACTTAGAAGCTCTCCTTATCCGGGCCCGGGCTAGAAACCCTGAGATCCTCAGCC
CCTTAAGCCTCCAAGGAGTATAA

Upstream 100 bases:

>100_bases
TCCCACCAGCAATCTAATGACGCACTGAAATGACTGCAAAATCTGTCCAGAACCGATTTCGGTAGAAGACATTCTTTTAA
GCTAGAAAAGAGGAGGAACC

Downstream 100 bases:

>100_bases
TCCGCCAGTAATTTTAAAACAGTTACCGGACGACGACTTCCATTTCAGCATAGACGTTTTCAGAAGGGAAAAGGAATTAT
GCCGTATCTTCTCGGGATTG

Product: xylose isomerase-like TIM barrel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQDLSYQATRRSPEELIRHLQNFELNLRFSAGIWFFSGSNSRFHIRYGQEMSIEERLEKFASLKEYGLEGIEAHYPNEIN
EHNLPLYKDFCRDTGMKVVTVVPNLFYEEQYCYGSLSSPLPAARQSAIQRVKETLEINKELGTEFMVVWPGIDGYENPFG
IDFSEMRRRFAAGLAEAMDAVPGIRVAMEPKPYEPRGRIIYGTTPEGILLAEKVEGLLQNPVNKELLQQGYTLLGLNPEI
GHVIMGYEDLPYALSLPLEYGRLVHTHWNSQPLGNYDQDLNVGVIAPEQAEAALYVLKMHGYQGWFGLDINPERMPVERA
VINSMDAIRAMNDRINNLDHELVVACVQDPERYAGYLEALLIRARARNPEILSPLSLQGV

Sequences:

>Translated_380_residues
MQDLSYQATRRSPEELIRHLQNFELNLRFSAGIWFFSGSNSRFHIRYGQEMSIEERLEKFASLKEYGLEGIEAHYPNEIN
EHNLPLYKDFCRDTGMKVVTVVPNLFYEEQYCYGSLSSPLPAARQSAIQRVKETLEINKELGTEFMVVWPGIDGYENPFG
IDFSEMRRRFAAGLAEAMDAVPGIRVAMEPKPYEPRGRIIYGTTPEGILLAEKVEGLLQNPVNKELLQQGYTLLGLNPEI
GHVIMGYEDLPYALSLPLEYGRLVHTHWNSQPLGNYDQDLNVGVIAPEQAEAALYVLKMHGYQGWFGLDINPERMPVERA
VINSMDAIRAMNDRINNLDHELVVACVQDPERYAGYLEALLIRARARNPEILSPLSLQGV
>Mature_380_residues
MQDLSYQATRRSPEELIRHLQNFELNLRFSAGIWFFSGSNSRFHIRYGQEMSIEERLEKFASLKEYGLEGIEAHYPNEIN
EHNLPLYKDFCRDTGMKVVTVVPNLFYEEQYCYGSLSSPLPAARQSAIQRVKETLEINKELGTEFMVVWPGIDGYENPFG
IDFSEMRRRFAAGLAEAMDAVPGIRVAMEPKPYEPRGRIIYGTTPEGILLAEKVEGLLQNPVNKELLQQGYTLLGLNPEI
GHVIMGYEDLPYALSLPLEYGRLVHTHWNSQPLGNYDQDLNVGVIAPEQAEAALYVLKMHGYQGWFGLDINPERMPVERA
VINSMDAIRAMNDRINNLDHELVVACVQDPERYAGYLEALLIRARARNPEILSPLSLQGV

Specific function: Unknown

COG id: COG4952

COG function: function code M; Predicted sugar isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013453
- InterPro:   IPR001998 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.5 [H]

Molecular weight: Translated: 43240; Mature: 43240

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLSYQATRRSPEELIRHLQNFELNLRFSAGIWFFSGSNSRFHIRYGQEMSIEERLEKF
CCCCCCHHHCCCHHHHHHHHHCCEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHH
ASLKEYGLEGIEAHYPNEINEHNLPLYKDFCRDTGMKVVTVVPNLFYEEQYCYGSLSSPL
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCC
PAARQSAIQRVKETLEINKELGTEFMVVWPGIDGYENPFGIDFSEMRRRFAAGLAEAMDA
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
VPGIRVAMEPKPYEPRGRIIYGTTPEGILLAEKVEGLLQNPVNKELLQQGYTLLGLNPEI
CCCCEEEECCCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCCCHHHHHCCCEEEECCCCC
GHVIMGYEDLPYALSLPLEYGRLVHTHWNSQPLGNYDQDLNVGVIAPEQAEAALYVLKMH
CEEEECCCCCCEEEECCHHHCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC
GYQGWFGLDINPERMPVERAVINSMDAIRAMNDRINNLDHELVVACVQDPERYAGYLEAL
CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHH
LIRARARNPEILSPLSLQGV
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDLSYQATRRSPEELIRHLQNFELNLRFSAGIWFFSGSNSRFHIRYGQEMSIEERLEKF
CCCCCCHHHCCCHHHHHHHHHCCEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHH
ASLKEYGLEGIEAHYPNEINEHNLPLYKDFCRDTGMKVVTVVPNLFYEEQYCYGSLSSPL
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCC
PAARQSAIQRVKETLEINKELGTEFMVVWPGIDGYENPFGIDFSEMRRRFAAGLAEAMDA
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
VPGIRVAMEPKPYEPRGRIIYGTTPEGILLAEKVEGLLQNPVNKELLQQGYTLLGLNPEI
CCCCEEEECCCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCCCHHHHHCCCEEEECCCCC
GHVIMGYEDLPYALSLPLEYGRLVHTHWNSQPLGNYDQDLNVGVIAPEQAEAALYVLKMH
CEEEECCCCCCEEEECCHHHCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC
GYQGWFGLDINPERMPVERAVINSMDAIRAMNDRINNLDHELVVACVQDPERYAGYLEAL
CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHH
LIRARARNPEILSPLSLQGV
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10089429; 10329168 [H]