Click here to switch to the map view.

The map label for this gene is pqqE [H]

Identifier: 83590095

GI number: 83590095

Start: 1288069

End: 1289136

Strand: Reverse

Name: pqqE [H]

Synonym: Moth_1247

Alternate gene names: 83590095

Gene position: 1289136-1288069 (Counterclockwise)

Preceding gene: 83590096

Following gene: 83590094

Centisome position: 49.04

GC content: 60.86

Gene sequence:

>1068_bases
GTGGTTGTCTGGAACTGCACGCGGGACTGCAACCTCAAGTGCCGGCATTGTTATGCCGGTGCCGGGAGCGGGGTGGCCGG
GGACGAAATGACGACACCGGAGGCCAGGGACTTCCTGGACCAGCTGGTAGCTTTCCGGGTGCCGGTCCTCCTCTTATCAG
GGGGCGAGCCCCTGGTACGGCCGGATATCTTTGACCTGATGGCCACCGCCGTCAAGGGGGGACTGCGGGTCACCCTTTCC
ACCAACGGCACCCTTATTGATCGCAGCACCGCCCGGGAACTGAAAAAAATCGGCATCAGCTATGTGGGTATCAGCCTGGA
TGGCATTGAGTCCAAACATGACGCCTTCCGGGGCGTGAAGGGGGCCTTCCAGGCAACCCTGGAAGGCATCCGCAACTGCC
TGGCGGTAGACCAGCGGGTGGGCTTGCGCTTTACCATCAGCCGGGCCAATGTCGACCAGCTGGAGGAAATTTTTTACCTG
ATCCGGGAAGAGAACATTCCCCGGGCCTGTTTCTACCACCTGGTTTACAGCGGCCGGGGCAGTGAACTGGCCGTTGAAGA
CCTGAATCATGAAGAAAGCCGGGCGGTTATGGATTTTCTGATTACAGCCGCCAGGCGCCTGAAAAAGCAGGGCCGGGAAG
TCGAGATTTTAACGGTGGACAATCATGCCGACGGAATCTACCTCTACCTGAAATTAATCCGGGAAGACCCGGAACGGGCG
GTGGCCGTCCGGGAGCTATTGCGCCTGAATGGCGGTAACCGCAGCGGTATCGCCATCGGCGCCGTCGACTGGGCCGGTGC
CGTCCATCCGGACCAGTTCACCATGCACCACATCCTGGGGAACGTCCGGGAACGCCCCTTCGGCGAGATATGGACGGATC
TCAGCAACCCCCTGCTGAAGGGCCTGCGGGACCGCAAACCCCTGTTGAAGGGTCGCTGCCGTACCTGCGCCTGGCTGGAC
TTGTGCAATGGCAACTGCCGCGCCCGGGCGGAAAGCGTCACCGGCGACTTCTGGGAATCCGACCCAGCCTGTTATTTGAC
GGACGGGGAAATATCAGATAGGAGGTAG

Upstream 100 bases:

>100_bases
CACAAAGCTGCTTTTTGATGATAACTACTTTGGCGACAACCTGCGTTACAGCCAGGCTGTCCGTGAGGCGACGGCCGGCG
CCCGCCGGGATAGCGGGCCG

Downstream 100 bases:

>100_bases
TTTTGATGACCGGTTTTCCTATTTGCCGGCCGCGGCGCCTGCGGCAGAACGCAACACTGAGGGCCATGGTCCGGGAGACG
GAAATTAACCCCCGCGACCT

Product: radical SAM family protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MVVWNCTRDCNLKCRHCYAGAGSGVAGDEMTTPEARDFLDQLVAFRVPVLLLSGGEPLVRPDIFDLMATAVKGGLRVTLS
TNGTLIDRSTARELKKIGISYVGISLDGIESKHDAFRGVKGAFQATLEGIRNCLAVDQRVGLRFTISRANVDQLEEIFYL
IREENIPRACFYHLVYSGRGSELAVEDLNHEESRAVMDFLITAARRLKKQGREVEILTVDNHADGIYLYLKLIREDPERA
VAVRELLRLNGGNRSGIAIGAVDWAGAVHPDQFTMHHILGNVRERPFGEIWTDLSNPLLKGLRDRKPLLKGRCRTCAWLD
LCNGNCRARAESVTGDFWESDPACYLTDGEISDRR

Sequences:

>Translated_355_residues
MVVWNCTRDCNLKCRHCYAGAGSGVAGDEMTTPEARDFLDQLVAFRVPVLLLSGGEPLVRPDIFDLMATAVKGGLRVTLS
TNGTLIDRSTARELKKIGISYVGISLDGIESKHDAFRGVKGAFQATLEGIRNCLAVDQRVGLRFTISRANVDQLEEIFYL
IREENIPRACFYHLVYSGRGSELAVEDLNHEESRAVMDFLITAARRLKKQGREVEILTVDNHADGIYLYLKLIREDPERA
VAVRELLRLNGGNRSGIAIGAVDWAGAVHPDQFTMHHILGNVRERPFGEIWTDLSNPLLKGLRDRKPLLKGRCRTCAWLD
LCNGNCRARAESVTGDFWESDPACYLTDGEISDRR
>Mature_355_residues
MVVWNCTRDCNLKCRHCYAGAGSGVAGDEMTTPEARDFLDQLVAFRVPVLLLSGGEPLVRPDIFDLMATAVKGGLRVTLS
TNGTLIDRSTARELKKIGISYVGISLDGIESKHDAFRGVKGAFQATLEGIRNCLAVDQRVGLRFTISRANVDQLEEIFYL
IREENIPRACFYHLVYSGRGSELAVEDLNHEESRAVMDFLITAARRLKKQGREVEILTVDNHADGIYLYLKLIREDPERA
VAVRELLRLNGGNRSGIAIGAVDWAGAVHPDQFTMHHILGNVRERPFGEIWTDLSNPLLKGLRDRKPLLKGRCRTCAWLD
LCNGNCRARAESVTGDFWESDPACYLTDGEISDRR

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39591; Mature: 39591

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVWNCTRDCNLKCRHCYAGAGSGVAGDEMTTPEARDFLDQLVAFRVPVLLLSGGEPLVR
CEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCC
PDIFDLMATAVKGGLRVTLSTNGTLIDRSTARELKKIGISYVGISLDGIESKHDAFRGVK
CHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
GAFQATLEGIRNCLAVDQRVGLRFTISRANVDQLEEIFYLIREENIPRACFYHLVYSGRG
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
SELAVEDLNHEESRAVMDFLITAARRLKKQGREVEILTVDNHADGIYLYLKLIREDPERA
CEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCHHHH
VAVRELLRLNGGNRSGIAIGAVDWAGAVHPDQFTMHHILGNVRERPFGEIWTDLSNPLLK
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLRDRKPLLKGRCRTCAWLDLCNGNCRARAESVTGDFWESDPACYLTDGEISDRR
HHHHCCHHHHCCCCCEEEEEECCCCCCEEHHHCCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MVVWNCTRDCNLKCRHCYAGAGSGVAGDEMTTPEARDFLDQLVAFRVPVLLLSGGEPLVR
CEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCC
PDIFDLMATAVKGGLRVTLSTNGTLIDRSTARELKKIGISYVGISLDGIESKHDAFRGVK
CHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
GAFQATLEGIRNCLAVDQRVGLRFTISRANVDQLEEIFYLIREENIPRACFYHLVYSGRG
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
SELAVEDLNHEESRAVMDFLITAARRLKKQGREVEILTVDNHADGIYLYLKLIREDPERA
CEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCHHHH
VAVRELLRLNGGNRSGIAIGAVDWAGAVHPDQFTMHHILGNVRERPFGEIWTDLSNPLLK
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLRDRKPLLKGRCRTCAWLDLCNGNCRARAESVTGDFWESDPACYLTDGEISDRR
HHHHCCHHHHCCCCCEEEEEECCCCCCEEHHHCCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA