Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83313500

Identifier: 83313500

GI number: 83313500

Start: 4805894

End: 4806379

Strand: Reverse

Name: 83313500

Synonym: amb4401

Alternate gene names: NA

Gene position: 4806379-4805894 (Counterclockwise)

Preceding gene: 83313501

Following gene: 83313497

Centisome position: 96.76

GC content: 63.79

Gene sequence:

>486_bases
ATGACCATTGCGTGGCGTGAGGCCATGAGCGTGGGCGACGAGACCATCGATGCGGATCACCGGCATCTGGTCGACATGAT
CAACGTCTTCGAGGCTGCCGTGGTCGGCAAGATCGACCACAAGCGGGTCGCCCGCGTGCTGCTGGGGCTGGTGGAATACA
CCGGCGCCCATTTCAAGCGCGAGGAAGAGATCCAGGTGCTGATCCGCTACCCCTACCATGATTCCCACCGCCATGGGCAC
CGGGACGTTCTCAAGCAGCTGACGGGAATCGCCCAGCAATACACCCAGGCCACCGGGACGGCCCGTGACGAGATGATCCG
CGGGCTGGGCGGCTTTCTACGCGAATGGCTGGTCGATCACATCATCCAGTCCGATCTGCGCATGAAGCCCTATGTGCTGA
AGTATCAGGCCGAGACCCAGGACGCCAAGAAGCGCCAGCGCGCCGCCGTCGCCCTGTCCGAGCAGATCGCCGGGGTGGGG
CACTGA

Upstream 100 bases:

>100_bases
TATCGCTGCCATCGGTAGAACTTTACCGAAATGGATATGGCCCCAGTTGTCGCGCCCCGGCTATCCTCTTTGAGGGGTGG
GCCAGAAAAGGGGCGAGGCC

Downstream 100 bases:

>100_bases
GGGCGAAGGGGGTCATCATCGACACCCCCCGACAGGAAAAAGCCCCCGCCGGTCTCCCGGCGGGGGCTTTGCCTTGATCA
GGTTCCGTCGGTTCAGACGG

Product: hemerythrin-like protein

Products: NA

Alternate protein names: Methyl-Accepting Chemotaxis Sensory Transducer; Hemerythrin; Hemerythrin Family Protein; Methyl-Accepting Chemotaxis Protein; Hemerythrin-Related Protein; Sensory Box Sensor Histidine Kinase/Response Regulator

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKREEEIQVLIRYPYHDSHRHGH
RDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDHIIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVG
H

Sequences:

>Translated_161_residues
MTIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKREEEIQVLIRYPYHDSHRHGH
RDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDHIIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVG
H
>Mature_160_residues
TIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKREEEIQVLIRYPYHDSHRHGHR
DVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDHIIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVGH

Specific function: Unknown

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18409; Mature: 18278

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKR
CCCCHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
EEEIQVLIRYPYHDSHRHGHRDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDH
HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVGH
HHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKR
CCCHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
EEEIQVLIRYPYHDSHRHGHRDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDH
HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVGH
HHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA