| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is accA1 [H]
Identifier: 83313341
GI number: 83313341
Start: 4648695
End: 4650686
Strand: Reverse
Name: accA1 [H]
Synonym: amb4242
Alternate gene names: 83313341
Gene position: 4650686-4648695 (Counterclockwise)
Preceding gene: 83313342
Following gene: 83313340
Centisome position: 93.63
GC content: 65.91
Gene sequence:
>1992_bases ATGTTCACTAAGATTCTGATCGCCAACCGCGGCGAAATCGCCTGTCGGGTCATCAAGACCGCCAAGAAGATGGGCATCAA GACGGTGGCGGTGTATTCCGACGCCGACAAGGATGCGCTGCACGTGTCCATGGCCGACGAGGCCGTGCATATCGGCCCGG CGGCCTCGGCCCAGTCCTATCTGGTGATCGACAAGATCGTCGACGCCTGCAAGCAGACCGGCGCCCAGGCCGTCCATCCC GGCTACGGCTTTCTGTCCGAGAAGCGCGAGTTCCAGGAGGCCCTGGGCAAGGCGGGCATCGCCTTCATCGGCCCCGACGC CCACGCCATCTTCGCCATGGGCGACAAGATCGAGTCCAAGAAGCTGGCCCGCGAAGCCGGTGTCAACACGGTCCCCGGCT ATCTCGGCGTCATCAAGGACGCCGACGAGGCGGTGAAGATCGCTCGTGAAATCGGCTATCCCGTCATGCTGAAGGCTTCG GCCGGCGGCGGCGGCAAGGGCATGCGCCTGGCCTGGAACGACGCCGAGGCCCACGAGGGCTTCACCAGCGCCACCAACGA GGCCAAGACCAGCTTCGGCGACGACCGCGTCTTCGTGGAAAAGTTCATCGAGCAGCCCCGCCACATCGAGATCCAGGTGC TGGCCGACGGCCAGGGCACGACCCTGTATCTGGGCGAGCGTGAATGCTCGATCCAGCGCCGTCACCAGAAGGTGATCGAA GAGGCCCCGTCGCCCTTCCTGACCCCCGAGACCCGCAAGGCCATGGGCGAGCAGGCCTGCGCCCTGGCCCGCATCGTCAA CTACAAGTCGGCCGGCACGGTGGAGTTCATCGTCGGCGGCGCCACCGGCGAGTTCTACTTCCTGGAGATGAATACCCGTC TGCAGGTGGAGCATCCGGTCACCGAGATGATCACCGGCCTCGATCTGGTCGAGCAGATGATCCGCGTCGCGTCGGGCGAG AAGCTGTCCATCACCCAGGACGACGTGAAGCTGAACGGCTGGTCCATGGAAGCCCGCGTCTATGCCGAGGACCCCTTCCG CAACTTCCTGCCGTCGACCGGTCGCCTGACCCGCTACCAGCCGCCGGCCGAGAGCGCTCATGTCCGCGTCGACACCGGCG TCTACGAGGGCGGCGAGATCAGCATGTTCTACGATCCCATGATCGCCAAGCTGATCACCTATGGCCCGACCCGCGACGCC GCCATCGCCCATATGCGTCAGGCGCTGGACGAGTACTATATCCGTGGCCTCAGCCACAACATCCCCTTCCTGGCCTCGCT GTTCTCCAAGGAACGCTTCGTCAAGGGGGCGCTGACCACCAACTTCATCGCCGAGGAATACGCCAACGGCTTCCACGCCA ACGACCTGCCCGCCGATGATCCGACGGTGCTGATCGCCGTGGCCGCCGCCGCCAACCGCCGCATTCACGAGCGCGACACC CGTATCTCGGGCCAGTTCCCCGGCCACGAGATGAAGGCCGGCGACGAGTGGGTGGTGGTGATGAGCGGCCAGTACCACGA CATCACCGTGCGTCCCGCCGAGAACGGCTATGCCGTGGCCCTGGGCGGCGAGACGGTGGACGTGCGCACCGACTGGCAGA TCGGCGAGCCCCTGTTCCGCGCCAATGTGGACGGCCGCGCCGTGGCCGTGCAGATCGAGCGGGTGGGGTCGGGCCTGCGC CTGGCCCATGCCGGGTCGCGGGTCGACGTGCTGGTGCTGACCCCGCACGCCGCCAAGATGAACAAGCTGATGCCGTTCAA GGCGCCGCCGGATATGAGCAAGTATCTGCTGTCGCCCATGCCCGGCCTGCTGGTCAAGCTGCTGGTCGAGGCCGGTCAGG AGGTCAAGGCCGGCGAGCCGCTGGCCGTGGTCGAGGCCATGAAGATGGAAAACATCCTGAAGGCCGAGCGCGACGCCACG GTCGCCAAGACCCATGCGGCCTCCGGTGATTCCCTGGCGGTGGACCAGAAGATCATCGAGTTCGCCTCATGA
Upstream 100 bases:
>100_bases AGGAAGCGCATCTGCCGCTCGCTGGCCATGCTGAAGGACAAGGACGTGAAGAATCCGTGGCGCAAGCACGGCAACATTCC GCTGTAAGGGGGACGATCGC
Downstream 100 bases:
>100_bases GCAAAGTCCCGGGGATCGACCGCCTGCTGGCCAATAACAAGGCCTGGGCCGAGGAGACGGAGCGTACCAAGCCCGGCTTC TTCGCCCATCTGGCAGAGCA
Product: Acetyl/propionyl-CoA carboxylase, alpha subunit
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MFTKILIANRGEIACRVIKTAKKMGIKTVAVYSDADKDALHVSMADEAVHIGPAASAQSYLVIDKIVDACKQTGAQAVHP GYGFLSEKREFQEALGKAGIAFIGPDAHAIFAMGDKIESKKLAREAGVNTVPGYLGVIKDADEAVKIAREIGYPVMLKAS AGGGGKGMRLAWNDAEAHEGFTSATNEAKTSFGDDRVFVEKFIEQPRHIEIQVLADGQGTTLYLGERECSIQRRHQKVIE EAPSPFLTPETRKAMGEQACALARIVNYKSAGTVEFIVGGATGEFYFLEMNTRLQVEHPVTEMITGLDLVEQMIRVASGE KLSITQDDVKLNGWSMEARVYAEDPFRNFLPSTGRLTRYQPPAESAHVRVDTGVYEGGEISMFYDPMIAKLITYGPTRDA AIAHMRQALDEYYIRGLSHNIPFLASLFSKERFVKGALTTNFIAEEYANGFHANDLPADDPTVLIAVAAAANRRIHERDT RISGQFPGHEMKAGDEWVVVMSGQYHDITVRPAENGYAVALGGETVDVRTDWQIGEPLFRANVDGRAVAVQIERVGSGLR LAHAGSRVDVLVLTPHAAKMNKLMPFKAPPDMSKYLLSPMPGLLVKLLVEAGQEVKAGEPLAVVEAMKMENILKAERDAT VAKTHAASGDSLAVDQKIIEFAS
Sequences:
>Translated_663_residues MFTKILIANRGEIACRVIKTAKKMGIKTVAVYSDADKDALHVSMADEAVHIGPAASAQSYLVIDKIVDACKQTGAQAVHP GYGFLSEKREFQEALGKAGIAFIGPDAHAIFAMGDKIESKKLAREAGVNTVPGYLGVIKDADEAVKIAREIGYPVMLKAS AGGGGKGMRLAWNDAEAHEGFTSATNEAKTSFGDDRVFVEKFIEQPRHIEIQVLADGQGTTLYLGERECSIQRRHQKVIE EAPSPFLTPETRKAMGEQACALARIVNYKSAGTVEFIVGGATGEFYFLEMNTRLQVEHPVTEMITGLDLVEQMIRVASGE KLSITQDDVKLNGWSMEARVYAEDPFRNFLPSTGRLTRYQPPAESAHVRVDTGVYEGGEISMFYDPMIAKLITYGPTRDA AIAHMRQALDEYYIRGLSHNIPFLASLFSKERFVKGALTTNFIAEEYANGFHANDLPADDPTVLIAVAAAANRRIHERDT RISGQFPGHEMKAGDEWVVVMSGQYHDITVRPAENGYAVALGGETVDVRTDWQIGEPLFRANVDGRAVAVQIERVGSGLR LAHAGSRVDVLVLTPHAAKMNKLMPFKAPPDMSKYLLSPMPGLLVKLLVEAGQEVKAGEPLAVVEAMKMENILKAERDAT VAKTHAASGDSLAVDQKIIEFAS >Mature_663_residues MFTKILIANRGEIACRVIKTAKKMGIKTVAVYSDADKDALHVSMADEAVHIGPAASAQSYLVIDKIVDACKQTGAQAVHP GYGFLSEKREFQEALGKAGIAFIGPDAHAIFAMGDKIESKKLAREAGVNTVPGYLGVIKDADEAVKIAREIGYPVMLKAS AGGGGKGMRLAWNDAEAHEGFTSATNEAKTSFGDDRVFVEKFIEQPRHIEIQVLADGQGTTLYLGERECSIQRRHQKVIE EAPSPFLTPETRKAMGEQACALARIVNYKSAGTVEFIVGGATGEFYFLEMNTRLQVEHPVTEMITGLDLVEQMIRVASGE KLSITQDDVKLNGWSMEARVYAEDPFRNFLPSTGRLTRYQPPAESAHVRVDTGVYEGGEISMFYDPMIAKLITYGPTRDA AIAHMRQALDEYYIRGLSHNIPFLASLFSKERFVKGALTTNFIAEEYANGFHANDLPADDPTVLIAVAAAANRRIHERDT RISGQFPGHEMKAGDEWVVVMSGQYHDITVRPAENGYAVALGGETVDVRTDWQIGEPLFRANVDGRAVAVQIERVGSGLR LAHAGSRVDVLVLTPHAAKMNKLMPFKAPPDMSKYLLSPMPGLLVKLLVEAGQEVKAGEPLAVVEAMKMENILKAERDAT VAKTHAASGDSLAVDQKIIEFAS
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=675, Percent_Identity=52, Blast_Score=679, Evalue=0.0, Organism=Homo sapiens, GI65506442, Length=675, Percent_Identity=52, Blast_Score=678, Evalue=0.0, Organism=Homo sapiens, GI295821183, Length=673, Percent_Identity=49.62852897474, Blast_Score=627, Evalue=1e-179, Organism=Homo sapiens, GI116805327, Length=678, Percent_Identity=41.8879056047198, Blast_Score=503, Evalue=1e-142, Organism=Homo sapiens, GI106049528, Length=447, Percent_Identity=44.2953020134228, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI106049295, Length=447, Percent_Identity=44.2953020134228, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI106049292, Length=447, Percent_Identity=44.2953020134228, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI38679974, Length=721, Percent_Identity=29.8196948682386, Blast_Score=266, Evalue=7e-71, Organism=Homo sapiens, GI38679971, Length=721, Percent_Identity=29.8196948682386, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI38679960, Length=721, Percent_Identity=29.8196948682386, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI38679977, Length=721, Percent_Identity=29.8196948682386, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI38679967, Length=721, Percent_Identity=29.8196948682386, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI134142062, Length=709, Percent_Identity=29.4781382228491, Blast_Score=242, Evalue=7e-64, Organism=Escherichia coli, GI1789654, Length=445, Percent_Identity=50.7865168539326, Blast_Score=431, Evalue=1e-121, Organism=Escherichia coli, GI1786216, Length=248, Percent_Identity=23.7903225806452, Blast_Score=63, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17567343, Length=682, Percent_Identity=50.733137829912, Blast_Score=641, Evalue=0.0, Organism=Caenorhabditis elegans, GI71987519, Length=671, Percent_Identity=42.7719821162444, Blast_Score=496, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17562816, Length=451, Percent_Identity=43.6807095343681, Blast_Score=359, Evalue=3e-99, Organism=Caenorhabditis elegans, GI71997168, Length=705, Percent_Identity=28.2269503546099, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71997163, Length=705, Percent_Identity=28.2269503546099, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI133931226, Length=677, Percent_Identity=28.8035450516987, Blast_Score=219, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6319685, Length=443, Percent_Identity=49.6613995485327, Blast_Score=432, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319695, Length=448, Percent_Identity=43.75, Blast_Score=360, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6321376, Length=448, Percent_Identity=43.75, Blast_Score=345, Evalue=9e-96, Organism=Saccharomyces cerevisiae, GI6324343, Length=738, Percent_Identity=28.9972899728997, Blast_Score=270, Evalue=7e-73, Organism=Saccharomyces cerevisiae, GI6323863, Length=673, Percent_Identity=30.1634472511144, Blast_Score=259, Evalue=1e-69, Organism=Drosophila melanogaster, GI24651757, Length=681, Percent_Identity=42.2907488986784, Blast_Score=500, Evalue=1e-141, Organism=Drosophila melanogaster, GI24651759, Length=643, Percent_Identity=40.9020217729393, Blast_Score=444, Evalue=1e-124, Organism=Drosophila melanogaster, GI24652212, Length=446, Percent_Identity=45.7399103139013, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652210, Length=446, Percent_Identity=45.7399103139013, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652214, Length=446, Percent_Identity=45.7399103139013, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI19921944, Length=446, Percent_Identity=45.7399103139013, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652216, Length=446, Percent_Identity=45.7399103139013, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI281363050, Length=446, Percent_Identity=45.7399103139013, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652224, Length=446, Percent_Identity=45.7399103139013, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652222, Length=446, Percent_Identity=45.7399103139013, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652220, Length=446, Percent_Identity=45.7399103139013, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652218, Length=446, Percent_Identity=45.7399103139013, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI161076409, Length=701, Percent_Identity=27.5320970042796, Blast_Score=240, Evalue=3e-63, Organism=Drosophila melanogaster, GI24586458, Length=701, Percent_Identity=27.5320970042796, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI161076407, Length=701, Percent_Identity=27.5320970042796, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24586460, Length=701, Percent_Identity=27.5320970042796, Blast_Score=239, Evalue=3e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 72192; Mature: 72192
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTKILIANRGEIACRVIKTAKKMGIKTVAVYSDADKDALHVSMADEAVHIGPAASAQSY CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCE LVIDKIVDACKQTGAQAVHPGYGFLSEKREFQEALGKAGIAFIGPDAHAIFAMGDKIESK EHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHH KLAREAGVNTVPGYLGVIKDADEAVKIAREIGYPVMLKASAGGGGKGMRLAWNDAEAHEG HHHHHCCCCCCCCHHHEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCHHHCC FTSATNEAKTSFGDDRVFVEKFIEQPRHIEIQVLADGQGTTLYLGERECSIQRRHQKVIE CCCCCCHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHH EAPSPFLTPETRKAMGEQACALARIVNYKSAGTVEFIVGGATGEFYFLEMNTRLQVEHPV HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCEEEECCCH TEMITGLDLVEQMIRVASGEKLSITQDDVKLNGWSMEARVYAEDPFRNFLPSTGRLTRYQ HHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCEEEEEEEEECCCHHHHCCCCCCCEECC PPAESAHVRVDTGVYEGGEISMFYDPMIAKLITYGPTRDAAIAHMRQALDEYYIRGLSHN CCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC IPFLASLFSKERFVKGALTTNFIAEEYANGFHANDLPADDPTVLIAVAAAANRRIHERDT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCHHHHCC RISGQFPGHEMKAGDEWVVVMSGQYHDITVRPAENGYAVALGGETVDVRTDWQIGEPLFR CCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEECCCEEEEEECCCCCCCHHC ANVDGRAVAVQIERVGSGLRLAHAGSRVDVLVLTPHAAKMNKLMPFKAPPDMSKYLLSPM CCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECCCHHHHHCCCCCCCCCCHHHHHHCCC PGLLVKLLVEAGQEVKAGEPLAVVEAMKMENILKAERDATVAKTHAASGDSLAVDQKIIE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHCCCCCCCCHHHHHHHH FAS HCC >Mature Secondary Structure MFTKILIANRGEIACRVIKTAKKMGIKTVAVYSDADKDALHVSMADEAVHIGPAASAQSY CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCE LVIDKIVDACKQTGAQAVHPGYGFLSEKREFQEALGKAGIAFIGPDAHAIFAMGDKIESK EHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHH KLAREAGVNTVPGYLGVIKDADEAVKIAREIGYPVMLKASAGGGGKGMRLAWNDAEAHEG HHHHHCCCCCCCCHHHEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCHHHCC FTSATNEAKTSFGDDRVFVEKFIEQPRHIEIQVLADGQGTTLYLGERECSIQRRHQKVIE CCCCCCHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHH EAPSPFLTPETRKAMGEQACALARIVNYKSAGTVEFIVGGATGEFYFLEMNTRLQVEHPV HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCEEEECCCH TEMITGLDLVEQMIRVASGEKLSITQDDVKLNGWSMEARVYAEDPFRNFLPSTGRLTRYQ HHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCEEEEEEEEECCCHHHHCCCCCCCEECC PPAESAHVRVDTGVYEGGEISMFYDPMIAKLITYGPTRDAAIAHMRQALDEYYIRGLSHN CCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC IPFLASLFSKERFVKGALTTNFIAEEYANGFHANDLPADDPTVLIAVAAAANRRIHERDT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCHHHHCC RISGQFPGHEMKAGDEWVVVMSGQYHDITVRPAENGYAVALGGETVDVRTDWQIGEPLFR CCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEECCCEEEEEECCCCCCCHHC ANVDGRAVAVQIERVGSGLRLAHAGSRVDVLVLTPHAAKMNKLMPFKAPPDMSKYLLSPM CCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECCCHHHHHCCCCCCCCCCHHHHHHCCC PGLLVKLLVEAGQEVKAGEPLAVVEAMKMENILKAERDATVAKTHAASGDSLAVDQKIIE HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHCCCCCCCCHHHHHHHH FAS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]