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The map label for this gene is tsr [C]

Identifier: 83313000

GI number: 83313000

Start: 4315770

End: 4317458

Strand: Reverse

Name: tsr [C]

Synonym: amb3901

Alternate gene names: 83313000

Gene position: 4317458-4315770 (Counterclockwise)

Preceding gene: 83313001

Following gene: 83312996

Centisome position: 86.92

GC content: 67.14

Gene sequence:

>1689_bases
ATGAGTTTTCATTGGACGATCACCCGCAAGCTTCAGGCCATGACTGTCCTGATGCTGCTGCTCCTGACCGCCACCAGCGG
CTTCGGTATCCTGGGTATGAGCCGCATGCACGACGGCTTTCGGGCGGTGACGGAAGATACGACCCCGGCGTTGATCCATC
TTTCGGGAACCGTGGATGCCCTGCACCGCATCCGCGTCCGCGTGATCGGCGCGGCTATGGAAACCGATTCCGCCCGCATT
GCGGCGCTGCGCGATGAATACGTCAAGCAGCTCGCCGATCTGAACAAGACCTGGAATGCGTATGCCGCCAGCCGCCTGTC
GCCGGAGGAAGCCGCCCTGGCCCGGGAGGCAGAGACCGGCATCAAGAGCTACCAGGGCTTTATACAGGAGAGTTGGGCGC
GCATCGCCGCCGGCGAAGCCAACGGCGTCCTTGCCGATCTGGTGGGCGGCAAGGGGGTGGATAAATTCCGTGAGGCGGCC
ACCCCCTTGCGCAAATTGCTGGATTTCCAGAGCCGGGAAGCCGCCACCATGTTCGCCGAGGGCGAGCAGAACTACGACCG
CGATCGGAGCGCCAGTCTTGGCCTGGTCGGACTTGGTCTGGTTCTCGGCTTCGCCCTGTCGGCGCTGATCGGCCGCTCGG
TGGCCCGGCCCATTCACCGCATCATCGCGGTCATGGGGCGTCTGGCCGCCAATGACACCCAGGTGGAGGTGACCGGGCAG
GATCGCGGCGACGAGGTTGGGGAAATCGCCCGCGCCGTCCAGGTGTTCAAGCTCAATGCGCTGGAAAAAGGCCGGCTGGA
GGCGGAGGCGCAGGAGAACAAGCGTCTGGCCGAAAGTCGGCATCATCAGGAAATGAAGTCCCTGGCCGCTGACTTCGAAA
GCGGCGTTTCGGTCGTGGTGGACAAGGTGGCCGGGGCCTCGGCCGAGATGGAGCACACGGCCCAGGCGCTGTCCACTCTG
TCCGAGCAGGTCGCCGTCCGGGCGGAAGAGGTGGCCGGCGCCTCGGAGCATGCCGCCGCCAATGTGGAGACCGTTGCCGC
CGCCACCGAGGAATTGGCGGCTTCGGTCGCCGAGATCGGCCGGCAGGTCTCGGAATCCGCCCGCGTCGCCCGCGACGCCG
TGGACGAGGCGGCCCAGGCCAACACCATCGTTCACGGCCTGTCCGAGGCCACCAAGCGGATCGGCGAAGTGGTCACCATG
ATCACCGATATTGCCGCCCAGACCAACCTGCTGGCGCTGAATGCCACCATCGAGGCGGCCCGGGCGGGCGAGGCGGGCAA
GGGCTTCGCCGTGGTGGCGGGCGAAGTGAAGAACCTGGCCAATCAGACGGCGCGGGCCACCGACGAGATCTCGCAGCAGA
TCGCTTCGGTGCAGGCTGAGACGGGGCGGGCGGTGGATGCCATCCGTGGGGTCGGAACCACCATCGGCCGGATCGACGAG
ATTTCCGCCGCCATTGCCTCGGCGGTGGAGGAGCAGGGCGCGGCCACGCGGGAAATCGCCCGCAACGTGGAGGAGGCGGC
CCAGGGCACCCAATCGGTGTCGGGCAATATCGCCGGCGTCACCTCGGCGGCGCGCGATACCGGTCAGGCCTCGGCCACGG
TCCTGGCCTCTGCCACCGAACTGGCGGCCGAGGCGCATACCCTGCGCCGGATCGTGCAGGATTTCGTGGCCAAGGTCCGG
GCCAGCTAG

Upstream 100 bases:

>100_bases
TTATACACCACTATTATTATAGGTATGGAGATGTGGCGCCCAGCTATGATAGGGCTGGTTCGGGTGCTGCAGTCCAAAAG
AAGTATATCAAAGGTGAGCC

Downstream 100 bases:

>100_bases
GACACTGAGCGTCAAATGTGGGGCGCGTCGTCATCCTGAGCGCCGCGACGGTGCAGGTTTAAGGCCTTTGATCCGGGCCA
GGCGGGGCTGCCGCCCCGAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSFHWTITRKLQAMTVLMLLLLTATSGFGILGMSRMHDGFRAVTEDTTPALIHLSGTVDALHRIRVRVIGAAMETDSARI
AALRDEYVKQLADLNKTWNAYAASRLSPEEAALAREAETGIKSYQGFIQESWARIAAGEANGVLADLVGGKGVDKFREAA
TPLRKLLDFQSREAATMFAEGEQNYDRDRSASLGLVGLGLVLGFALSALIGRSVARPIHRIIAVMGRLAANDTQVEVTGQ
DRGDEVGEIARAVQVFKLNALEKGRLEAEAQENKRLAESRHHQEMKSLAADFESGVSVVVDKVAGASAEMEHTAQALSTL
SEQVAVRAEEVAGASEHAAANVETVAAATEELAASVAEIGRQVSESARVARDAVDEAAQANTIVHGLSEATKRIGEVVTM
ITDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTARATDEISQQIASVQAETGRAVDAIRGVGTTIGRIDE
ISAAIASAVEEQGAATREIARNVEEAAQGTQSVSGNIAGVTSAARDTGQASATVLASATELAAEAHTLRRIVQDFVAKVR
AS

Sequences:

>Translated_562_residues
MSFHWTITRKLQAMTVLMLLLLTATSGFGILGMSRMHDGFRAVTEDTTPALIHLSGTVDALHRIRVRVIGAAMETDSARI
AALRDEYVKQLADLNKTWNAYAASRLSPEEAALAREAETGIKSYQGFIQESWARIAAGEANGVLADLVGGKGVDKFREAA
TPLRKLLDFQSREAATMFAEGEQNYDRDRSASLGLVGLGLVLGFALSALIGRSVARPIHRIIAVMGRLAANDTQVEVTGQ
DRGDEVGEIARAVQVFKLNALEKGRLEAEAQENKRLAESRHHQEMKSLAADFESGVSVVVDKVAGASAEMEHTAQALSTL
SEQVAVRAEEVAGASEHAAANVETVAAATEELAASVAEIGRQVSESARVARDAVDEAAQANTIVHGLSEATKRIGEVVTM
ITDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTARATDEISQQIASVQAETGRAVDAIRGVGTTIGRIDE
ISAAIASAVEEQGAATREIARNVEEAAQGTQSVSGNIAGVTSAARDTGQASATVLASATELAAEAHTLRRIVQDFVAKVR
AS
>Mature_561_residues
SFHWTITRKLQAMTVLMLLLLTATSGFGILGMSRMHDGFRAVTEDTTPALIHLSGTVDALHRIRVRVIGAAMETDSARIA
ALRDEYVKQLADLNKTWNAYAASRLSPEEAALAREAETGIKSYQGFIQESWARIAAGEANGVLADLVGGKGVDKFREAAT
PLRKLLDFQSREAATMFAEGEQNYDRDRSASLGLVGLGLVLGFALSALIGRSVARPIHRIIAVMGRLAANDTQVEVTGQD
RGDEVGEIARAVQVFKLNALEKGRLEAEAQENKRLAESRHHQEMKSLAADFESGVSVVVDKVAGASAEMEHTAQALSTLS
EQVAVRAEEVAGASEHAAANVETVAAATEELAASVAEIGRQVSESARVARDAVDEAAQANTIVHGLSEATKRIGEVVTMI
TDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTARATDEISQQIASVQAETGRAVDAIRGVGTTIGRIDEI
SAAIASAVEEQGAATREIARNVEEAAQGTQSVSGNIAGVTSAARDTGQASATVLASATELAAEAHTLRRIVQDFVAKVRA
S

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=549, Percent_Identity=26.775956284153, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788195, Length=205, Percent_Identity=33.6585365853659, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788194, Length=196, Percent_Identity=35.7142857142857, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1787690, Length=469, Percent_Identity=24.9466950959488, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=216, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59119; Mature: 58988

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFHWTITRKLQAMTVLMLLLLTATSGFGILGMSRMHDGFRAVTEDTTPALIHLSGTVDA
CCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
LHRIRVRVIGAAMETDSARIAALRDEYVKQLADLNKTWNAYAASRLSPEEAALAREAETG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH
IKSYQGFIQESWARIAAGEANGVLADLVGGKGVDKFREAATPLRKLLDFQSREAATMFAE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GEQNYDRDRSASLGLVGLGLVLGFALSALIGRSVARPIHRIIAVMGRLAANDTQVEVTGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
DRGDEVGEIARAVQVFKLNALEKGRLEAEAQENKRLAESRHHQEMKSLAADFESGVSVVV
CCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DKVAGASAEMEHTAQALSTLSEQVAVRAEEVAGASEHAAANVETVAAATEELAASVAEIG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
RQVSESARVARDAVDEAAQANTIVHGLSEATKRIGEVVTMITDIAAQTNLLALNATIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHH
RAGEAGKGFAVVAGEVKNLANQTARATDEISQQIASVQAETGRAVDAIRGVGTTIGRIDE
HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
ISAAIASAVEEQGAATREIARNVEEAAQGTQSVSGNIAGVTSAARDTGQASATVLASATE
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH
LAAEAHTLRRIVQDFVAKVRAS
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFHWTITRKLQAMTVLMLLLLTATSGFGILGMSRMHDGFRAVTEDTTPALIHLSGTVDA
CEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
LHRIRVRVIGAAMETDSARIAALRDEYVKQLADLNKTWNAYAASRLSPEEAALAREAETG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH
IKSYQGFIQESWARIAAGEANGVLADLVGGKGVDKFREAATPLRKLLDFQSREAATMFAE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GEQNYDRDRSASLGLVGLGLVLGFALSALIGRSVARPIHRIIAVMGRLAANDTQVEVTGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
DRGDEVGEIARAVQVFKLNALEKGRLEAEAQENKRLAESRHHQEMKSLAADFESGVSVVV
CCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DKVAGASAEMEHTAQALSTLSEQVAVRAEEVAGASEHAAANVETVAAATEELAASVAEIG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
RQVSESARVARDAVDEAAQANTIVHGLSEATKRIGEVVTMITDIAAQTNLLALNATIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHH
RAGEAGKGFAVVAGEVKNLANQTARATDEISQQIASVQAETGRAVDAIRGVGTTIGRIDE
HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH
ISAAIASAVEEQGAATREIARNVEEAAQGTQSVSGNIAGVTSAARDTGQASATVLASATE
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH
LAAEAHTLRRIVQDFVAKVRAS
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]