| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312583
Identifier: 83312583
GI number: 83312583
Start: 3830219
End: 3831373
Strand: Reverse
Name: 83312583
Synonym: amb3484
Alternate gene names: NA
Gene position: 3831373-3830219 (Counterclockwise)
Preceding gene: 83312584
Following gene: 83312582
Centisome position: 77.13
GC content: 67.36
Gene sequence:
>1155_bases ATGATGTTCGTCTGGCAGGGCCTCTGTTTGGTCCTGATCGCATTGACGGTGGCGGGCTGCCTGTTCCAGGTGGCTTCGGC CGCGCTGGTCCGGCGCTTCCGGCGGGCACCGGAGCCGGTTCCCGCCGCCCGGCCGCCCATTTCGGTGATGAAGCCCCTGT GCGGCGCCGAGCACGGCATGGCCGCCAATCTGGACTCCTGCCTGCGCCAGGACTATCCCCGGTTTCAGTTGGTATTCGGC GTCGCCGACCCCGCCGATCCAGCCCTGGACGTGGTCAAGGCGCTGCCCGGCGACGTGGAGGGGGCCGAAATCGACTGGGT GGCCGATTCCGCCCGCCACGGCCACAATCTCAAGGTGGGCAACCTCCTCAACATGTGGCCCAAGGTGCGCCACGACGTGA TCGCCATCGCCGACAGCGATATCCGGGTGGGACCCCATTATCTGGACGATCTGGCCGCGCCCTTTGACGACCCCAAGGTG GGAATCGTCACCTGTCTTTACGTCGGGCGGCCCGAGCCCGACCTGTGGAGTTCCCTGGGCGCCATGGGCATCAACCATGG CTTTTTGCCCGGCGCGGTGCTGGCCCGCGCCATCGGCCGCAAGGACGGTTGTTTCGGCGCCACCATGGCTGTGCGCCGCG AGGTGCTGGAAAAGGGCGGCGGCCTCGCGGCCCTCTCCCAGGTGCTGGCCGATGATTGGGTGCTGGGGCGCATGGTGCGC GACCAGGGGCTCGAGATCGTCCTGGCGGCGCGGCCGGTGGACATGAACGTCCACGAGCCTTCGCTCAAAACTTTGCTCGA TCATGAAATTCGCTGGGGCCGGACCATTGCGGCGGTGGACCGGACTTCCTACATGGCTTCGGTGATCACCCAGCCGGTGG CTCTTGCGGCGCTGGCGGTGCTGGCGGGCGGCGCGTGGTGGCCGTCCGTGGCGGCGCTGGCGTTGGCGGTGCTTTGCCGG TTGTGGGCGGTTCGGGTCGAGGAGCGGGCGCTGGGGCTTCCCCGGTGCGGTCTCGGTCTGCTGGGCATGAGGGAAATTCT GTCGTTCGTCGTCTATGTTGTCGCATGTTGCGGACGGACTGTGGTATGGCGTGGCCGGCGATTCGCCGTCCGTGCCGACG GCACACTCGATCAGGTTGAAGGCAGTCAGACATGA
Upstream 100 bases:
>100_bases GTGCGGCGCTCGGAATTCGGGTCCATCTTCCGGTCCAAGGGCCTGGACGGGCTGATCGAGACCCTGGAGAAGCAGACCGC GGCATTGGACAAGTAACGCC
Downstream 100 bases:
>100_bases AGAAGTCGCTTTTCCTCAATCCGCCCTCGTTCGAAGGTTATGACGGCGGGGCCGGTGCCCGTTTCCAGGCGAAGCGCGAG ATCAAGTCCAACTGGTATCC
Product: cell wall biosynthesis glycosyltransferase
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGMAANLDSCLRQDYPRFQLVFG VADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVGNLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKV GIVTCLYVGRPEPDLWSSLGAMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAVLAGGAWWPSVAALALAVLCR LWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRTVVWRGRRFAVRADGTLDQVEGSQT
Sequences:
>Translated_384_residues MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGMAANLDSCLRQDYPRFQLVFG VADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVGNLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKV GIVTCLYVGRPEPDLWSSLGAMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAVLAGGAWWPSVAALALAVLCR LWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRTVVWRGRRFAVRADGTLDQVEGSQT >Mature_384_residues MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGMAANLDSCLRQDYPRFQLVFG VADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVGNLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKV GIVTCLYVGRPEPDLWSSLGAMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAVLAGGAWWPSVAALALAVLCR LWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRTVVWRGRRFAVRADGTLDQVEGSQT
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=364, Percent_Identity=24.7252747252747, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI32566973, Length=390, Percent_Identity=20.7692307692308, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564728, Length=270, Percent_Identity=21.8518518518519, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25149574, Length=270, Percent_Identity=21.8518518518519, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25149577, Length=270, Percent_Identity=21.8518518518519, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25149580, Length=270, Percent_Identity=21.8518518518519, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24657569, Length=355, Percent_Identity=22.2535211267606, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 41369; Mature: 41369
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC AANLDSCLRQDYPRFQLVFGVADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVG CCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC NLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKVGIVTCLYVGRPEPDLWSSLG HHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHH AMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR HHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAV HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAGGAWWPSVAALALAVLCRLWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRT HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC VVWRGRRFAVRADGTLDQVEGSQT EEECCCEEEEECCCCHHHCCCCCC >Mature Secondary Structure MMFVWQGLCLVLIALTVAGCLFQVASAALVRRFRRAPEPVPAARPPISVMKPLCGAEHGM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC AANLDSCLRQDYPRFQLVFGVADPADPALDVVKALPGDVEGAEIDWVADSARHGHNLKVG CCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC NLLNMWPKVRHDVIAIADSDIRVGPHYLDDLAAPFDDPKVGIVTCLYVGRPEPDLWSSLG HHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHH AMGINHGFLPGAVLARAIGRKDGCFGATMAVRREVLEKGGGLAALSQVLADDWVLGRMVR HHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DQGLEIVLAARPVDMNVHEPSLKTLLDHEIRWGRTIAAVDRTSYMASVITQPVALAALAV HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAGGAWWPSVAALALAVLCRLWAVRVEERALGLPRCGLGLLGMREILSFVVYVVACCGRT HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC VVWRGRRFAVRADGTLDQVEGSQT EEECCCEEEEECCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA