| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is kefB [H]
Identifier: 83312565
GI number: 83312565
Start: 3805718
End: 3807439
Strand: Reverse
Name: kefB [H]
Synonym: amb3466
Alternate gene names: 83312565
Gene position: 3807439-3805718 (Counterclockwise)
Preceding gene: 83312566
Following gene: 83312559
Centisome position: 76.65
GC content: 70.56
Gene sequence:
>1722_bases TTGCCGCTATACTCCCCGGGACCAATGGGGAGTGATCGCGTGCACGGGTCCGAAGCGCTGTTCGATGTCTTGTCGCTGCT GCTGGCGGCGGTGGTGCTGGTGCCGCTGTTCCAGCGGTTCGGCATCCCCTCGGTGCTGGCCTATCTGGCGGCGGGCGTGG CGCTGGGTCCCTATACCCCCGGCCCGGTGGTCGACCTGGAGGTCACCCGGCCGCTGGCCGAATTCGGGGTGGTGTTCCTG CTGTTCGCCATCGGCATGGAATTGCCGCTGTCGCGTCTTCGGACCATGCGCCGCTATATCCTGGGGCTGGGCCTGGCCCA GGTGGTGGTCACCGCCCTGGCCATCGGCGGCATCAGCCATGCCCTCGGCCTGGGCAGCAGTGCCGCCCTGATCATCGGGC TGACCCTGGCGTTCTCCTCCACCGCCACGGTGCTGGCCATCCTGGTGGAGCGCGGCGAGGCGGTGGACCATCACGGCCGC ATCGCCGTGGCCGTGCTGATCTTCCAGGATCTGGCGGTGGTGCCGGTGCTGGTGCTGCTGCCCCTGCTGGCGGGGCAGGA GCGGCACATGGCCGAGGCCCTGGCCCTGGCCGGGGGCAAGGTGGCGCTGGTCATGGCCGCCATCTTCGTGGTCGGGCGCT TCCTGCTGCGTCCCGTCTACCGGTTCATCGCCACTGCCCGCAATCCCGAGGTGTTTACCGCCGCCAACCTGCTGTTGGTC CTGGCCGTGGCCTGGGTGACCGGCGAGGCCGGCATGTCCATGGCCCTGGGCGCCTTCCTGGCCGGGCTGCTGCTGGCCGA TTCCCGCTATCGCCATCAGGTGGAAGCCGATATCGAGCCGTTTCGCGGCCTGCTGCTGGGCCTGTTCTTCATGACCGTGG GCATGTCCATCAACCTGCCCCTGGTGGCCGACCGGCTTGGGCTGGTCCTTGGCCTGACCCTGGGCACGGTGGCTGTCAAG GCGGTGGTGCTGATCGGCCTGTGCCGTCTGATGAAGGTGGGGCTGGCCGACGGACTGCGGGTGGGGTTCCTGCTGGCCCA GGGCGGCGAGTTCGCGTTCGTGGTGTTCGGCCGTGCCCTCGAACTGAAGCTTCTCGACGGCGGGCTGGGCCAGTCCCTGC TGGCCAGCGTGGCCCTGTCCATGTTGCTGACCCCCGCCCTGGCGGCGCTGGGGCGGCGCTGGTCCCAGGGACTGGCGCCG CAAGCCAGCGGCGAACCGATCCCCGAGACGGCGCGCCATCTGGCCGACCATGTGATCATCGCCGGCTATGGCCGGGTGGG CCGCGCCATCGGCAGGCTGCTGGCCGAGCACGGCATTTCCTTCATCGCCCTCGACATGGATGTGGACCGGGTGGCCAAGG CGCGCGAGGACGGCATTCCCGTCTATTACGGCGATGCCGGCCGCACCGGCATCCTGCGCTCGGTGGGCATCGACCGGGCG CGGGCGGCGGTGATCACCGTCAACGAGGCCCGCCAGGCCGAGCGCGCCATCGGGTGCATCCGGCAGGCGGCGCCCCATCT GCCCATCGTGGCCCGGGCCCGCGACCGCGCCCAGGAACAGCTTCTGGGCGATATCGGCGCCACCGCCGTCATTCCCGAGA CGGTGGAGGCCAGCCTGCAGATGGCCGGCGCGGTGCTGCGCTCGGCGGGAATCGACGAGGACGCGGTGGAGCGCAGCCTG AAGGGCTATCGCCGCCGGCGCTATGGCCGGGCGACGGAGTGA
Upstream 100 bases:
>100_bases GCCCATTCCCTGGCGGACCGGGCCCAGTCGCTGCGGGCGGCGGTCACCGGCTTCCTGGTGGACGCCAAGACCGTCTGACA GCGGTTCGACACGGGCGTTC
Downstream 100 bases:
>100_bases GGTCGGCGGGCTCTTGCGGGGCTCTCGCCCCGGACCCCGGTTGGAGGTGAACCTCCAAACCTCCCTTCCTTCTCTTCATA AGACATAAAGGGGGGCCGGG
Product: glutathione-regulated potassium-efflux system protein kefB
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MPLYSPGPMGSDRVHGSEALFDVLSLLLAAVVLVPLFQRFGIPSVLAYLAAGVALGPYTPGPVVDLEVTRPLAEFGVVFL LFAIGMELPLSRLRTMRRYILGLGLAQVVVTALAIGGISHALGLGSSAALIIGLTLAFSSTATVLAILVERGEAVDHHGR IAVAVLIFQDLAVVPVLVLLPLLAGQERHMAEALALAGGKVALVMAAIFVVGRFLLRPVYRFIATARNPEVFTAANLLLV LAVAWVTGEAGMSMALGAFLAGLLLADSRYRHQVEADIEPFRGLLLGLFFMTVGMSINLPLVADRLGLVLGLTLGTVAVK AVVLIGLCRLMKVGLADGLRVGFLLAQGGEFAFVVFGRALELKLLDGGLGQSLLASVALSMLLTPALAALGRRWSQGLAP QASGEPIPETARHLADHVIIAGYGRVGRAIGRLLAEHGISFIALDMDVDRVAKAREDGIPVYYGDAGRTGILRSVGIDRA RAAVITVNEARQAERAIGCIRQAAPHLPIVARARDRAQEQLLGDIGATAVIPETVEASLQMAGAVLRSAGIDEDAVERSL KGYRRRRYGRATE
Sequences:
>Translated_573_residues MPLYSPGPMGSDRVHGSEALFDVLSLLLAAVVLVPLFQRFGIPSVLAYLAAGVALGPYTPGPVVDLEVTRPLAEFGVVFL LFAIGMELPLSRLRTMRRYILGLGLAQVVVTALAIGGISHALGLGSSAALIIGLTLAFSSTATVLAILVERGEAVDHHGR IAVAVLIFQDLAVVPVLVLLPLLAGQERHMAEALALAGGKVALVMAAIFVVGRFLLRPVYRFIATARNPEVFTAANLLLV LAVAWVTGEAGMSMALGAFLAGLLLADSRYRHQVEADIEPFRGLLLGLFFMTVGMSINLPLVADRLGLVLGLTLGTVAVK AVVLIGLCRLMKVGLADGLRVGFLLAQGGEFAFVVFGRALELKLLDGGLGQSLLASVALSMLLTPALAALGRRWSQGLAP QASGEPIPETARHLADHVIIAGYGRVGRAIGRLLAEHGISFIALDMDVDRVAKAREDGIPVYYGDAGRTGILRSVGIDRA RAAVITVNEARQAERAIGCIRQAAPHLPIVARARDRAQEQLLGDIGATAVIPETVEASLQMAGAVLRSAGIDEDAVERSL KGYRRRRYGRATE >Mature_572_residues PLYSPGPMGSDRVHGSEALFDVLSLLLAAVVLVPLFQRFGIPSVLAYLAAGVALGPYTPGPVVDLEVTRPLAEFGVVFLL FAIGMELPLSRLRTMRRYILGLGLAQVVVTALAIGGISHALGLGSSAALIIGLTLAFSSTATVLAILVERGEAVDHHGRI AVAVLIFQDLAVVPVLVLLPLLAGQERHMAEALALAGGKVALVMAAIFVVGRFLLRPVYRFIATARNPEVFTAANLLLVL AVAWVTGEAGMSMALGAFLAGLLLADSRYRHQVEADIEPFRGLLLGLFFMTVGMSINLPLVADRLGLVLGLTLGTVAVKA VVLIGLCRLMKVGLADGLRVGFLLAQGGEFAFVVFGRALELKLLDGGLGQSLLASVALSMLLTPALAALGRRWSQGLAPQ ASGEPIPETARHLADHVIIAGYGRVGRAIGRLLAEHGISFIALDMDVDRVAKAREDGIPVYYGDAGRTGILRSVGIDRAR AAVITVNEARQAERAIGCIRQAAPHLPIVARARDRAQEQLLGDIGATAVIPETVEASLQMAGAVLRSAGIDEDAVERSLK GYRRRRYGRATE
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=348, Percent_Identity=26.7241379310345, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1789749, Length=555, Percent_Identity=41.0810810810811, Blast_Score=348, Evalue=4e-97, Organism=Escherichia coli, GI1786232, Length=552, Percent_Identity=39.1304347826087, Blast_Score=320, Evalue=2e-88, Organism=Escherichia coli, GI1786685, Length=533, Percent_Identity=30.5816135084428, Blast_Score=180, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 60387; Mature: 60256
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLYSPGPMGSDRVHGSEALFDVLSLLLAAVVLVPLFQRFGIPSVLAYLAAGVALGPYTP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GPVVDLEVTRPLAEFGVVFLLFAIGMELPLSRLRTMRRYILGLGLAQVVVTALAIGGISH CCEEEEEHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLGSSAALIIGLTLAFSSTATVLAILVERGEAVDHHGRIAVAVLIFQDLAVVPVLVLL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PLLAGQERHMAEALALAGGKVALVMAAIFVVGRFLLRPVYRFIATARNPEVFTAANLLLV HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAVAWVTGEAGMSMALGAFLAGLLLADSRYRHQVEADIEPFRGLLLGLFFMTVGMSINLP HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC LVADRLGLVLGLTLGTVAVKAVVLIGLCRLMKVGLADGLRVGFLLAQGGEFAFVVFGRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEECCEE ELKLLDGGLGQSLLASVALSMLLTPALAALGRRWSQGLAPQASGEPIPETARHLADHVII EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEE AGYGRVGRAIGRLLAEHGISFIALDMDVDRVAKAREDGIPVYYGDAGRTGILRSVGIDRA ECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCHH RAAVITVNEARQAERAIGCIRQAAPHLPIVARARDRAQEQLLGDIGATAVIPETVEASLQ HEEEEEEHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH MAGAVLRSAGIDEDAVERSLKGYRRRRYGRATE HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PLYSPGPMGSDRVHGSEALFDVLSLLLAAVVLVPLFQRFGIPSVLAYLAAGVALGPYTP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GPVVDLEVTRPLAEFGVVFLLFAIGMELPLSRLRTMRRYILGLGLAQVVVTALAIGGISH CCEEEEEHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLGSSAALIIGLTLAFSSTATVLAILVERGEAVDHHGRIAVAVLIFQDLAVVPVLVLL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PLLAGQERHMAEALALAGGKVALVMAAIFVVGRFLLRPVYRFIATARNPEVFTAANLLLV HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAVAWVTGEAGMSMALGAFLAGLLLADSRYRHQVEADIEPFRGLLLGLFFMTVGMSINLP HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC LVADRLGLVLGLTLGTVAVKAVVLIGLCRLMKVGLADGLRVGFLLAQGGEFAFVVFGRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEECCEE ELKLLDGGLGQSLLASVALSMLLTPALAALGRRWSQGLAPQASGEPIPETARHLADHVII EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEE AGYGRVGRAIGRLLAEHGISFIALDMDVDRVAKAREDGIPVYYGDAGRTGILRSVGIDRA ECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCHH RAAVITVNEARQAERAIGCIRQAAPHLPIVARARDRAQEQLLGDIGATAVIPETVEASLQ HEEEEEEHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH MAGAVLRSAGIDEDAVERSLKGYRRRRYGRATE HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA