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The map label for this gene is ttdB [H]

Identifier: 83312277

GI number: 83312277

Start: 3440793

End: 3441401

Strand: Reverse

Name: ttdB [H]

Synonym: amb3178

Alternate gene names: 83312277

Gene position: 3441401-3440793 (Counterclockwise)

Preceding gene: 83312278

Following gene: 83312276

Centisome position: 69.28

GC content: 59.28

Gene sequence:

>609_bases
GTGAAGAAGATCCTGACGACCCCCATCAAGGACGAAGACCTGGCGGACCTCAATGTCGGCGACATCGTCTACCTGACCGG
CCGTCTGGTCACTTGCCGCGACGTGGCCCACCGCCGCCTGATTGAACAAAAGCGCCAGCTTCCCGTGGACCTCAAGGGCG
GGGCCATCTTCCATGCCGGCCCCATCGTGCGGAAGACCGATGAGGGTGACTTCGAAATGGTCTCCATCGGCCCCACCACT
TCCATGCGGATGGAGAAGTTCGAGAAGCAGTTCATCAAGGAAACCGGGGTCAAGCTGATCATCGGCAAGGGCGGCATGGG
GCCGGAGACGGTTGCGGGCTGCGCCGAGGACAAGGCAGTCCATGCGGTGTTCCCAGGTGGCTGCGCCGTCCTCGCCGCCA
CCAAGGTCGAGCGAATTGAAGGCGCCGAATGGCAGGATCTGGGTATGCCGGAGACCATGTGGGTCAACAAGGTCAATGAA
TTCGGCCCGCTGATCATCTCCATCGACACCAAGGGCAATAATCTGTTCGAACAGAACAAGGCCCGCTTCAATGAGAAGAA
AGGTCCAATTCTTGAGCGGATCAAAAGCCAAGTGGGCTTCATTCGCTAG

Upstream 100 bases:

>100_bases
GCGTGGCAGTCTCGACCGGCTGCTGGGCTCATCGCCGTGGGCGTATCCGCTTCAATGCGGACCTGTCCTACGAAATCGTC
TCGCATGAAGGAGTGGTGCT

Downstream 100 bases:

>100_bases
CTGGTGATTTCTTGCCGCCGACAGAGCAAAGGCACACCCCGATGAGATCTATCTCGTCGGGGTGTTTTCATGTTCTGCCG
ACCACGAACCGCTCATTATA

Product: L(+)-tartrate dehydratase subunit beta

Products: NA

Alternate protein names: L-TTD beta [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKKILTTPIKDEDLADLNVGDIVYLTGRLVTCRDVAHRRLIEQKRQLPVDLKGGAIFHAGPIVRKTDEGDFEMVSIGPTT
SMRMEKFEKQFIKETGVKLIIGKGGMGPETVAGCAEDKAVHAVFPGGCAVLAATKVERIEGAEWQDLGMPETMWVNKVNE
FGPLIISIDTKGNNLFEQNKARFNEKKGPILERIKSQVGFIR

Sequences:

>Translated_202_residues
MKKILTTPIKDEDLADLNVGDIVYLTGRLVTCRDVAHRRLIEQKRQLPVDLKGGAIFHAGPIVRKTDEGDFEMVSIGPTT
SMRMEKFEKQFIKETGVKLIIGKGGMGPETVAGCAEDKAVHAVFPGGCAVLAATKVERIEGAEWQDLGMPETMWVNKVNE
FGPLIISIDTKGNNLFEQNKARFNEKKGPILERIKSQVGFIR
>Mature_202_residues
MKKILTTPIKDEDLADLNVGDIVYLTGRLVTCRDVAHRRLIEQKRQLPVDLKGGAIFHAGPIVRKTDEGDFEMVSIGPTT
SMRMEKFEKQFIKETGVKLIIGKGGMGPETVAGCAEDKAVHAVFPGGCAVLAATKVERIEGAEWQDLGMPETMWVNKVNE
FGPLIISIDTKGNNLFEQNKARFNEKKGPILERIKSQVGFIR

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789443, Length=203, Percent_Identity=66.5024630541872, Blast_Score=281, Evalue=1e-77,
Organism=Escherichia coli, GI1787897, Length=180, Percent_Identity=32.7777777777778, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790564, Length=180, Percent_Identity=31.6666666666667, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004647 [H]

Pfam domain/function: PF05683 Fumerase_C [H]

EC number: =4.2.1.32 [H]

Molecular weight: Translated: 22351; Mature: 22351

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILTTPIKDEDLADLNVGDIVYLTGRLVTCRDVAHRRLIEQKRQLPVDLKGGAIFHAG
CCCCCCCCCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHCCCCEECCCEEEECC
PIVRKTDEGDFEMVSIGPTTSMRMEKFEKQFIKETGVKLIIGKGGMGPETVAGCAEDKAV
CCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCEE
HAVFPGGCAVLAATKVERIEGAEWQDLGMPETMWVNKVNEFGPLIISIDTKGNNLFEQNK
EEECCCCEEEHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHH
ARFNEKKGPILERIKSQVGFIR
HHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKILTTPIKDEDLADLNVGDIVYLTGRLVTCRDVAHRRLIEQKRQLPVDLKGGAIFHAG
CCCCCCCCCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHCCCCEECCCEEEECC
PIVRKTDEGDFEMVSIGPTTSMRMEKFEKQFIKETGVKLIIGKGGMGPETVAGCAEDKAV
CCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCEE
HAVFPGGCAVLAATKVERIEGAEWQDLGMPETMWVNKVNEFGPLIISIDTKGNNLFEQNK
EEECCCCEEEHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHH
ARFNEKKGPILERIKSQVGFIR
HHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]