Click here to switch to the map view.

The map label for this gene is ttuB [H]

Identifier: 83312276

GI number: 83312276

Start: 3439261

End: 3440574

Strand: Reverse

Name: ttuB [H]

Synonym: amb3177

Alternate gene names: 83312276

Gene position: 3440574-3439261 (Counterclockwise)

Preceding gene: 83312277

Following gene: 83312275

Centisome position: 69.27

GC content: 60.12

Gene sequence:

>1314_bases
ATGAATACGGATATGGAAAAGCGTGTCCTGCGCAGAATCAGCTGGCGCATTGTCCCATTTATCATGCTCTTGTATTTTAT
TGCGTATATCGATCGGGTGAACATCGGCTTCGCCTCGCTGACCATGAACAAAGACCTTGGCTTCACTTCGTCAGTGTTTG
GATTTGGTGCGGGCATCTTCTTCTTCGGCTATTTCCTGTTCGAGGTCCCCTCCAATCTGATCCTTGAAAAAGTGGGAGCG
CGTCTTTGGATCACCCGAGTGATGATCACCTGGGGCTTGATCTCCGGCGCAATGGCTTTCGTGCAAGGGAGCACCAGCTT
CTACGTCCTGCGCTTCCTGCTCGGAGCCGCCGAGGCTGGCTTCTTTCCTGGTATCATCCTCTATCTCAGCTATTGGTTCC
CGGCGCGCCATCGTGCTGGCGTAACCGCGCTCTTCATGGCGGCCGCCCCGATCTCGACGGCCCTGGGCTCTCCCATTTCC
GCCGCATTGCTTGAACTGCATGGCGTCATGGGGCTGGCCGGCTGGCAATGGATGTTCATCATCGAAGCCCTTCCCGCCCT
GATCCTTGGCGTCGTCGTGTTCTTCTACATGACCGACCGCCCGGAAAAGGCCACTTGGATGCCCGAAGACGAACGCGCCT
GGCTGATCAATGCCATGAACGAGGAAGCGGCCAGCAAGTCTGGGCATGCCAAGCACAGCATCTGGCGCGGCCTGGCGGAC
CCTCGTGTTCTGGCCTTGGCGCTGATCTATTTCGGCACCTCCGCCGGCCTTTACACCCTGGGAATCTGGGCGCCGCAGAT
CATCAAGCAGCTTGGCGTATCCTCCATGACGGTGGGTTGGCTCAACATGATCCCGCCGACGGCATCGGTCATCGCCATGG
TTCTGTGGGCGCGCCATTCCGACCGCACCAGCGAGCGGACCTGGCATGTGGTCGGCGCCTGTCTGGTGGCCTCCGCCGGT
CTGGTCTTCGCTGGCAATGCCGACGGCGTCTTCACTGTCATCCTGGCCCTGACTTTGGTCAATATCGGCATCAGCGCCGC
CAAGCCGCCGCTGTGGAGCATGCCCACCATGTTCCTGTCCGGTTCGGCCGCTGCGGCTGGCATCGCCACCATCAATTCTA
TTGGCAACCTTGGAGGCTTCGCCGGGCCGGCCATGATCGGCTGGATCAAGGATCTGACCGGAAGCTTCATGGGCGGGCTG
TATTTCGTCGCGGCGCTTTTGGCGATCTCGGCGGTGACCACACTGCTGCTTGCCCGTTCGCAAAGGAAGTCAGCGGCGGC
CTCAGCCGCTGCGGCCCAAGCCGCTTCCAACTAA

Upstream 100 bases:

>100_bases
CTATGCGGTTTAATGCCACGCCCTTGCCCGCATACCATGCCTGTCAAGCTCAGGCGCAATATCGCGCGAATTATATAATA
CAGGGTGAGGAGTTCGTCCC

Downstream 100 bases:

>100_bases
CGCCGGCCATCCGAGCCAATGGAGATCGATCATGCGTGAATTCAAGATTGCGGCCATTCCGGCCGATGGAATCGGCAAGG
AAGTCGTGGCGGCCGGACTT

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MNTDMEKRVLRRISWRIVPFIMLLYFIAYIDRVNIGFASLTMNKDLGFTSSVFGFGAGIFFFGYFLFEVPSNLILEKVGA
RLWITRVMITWGLISGAMAFVQGSTSFYVLRFLLGAAEAGFFPGIILYLSYWFPARHRAGVTALFMAAAPISTALGSPIS
AALLELHGVMGLAGWQWMFIIEALPALILGVVVFFYMTDRPEKATWMPEDERAWLINAMNEEAASKSGHAKHSIWRGLAD
PRVLALALIYFGTSAGLYTLGIWAPQIIKQLGVSSMTVGWLNMIPPTASVIAMVLWARHSDRTSERTWHVVGACLVASAG
LVFAGNADGVFTVILALTLVNIGISAAKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFAGPAMIGWIKDLTGSFMGGL
YFVAALLAISAVTTLLLARSQRKSAAASAAAAQAASN

Sequences:

>Translated_437_residues
MNTDMEKRVLRRISWRIVPFIMLLYFIAYIDRVNIGFASLTMNKDLGFTSSVFGFGAGIFFFGYFLFEVPSNLILEKVGA
RLWITRVMITWGLISGAMAFVQGSTSFYVLRFLLGAAEAGFFPGIILYLSYWFPARHRAGVTALFMAAAPISTALGSPIS
AALLELHGVMGLAGWQWMFIIEALPALILGVVVFFYMTDRPEKATWMPEDERAWLINAMNEEAASKSGHAKHSIWRGLAD
PRVLALALIYFGTSAGLYTLGIWAPQIIKQLGVSSMTVGWLNMIPPTASVIAMVLWARHSDRTSERTWHVVGACLVASAG
LVFAGNADGVFTVILALTLVNIGISAAKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFAGPAMIGWIKDLTGSFMGGL
YFVAALLAISAVTTLLLARSQRKSAAASAAAAQAASN
>Mature_437_residues
MNTDMEKRVLRRISWRIVPFIMLLYFIAYIDRVNIGFASLTMNKDLGFTSSVFGFGAGIFFFGYFLFEVPSNLILEKVGA
RLWITRVMITWGLISGAMAFVQGSTSFYVLRFLLGAAEAGFFPGIILYLSYWFPARHRAGVTALFMAAAPISTALGSPIS
AALLELHGVMGLAGWQWMFIIEALPALILGVVVFFYMTDRPEKATWMPEDERAWLINAMNEEAASKSGHAKHSIWRGLAD
PRVLALALIYFGTSAGLYTLGIWAPQIIKQLGVSSMTVGWLNMIPPTASVIAMVLWARHSDRTSERTWHVVGACLVASAG
LVFAGNADGVFTVILALTLVNIGISAAKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFAGPAMIGWIKDLTGSFMGGL
YFVAALLAISAVTTLLLARSQRKSAAASAAAAQAASN

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=432, Percent_Identity=38.8888888888889, Blast_Score=277, Evalue=9e-76,
Organism=Escherichia coli, GI1789515, Length=449, Percent_Identity=22.71714922049, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI2367379, Length=423, Percent_Identity=23.8770685579196, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1789152, Length=450, Percent_Identity=24.6666666666667, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI87082320, Length=416, Percent_Identity=20.6730769230769, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI2367193, Length=259, Percent_Identity=22.3938223938224, Blast_Score=62, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6321698, Length=355, Percent_Identity=26.7605633802817, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6322025, Length=233, Percent_Identity=27.4678111587983, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6324410, Length=166, Percent_Identity=27.1084337349398, Blast_Score=87, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6319876, Length=202, Percent_Identity=28.7128712871287, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6319250, Length=320, Percent_Identity=24.375, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322612, Length=247, Percent_Identity=22.2672064777328, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323032, Length=214, Percent_Identity=22.4299065420561, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321502, Length=240, Percent_Identity=23.75, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46975; Mature: 46975

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDMEKRVLRRISWRIVPFIMLLYFIAYIDRVNIGFASLTMNKDLGFTSSVFGFGAGIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
FFGYFLFEVPSNLILEKVGARLWITRVMITWGLISGAMAFVQGSTSFYVLRFLLGAAEAG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
FFPGIILYLSYWFPARHRAGVTALFMAAAPISTALGSPISAALLELHGVMGLAGWQWMFI
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH
IEALPALILGVVVFFYMTDRPEKATWMPEDERAWLINAMNEEAASKSGHAKHSIWRGLAD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCC
PRVLALALIYFGTSAGLYTLGIWAPQIIKQLGVSSMTVGWLNMIPPTASVIAMVLWARHS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHHHHCC
DRTSERTWHVVGACLVASAGLVFAGNADGVFTVILALTLVNIGISAAKPPLWSMPTMFLS
CCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
GSAAAAGIATINSIGNLGGFAGPAMIGWIKDLTGSFMGGLYFVAALLAISAVTTLLLARS
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRKSAAASAAAAQAASN
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTDMEKRVLRRISWRIVPFIMLLYFIAYIDRVNIGFASLTMNKDLGFTSSVFGFGAGIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
FFGYFLFEVPSNLILEKVGARLWITRVMITWGLISGAMAFVQGSTSFYVLRFLLGAAEAG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
FFPGIILYLSYWFPARHRAGVTALFMAAAPISTALGSPISAALLELHGVMGLAGWQWMFI
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHH
IEALPALILGVVVFFYMTDRPEKATWMPEDERAWLINAMNEEAASKSGHAKHSIWRGLAD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCC
PRVLALALIYFGTSAGLYTLGIWAPQIIKQLGVSSMTVGWLNMIPPTASVIAMVLWARHS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHHHHCC
DRTSERTWHVVGACLVASAGLVFAGNADGVFTVILALTLVNIGISAAKPPLWSMPTMFLS
CCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
GSAAAAGIATINSIGNLGGFAGPAMIGWIKDLTGSFMGGLYFVAALLAISAVTTLLLARS
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRKSAAASAAAAQAASN
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]