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The map label for this gene is ttdA [H]

Identifier: 83312278

GI number: 83312278

Start: 3441398

End: 3442297

Strand: Reverse

Name: ttdA [H]

Synonym: amb3179

Alternate gene names: 83312278

Gene position: 3442297-3441398 (Counterclockwise)

Preceding gene: 83312280

Following gene: 83312277

Centisome position: 69.3

GC content: 60.44

Gene sequence:

>900_bases
GTGACAAGTCAAGCGCCCGTCGAGGTCATGACCGACATCATGACCAAGTTCACGTCTTACATCGGGAAGCGACTGCCCAC
CGATATCAAGGAAAAGCTGGCAGATCTTCGGGAGGCAGAGACCAACCCGATGGCCAATGTCTTGTTCGACTCCATGGCTG
AAAACCAGGAGGCAGCCGATAAGCTGAACCGGCCGAGCTGCCAGGATACCGGTGTGATCCAGTATTTCATCACCGCCGGA
GCCAAGTTCCCCTTGCTGGGCGAATTGGAGGACATCCTGCGCAATGCGACCCTGGGCGCAACCAAGTTGGGTCCGCTCCG
TCATAACGCCGTGGAAGCCTTCGACGAGAAAAACACCGGCACCAACACGGGATCACGCATTCCGTGGCTGGATTGGGAGA
TCGTCCCGAACGATGACAGCGTGACCATCGACGTCTACATGGCTGGCGGCGGCTGCACCCTTCCGGGCGCCTCGACAGTG
TTGATGCCGGGCCAGGGATACGAGGGGGTCGTCGATTTCGTCTTCGATGTGGTCACCTCGCGCGGCGTCAACGCCTGTCC
GCCCTTGTTGATCGGAGTTGGTGTCTCGACCTCGGCGGAAACAGCGGCACGCCTGTCGAAGAAGGCAATCCTGCGTCCTG
TGGGCTCCCAGCACGGGAATGCGAATGCCGCCAAGATGGAAACTCTGCTCGAAGACGGTCTGAACGAGCTGGGCATCGGC
CCGCAGGGTCTGACTGGCAACAGCAGCGTGATGGGGGTCAACATCGAGTCCTCAGCTCGCCATCCCTCCACCATCGGCGT
GGCAGTCTCGACCGGCTGCTGGGCTCATCGCCGTGGGCGTATCCGCTTCAATGCGGACCTGTCCTACGAAATCGTCTCGC
ATGAAGGAGTGGTGCTGTGA

Upstream 100 bases:

>100_bases
CATGCGCGATTTATCGCCGCCAGACGACAAGACTACGATCACCTCCAAGATCAAGCGCGGATGTCGCGCCAAGTATCTGA
AATGTTCGAGGAGGTTGAGC

Downstream 100 bases:

>100_bases
AGAAGATCCTGACGACCCCCATCAAGGACGAAGACCTGGCGGACCTCAATGTCGGCGACATCGTCTACCTGACCGGCCGT
CTGGTCACTTGCCGCGACGT

Product: tartrate dehydratase subunit alpha

Products: NA

Alternate protein names: L-TTD alpha [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTSQAPVEVMTDIMTKFTSYIGKRLPTDIKEKLADLREAETNPMANVLFDSMAENQEAADKLNRPSCQDTGVIQYFITAG
AKFPLLGELEDILRNATLGATKLGPLRHNAVEAFDEKNTGTNTGSRIPWLDWEIVPNDDSVTIDVYMAGGGCTLPGASTV
LMPGQGYEGVVDFVFDVVTSRGVNACPPLLIGVGVSTSAETAARLSKKAILRPVGSQHGNANAAKMETLLEDGLNELGIG
PQGLTGNSSVMGVNIESSARHPSTIGVAVSTGCWAHRRGRIRFNADLSYEIVSHEGVVL

Sequences:

>Translated_299_residues
MTSQAPVEVMTDIMTKFTSYIGKRLPTDIKEKLADLREAETNPMANVLFDSMAENQEAADKLNRPSCQDTGVIQYFITAG
AKFPLLGELEDILRNATLGATKLGPLRHNAVEAFDEKNTGTNTGSRIPWLDWEIVPNDDSVTIDVYMAGGGCTLPGASTV
LMPGQGYEGVVDFVFDVVTSRGVNACPPLLIGVGVSTSAETAARLSKKAILRPVGSQHGNANAAKMETLLEDGLNELGIG
PQGLTGNSSVMGVNIESSARHPSTIGVAVSTGCWAHRRGRIRFNADLSYEIVSHEGVVL
>Mature_298_residues
TSQAPVEVMTDIMTKFTSYIGKRLPTDIKEKLADLREAETNPMANVLFDSMAENQEAADKLNRPSCQDTGVIQYFITAGA
KFPLLGELEDILRNATLGATKLGPLRHNAVEAFDEKNTGTNTGSRIPWLDWEIVPNDDSVTIDVYMAGGGCTLPGASTVL
MPGQGYEGVVDFVFDVVTSRGVNACPPLLIGVGVSTSAETAARLSKKAILRPVGSQHGNANAAKMETLLEDGLNELGIGP
QGLTGNSSVMGVNIESSARHPSTIGVAVSTGCWAHRRGRIRFNADLSYEIVSHEGVVL

Specific function: Unknown

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789442, Length=291, Percent_Identity=61.1683848797251, Blast_Score=377, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004646 [H]

Pfam domain/function: PF05681 Fumerase [H]

EC number: =4.2.1.32 [H]

Molecular weight: Translated: 31848; Mature: 31717

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQAPVEVMTDIMTKFTSYIGKRLPTDIKEKLADLREAETNPMANVLFDSMAENQEAAD
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH
KLNRPSCQDTGVIQYFITAGAKFPLLGELEDILRNATLGATKLGPLRHNAVEAFDEKNTG
HCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
TNTGSRIPWLDWEIVPNDDSVTIDVYMAGGGCTLPGASTVLMPGQGYEGVVDFVFDVVTS
CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
RGVNACPPLLIGVGVSTSAETAARLSKKAILRPVGSQHGNANAAKMETLLEDGLNELGIG
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHCCC
PQGLTGNSSVMGVNIESSARHPSTIGVAVSTGCWAHRRGRIRFNADLSYEIVSHEGVVL
CCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCHHHCCCCEEECCCCEEEEECCCCCCC
>Mature Secondary Structure 
TSQAPVEVMTDIMTKFTSYIGKRLPTDIKEKLADLREAETNPMANVLFDSMAENQEAAD
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH
KLNRPSCQDTGVIQYFITAGAKFPLLGELEDILRNATLGATKLGPLRHNAVEAFDEKNTG
HCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
TNTGSRIPWLDWEIVPNDDSVTIDVYMAGGGCTLPGASTVLMPGQGYEGVVDFVFDVVTS
CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
RGVNACPPLLIGVGVSTSAETAARLSKKAILRPVGSQHGNANAAKMETLLEDGLNELGIG
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHCCC
PQGLTGNSSVMGVNIESSARHPSTIGVAVSTGCWAHRRGRIRFNADLSYEIVSHEGVVL
CCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCHHHCCCCEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]