| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yaiI [C]
Identifier: 83311937
GI number: 83311937
Start: 3036582
End: 3037037
Strand: Reverse
Name: yaiI [C]
Synonym: amb2838
Alternate gene names: 83311937
Gene position: 3037037-3036582 (Counterclockwise)
Preceding gene: 83311938
Following gene: 162319786
Centisome position: 61.14
GC content: 64.25
Gene sequence:
>456_bases GTGACCAAAATTTATATCGACGGCGACGCCTGTCCGGTGAAGGACGAGGTGTTCAAGGTGGCTGGGCGCTATGGTCTGGC CGTCACCGTGGTGGGGAATGCCTGGCTGCGGCTGCCCCAGGACCCCATGATCACCATGATCGTGGTGCCTGAAGGTCCCG ACGCCGCCGACGACCGCATCGCCGAACTGATCGAGCCCGGTGACATCTGCATCACCAACGATATCCCACTGGGCTCGCGC TGCCTGATCAAGCGAGCCCTGGTCCTGCGCCCCAACGGCAAGCCCATGACCGAGAATTCCATCGGCGACGCCCTGGCCAC CCGGGACCTGATGAACACGCTCCGCGAAATTGGCACCATGACCGGCGGTCCGCCGCCCTTCGCCAAGGCCGACCGTTCGC GCTTTCTCTCGGCGCTGGACACCATGGTGCATCAGGCGAAGCGGGTTGTTCCCTAG
Upstream 100 bases:
>100_bases TGCCCGCCGACAATCCGGCCTTTACCCTGGAGGGCGACCGTTCCTTCGACCGCCTCGCCAAGGCCCTGGAATGCGAGGCC CTGACCTTCCGGCGGGTGAA
Downstream 100 bases:
>100_bases GGTCTCGCGCCCTTAATCCGAGCTAAGCGGGGCTGCCGCCCCGACCCTGCTTGGAGGCGATGCCTCCAAACCTCTCTTTT ATTCATCAATAAATTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTKIYIDGDACPVKDEVFKVAGRYGLAVTVVGNAWLRLPQDPMITMIVVPEGPDAADDRIAELIEPGDICITNDIPLGSR CLIKRALVLRPNGKPMTENSIGDALATRDLMNTLREIGTMTGGPPPFAKADRSRFLSALDTMVHQAKRVVP
Sequences:
>Translated_151_residues MTKIYIDGDACPVKDEVFKVAGRYGLAVTVVGNAWLRLPQDPMITMIVVPEGPDAADDRIAELIEPGDICITNDIPLGSR CLIKRALVLRPNGKPMTENSIGDALATRDLMNTLREIGTMTGGPPPFAKADRSRFLSALDTMVHQAKRVVP >Mature_150_residues TKIYIDGDACPVKDEVFKVAGRYGLAVTVVGNAWLRLPQDPMITMIVVPEGPDAADDRIAELIEPGDICITNDIPLGSRC LIKRALVLRPNGKPMTENSIGDALATRDLMNTLREIGTMTGGPPPFAKADRSRFLSALDTMVHQAKRVVP
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=147, Percent_Identity=36.734693877551, Blast_Score=99, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2838_MAGSA (Q2W3D3)
Other databases:
- EMBL: AP007255 - RefSeq: YP_422201.1 - STRING: Q2W3D3 - GeneID: 3802625 - GenomeReviews: AP007255_GR - KEGG: mag:amb2838 - NMPDR: fig|342108.5.peg.2524 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: Q2W3D3 - BioCyc: MMAG342108:AMB2838-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16370; Mature: 16239
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIYIDGDACPVKDEVFKVAGRYGLAVTVVGNAWLRLPQDPMITMIVVPEGPDAADDRI CCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCHHHHH AELIEPGDICITNDIPLGSRCLIKRALVLRPNGKPMTENSIGDALATRDLMNTLREIGTM HHHCCCCCEEEECCCCCCHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC TGGPPPFAKADRSRFLSALDTMVHQAKRVVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKIYIDGDACPVKDEVFKVAGRYGLAVTVVGNAWLRLPQDPMITMIVVPEGPDAADDRI CEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCHHHHH AELIEPGDICITNDIPLGSRCLIKRALVLRPNGKPMTENSIGDALATRDLMNTLREIGTM HHHCCCCCEEEECCCCCCHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC TGGPPPFAKADRSRFLSALDTMVHQAKRVVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA