| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is lon [H]
Identifier: 83311889
GI number: 83311889
Start: 2977099
End: 2979510
Strand: Reverse
Name: lon [H]
Synonym: amb2790
Alternate gene names: 83311889
Gene position: 2979510-2977099 (Counterclockwise)
Preceding gene: 83311890
Following gene: 83311888
Centisome position: 59.98
GC content: 64.05
Gene sequence:
>2412_bases ATGGTTGATCTTCCTTCTGGCGACGTTTTTCCCGTTCTTCCGCTCAGGGACATCGTCGTCTTCCCCCACATGATCGTCCC GCTGTTCGTCGGCCGGGAAAAGTCGGTGCGCGCCCTGGAAGACGTGATGCGGGAAGACAAGCAGATCCTGCTGGTCGCCC AGAAAAACGCCGCCCAGGACGATCCCACCACCGATGACATCTATTCGGTCGGCACCGTGTCGACCGTGCTGCAGTTGCTG AAGCTGCCCGACGGCACCGTCAAGGTGCTGGTCGAAGGCGGCAAGCGCGCCCGCATCACCGGCTTCACCGAGAACGAGGC CTTCTTCCAGGCCACCGCCGAGGTGGTGGACGAGCGCGAAGGCGACCAGCAGGAGCTGGAAGCGCTGTCGCGTTCGGTGG TCAGCCAGTTCGAGCAGTACATCAAGCTCAACAAGAAGATTCCCCCCGAGGTCCTGGTCTCGGTCAATCAGATCGAGGAT TCGGCCAAGCTGGCCGACACCGTCGCCTCCCATCTGGCCCTCAAGATCGCCGAGAAGCAGGAATTGCTCGAGGTCGAGGT GGTGTCCGAGCGTCTGGAGCGGGTCTATTCCTACATGGAGGGCGAGATCGGCGTCCTGCAGGTGGAAAAGAAGATCCGCA ACCGCGTCAAGCGGCAGATGGAAAAGACCCAGCGCGAGTACTATCTGAACGAGCAGCTGAAGGCCATTCAGAAGGAGCTG GGCGAGGGCGACGACGGCAAGGACGAGACCGCCGAGCTGGAAGAGCGCATCGCCAAGACCAAGCTGACCGTCGAGGCGCG TGAGAAGGCCCTGGCCGAGCTGAAGAAGCTCAAGTCCATGAGCCCCATGTCGGCCGAGGCCACCGTGGTGCGCAACTACC TGGACTGGCTGCTGACCATTCCGTGGAAGAAGCGCACCAAGGTCAAGAAGGACGTCAAGCTGGCCCAGTCGGTGCTGAAT TCCGACCATTACGGCCTGGAGAAGGTCAAGGAACGCATCCTTGAATATCTCGCCGTGCAGATTCGCACCGACAAGGTGCG CGGCCCCATCCTGTGCCTGGTCGGCCCGCCCGGCGTGGGCAAGACCTCGCTCGGCAAGTCCATCGCCAAGGCCACCGGCC GCAATTTCGTGCGCATGAGCCTGGGCGGCGTCCGCGACGAGTCGGAAGTGCGCGGCCACCGCCGCACCTATATCGGCTCC ATGCCCGGCAAGATCGTGCAGGGCATGAAGAAGGCCAAGAGCTCTAACCCGCTGTTCCTGCTCGACGAGATCGACAAGCT GGGCGCCGACTGGCGCGGCGATCCGGCCTCGGCCCTGCTGGAAGTGCTGGACCCCGAGCAGAACGCCACCTTCAACGACC ATTACCTGGAGGTGGATTATGACCTCTCCGACGTGATGTTCGTCACCACCGCCAACACCATGCGCATGCCCCAGCCCCTG CTGGACCGCATGGAGATCATCCGCCTGTCCGGCTACACCGAGGACGAGAAGGTGGAAATCTCCAAGCGCCACCTGCTGCC CAAGGTGATCAAGGCGGCGGGTCTGAGGAAGGGCGAGTGGTCCATCAGCGACGAGGCCCTGCGCCACATCGTGCGCTACT ACACCCGCGAGGCGGGCGTGCGCAACATGGAGCGCGAACTGGCCAACCTGGCCCGCAAGGCGGTCAAGGAGATCGTCTCG ACCTCCAAGACCAAGGTCGCCGTCACGCCGCGCAACCTGGAAAAGTACGCCGGCATCCACCGCTATCGCTTTGGCGAGGT GGAGGAGCAGGACATGGTCGGCGTGGTCACCGGTCTGGCCTGGACCGAGGTGGGCGGCGAACTGCTGACCATCGAGGCGG TCAGCATGCCGGGCAAGGGCACCTTCAGCCACACCGGCAAGCTGGGTGACGTGATGCAGGAATCCGTGCAGGCGGCCCGC TCCTATGTGCGGTCGCGCTCGGTCAGCCTGGGCATCAAGCCGACGGTGTTCGAGAAGCGCGACATCCATGTCCACGTTCC CGAGGGCGCCACCCCCAAGGATGGTCCTTCGGCCGGTGTTGCCATGTGCACCACCATCGTCTCGGTGCTGACCGGCATTC CTGTGCGCAAGGACGTCGCCATGACCGGCGAGATCACCCTGCGCGGCCGGGTGCTGCCCATCGGCGGCCTGAAGGAAAAG CTGCTGGCCGCTCTGCGCGGCGGCATCAAGACCGTTCTCATCCCCAAGGAGAACGAGAAGGATCTGGCCGAGATCCCCGA CAACGTCAAGAAGGGGCTGGACATCATCCCGGTCTCCACCGCTGACGAAGTGCTGCAGCGGGCGCTGGTGCGCATGCCGG TGGCCATCGAGTGGGAGGAGCCCGCCGATGTGGCCGAAGCCAAGCCTGCCAAGGACGGCGAGCCCGTAGCCGGTGGTTTG GTGACGCACTGA
Upstream 100 bases:
>100_bases TTGACGAGGGGCGGAGTCCGCCCCAGCTAGAGCCTGTTAGGGTTACAGTACAAAGACGGGCCGACCCGGTGGGGCGTCCC GCCGGCGTGAATGAGGCAGC
Downstream 100 bases:
>100_bases TACCGATAAGGGTAATTCCCTGGCGGAAACCGGCGGTTCTCGATGGGAGCCGCCGGTTCTGTTTGGGGTGGGTGCGGGGT GTCGTGTGGCGTGGATGCCA
Product: ATP-dependent Lon protease
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MVDLPSGDVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNAAQDDPTTDDIYSVGTVSTVLQLL KLPDGTVKVLVEGGKRARITGFTENEAFFQATAEVVDEREGDQQELEALSRSVVSQFEQYIKLNKKIPPEVLVSVNQIED SAKLADTVASHLALKIAEKQELLEVEVVSERLERVYSYMEGEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKEL GEGDDGKDETAELEERIAKTKLTVEAREKALAELKKLKSMSPMSAEATVVRNYLDWLLTIPWKKRTKVKKDVKLAQSVLN SDHYGLEKVKERILEYLAVQIRTDKVRGPILCLVGPPGVGKTSLGKSIAKATGRNFVRMSLGGVRDESEVRGHRRTYIGS MPGKIVQGMKKAKSSNPLFLLDEIDKLGADWRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVTTANTMRMPQPL LDRMEIIRLSGYTEDEKVEISKRHLLPKVIKAAGLRKGEWSISDEALRHIVRYYTREAGVRNMERELANLARKAVKEIVS TSKTKVAVTPRNLEKYAGIHRYRFGEVEEQDMVGVVTGLAWTEVGGELLTIEAVSMPGKGTFSHTGKLGDVMQESVQAAR SYVRSRSVSLGIKPTVFEKRDIHVHVPEGATPKDGPSAGVAMCTTIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGLKEK LLAALRGGIKTVLIPKENEKDLAEIPDNVKKGLDIIPVSTADEVLQRALVRMPVAIEWEEPADVAEAKPAKDGEPVAGGL VTH
Sequences:
>Translated_803_residues MVDLPSGDVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNAAQDDPTTDDIYSVGTVSTVLQLL KLPDGTVKVLVEGGKRARITGFTENEAFFQATAEVVDEREGDQQELEALSRSVVSQFEQYIKLNKKIPPEVLVSVNQIED SAKLADTVASHLALKIAEKQELLEVEVVSERLERVYSYMEGEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKEL GEGDDGKDETAELEERIAKTKLTVEAREKALAELKKLKSMSPMSAEATVVRNYLDWLLTIPWKKRTKVKKDVKLAQSVLN SDHYGLEKVKERILEYLAVQIRTDKVRGPILCLVGPPGVGKTSLGKSIAKATGRNFVRMSLGGVRDESEVRGHRRTYIGS MPGKIVQGMKKAKSSNPLFLLDEIDKLGADWRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVTTANTMRMPQPL LDRMEIIRLSGYTEDEKVEISKRHLLPKVIKAAGLRKGEWSISDEALRHIVRYYTREAGVRNMERELANLARKAVKEIVS TSKTKVAVTPRNLEKYAGIHRYRFGEVEEQDMVGVVTGLAWTEVGGELLTIEAVSMPGKGTFSHTGKLGDVMQESVQAAR SYVRSRSVSLGIKPTVFEKRDIHVHVPEGATPKDGPSAGVAMCTTIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGLKEK LLAALRGGIKTVLIPKENEKDLAEIPDNVKKGLDIIPVSTADEVLQRALVRMPVAIEWEEPADVAEAKPAKDGEPVAGGL VTH >Mature_803_residues MVDLPSGDVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNAAQDDPTTDDIYSVGTVSTVLQLL KLPDGTVKVLVEGGKRARITGFTENEAFFQATAEVVDEREGDQQELEALSRSVVSQFEQYIKLNKKIPPEVLVSVNQIED SAKLADTVASHLALKIAEKQELLEVEVVSERLERVYSYMEGEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKEL GEGDDGKDETAELEERIAKTKLTVEAREKALAELKKLKSMSPMSAEATVVRNYLDWLLTIPWKKRTKVKKDVKLAQSVLN SDHYGLEKVKERILEYLAVQIRTDKVRGPILCLVGPPGVGKTSLGKSIAKATGRNFVRMSLGGVRDESEVRGHRRTYIGS MPGKIVQGMKKAKSSNPLFLLDEIDKLGADWRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVTTANTMRMPQPL LDRMEIIRLSGYTEDEKVEISKRHLLPKVIKAAGLRKGEWSISDEALRHIVRYYTREAGVRNMERELANLARKAVKEIVS TSKTKVAVTPRNLEKYAGIHRYRFGEVEEQDMVGVVTGLAWTEVGGELLTIEAVSMPGKGTFSHTGKLGDVMQESVQAAR SYVRSRSVSLGIKPTVFEKRDIHVHVPEGATPKDGPSAGVAMCTTIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGLKEK LLAALRGGIKTVLIPKENEKDLAEIPDNVKKGLDIIPVSTADEVLQRALVRMPVAIEWEEPADVAEAKPAKDGEPVAGGL VTH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=830, Percent_Identity=36.9879518072289, Blast_Score=518, Evalue=1e-146, Organism=Homo sapiens, GI31377667, Length=563, Percent_Identity=44.9378330373002, Blast_Score=496, Evalue=1e-140, Organism=Escherichia coli, GI1786643, Length=769, Percent_Identity=65.9297789336801, Blast_Score=1047, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=707, Percent_Identity=40.02828854314, Blast_Score=499, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17556486, Length=738, Percent_Identity=34.8238482384824, Blast_Score=438, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6319449, Length=740, Percent_Identity=39.7297297297297, Blast_Score=523, Evalue=1e-149, Organism=Drosophila melanogaster, GI24666867, Length=663, Percent_Identity=42.0814479638009, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI221513036, Length=663, Percent_Identity=42.0814479638009, Blast_Score=521, Evalue=1e-148,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 89149; Mature: 89149
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLPSGDVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNAAQD CCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC DPTTDDIYSVGTVSTVLQLLKLPDGTVKVLVEGGKRARITGFTENEAFFQATAEVVDERE CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCC GDQQELEALSRSVVSQFEQYIKLNKKIPPEVLVSVNQIEDSAKLADTVASHLALKIAEKQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLEVEVVSERLERVYSYMEGEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKEL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEGDDGKDETAELEERIAKTKLTVEAREKALAELKKLKSMSPMSAEATVVRNYLDWLLTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEC PWKKRTKVKKDVKLAQSVLNSDHYGLEKVKERILEYLAVQIRTDKVRGPILCLVGPPGVG CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCC KTSLGKSIAKATGRNFVRMSLGGVRDESEVRGHRRTYIGSMPGKIVQGMKKAKSSNPLFL HHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCCEEE LDEIDKLGADWRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVTTANTMRMPQPL EECHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHH LDRMEIIRLSGYTEDEKVEISKRHLLPKVIKAAGLRKGEWSISDEALRHIVRYYTREAGV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH RNMERELANLARKAVKEIVSTSKTKVAVTPRNLEKYAGIHRYRFGEVEEQDMVGVVTGLA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHH WTEVGGELLTIEAVSMPGKGTFSHTGKLGDVMQESVQAARSYVRSRSVSLGIKPTVFEKR HHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC DIHVHVPEGATPKDGPSAGVAMCTTIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGLKEK CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEEECCCHHHH LLAALRGGIKTVLIPKENEKDLAEIPDNVKKGLDIIPVSTADEVLQRALVRMPVAIEWEE HHHHHHCCCEEEEECCCCCCHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHCCCEEECCC PADVAEAKPAKDGEPVAGGLVTH CCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVDLPSGDVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNAAQD CCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC DPTTDDIYSVGTVSTVLQLLKLPDGTVKVLVEGGKRARITGFTENEAFFQATAEVVDERE CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCC GDQQELEALSRSVVSQFEQYIKLNKKIPPEVLVSVNQIEDSAKLADTVASHLALKIAEKQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLEVEVVSERLERVYSYMEGEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKEL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEGDDGKDETAELEERIAKTKLTVEAREKALAELKKLKSMSPMSAEATVVRNYLDWLLTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEC PWKKRTKVKKDVKLAQSVLNSDHYGLEKVKERILEYLAVQIRTDKVRGPILCLVGPPGVG CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCC KTSLGKSIAKATGRNFVRMSLGGVRDESEVRGHRRTYIGSMPGKIVQGMKKAKSSNPLFL HHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCCEEE LDEIDKLGADWRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVTTANTMRMPQPL EECHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHH LDRMEIIRLSGYTEDEKVEISKRHLLPKVIKAAGLRKGEWSISDEALRHIVRYYTREAGV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH RNMERELANLARKAVKEIVSTSKTKVAVTPRNLEKYAGIHRYRFGEVEEQDMVGVVTGLA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHH WTEVGGELLTIEAVSMPGKGTFSHTGKLGDVMQESVQAARSYVRSRSVSLGIKPTVFEKR HHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC DIHVHVPEGATPKDGPSAGVAMCTTIVSVLTGIPVRKDVAMTGEITLRGRVLPIGGLKEK CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEEECCCHHHH LLAALRGGIKTVLIPKENEKDLAEIPDNVKKGLDIIPVSTADEVLQRALVRMPVAIEWEE HHHHHHCCCEEEEECCCCCCHHHHCCHHHHCCCEEEECCCHHHHHHHHHHHCCCEEECCC PADVAEAKPAKDGEPVAGGLVTH CCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8655539 [H]