| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yhiD [H]
Identifier: 83311855
GI number: 83311855
Start: 2942445
End: 2943155
Strand: Reverse
Name: yhiD [H]
Synonym: amb2756
Alternate gene names: 83311855
Gene position: 2943155-2942445 (Counterclockwise)
Preceding gene: 83311856
Following gene: 83311851
Centisome position: 59.25
GC content: 65.68
Gene sequence:
>711_bases ATGGTCATGGAGGGACGGATGAACCCGCAGCATCTGGAAATCGCTCTCCATCTGGGCAGCGCCTGGGCCGCCGGCAGCCT GGTGGGGGCGGAGCGCAGCTTTCACGGCCGTCCCGCCGGATTTCGCACCCACGCCCTGGTCTGCGTCGCCTCCGCCTTGC TGATGCTGGTGACCGTCTACCAATGGGAATGGCTGGGCGTGGTGCCCCTGGAGACGGTGCGCACCGATCCCACCCGCATG GCCCAGGGCATCATGACCGGCATCGGCTTCCTGGGGGCTGGGGTGATCTTCAAGGAAGGGCTGACGGTGCGTGGCCTGAC CACCGCCGCCTCCATCTGGATGACCGCCGCCTTGGGAATTCTGTTCGGGATCGGGTTCTACTATCCGGCGTTGCTGGCTA CGGGAGTGACGGTGGCGACCCTGGCGCTGTTCCGCATGGTGGAATACCGCATGCCGTCGCAGTTCTACGCCCACCACCTG CTGCGCTTTGCCCGCGACAGGGCCATGCCCGAGGGTGAATTGCGCGGCCTGATCCAAGGCCACGGCTTCACCATCTCCAA CATGAGTTACCGCCTGTGCGAGGGCGGCGACGTGTTCGAATACAAAATGGTGATCCGCACCGCCGACCGCGACAACGTCG AACGGCTGGTGGAAGGATTGCGCGGGCTGGCCGACGTGCTGGAGTTCCGGGTCTCGCCCACCGGGGATTGA
Upstream 100 bases:
>100_bases CGCCTTCCCGATTTACGGAGATGGCGTTTCGACATCCAACCGATATCGCTTTTGGCTGATTTATCGGCTGTCATAAAAGT GTAACAATTCGCTCTCCATC
Downstream 100 bases:
>100_bases TTGGAGACCGACGGGCCCCCACCCCGACCCTCCCCCAGCAAAGCCGGGGGAGGGGGAATAGGGTTGGGGAGGGAGCCTTT ACGCCTTGGGCCGCTTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVYQWEWLGVVPLETVRTDPTRM AQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGILFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHL LRFARDRAMPEGELRGLIQGHGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD
Sequences:
>Translated_236_residues MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVYQWEWLGVVPLETVRTDPTRM AQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGILFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHL LRFARDRAMPEGELRGLIQGHGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD >Mature_236_residues MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVYQWEWLGVVPLETVRTDPTRM AQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGILFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHL LRFARDRAMPEGELRGLIQGHGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=137, Percent_Identity=39.4160583941606, Blast_Score=101, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 25940; Mature: 25940
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVY CCCCCCCCHHHEEEEEEECCCHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QWEWLGVVPLETVRTDPTRMAQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGI HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHH LFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHLLRFARDRAMPEGELRGLIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC HGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD CCEEECCCEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVMEGRMNPQHLEIALHLGSAWAAGSLVGAERSFHGRPAGFRTHALVCVASALLMLVTVY CCCCCCCCHHHEEEEEEECCCHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QWEWLGVVPLETVRTDPTRMAQGIMTGIGFLGAGVIFKEGLTVRGLTTAASIWMTAALGI HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHH LFGIGFYYPALLATGVTVATLALFRMVEYRMPSQFYAHHLLRFARDRAMPEGELRGLIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC HGFTISNMSYRLCEGGDVFEYKMVIRTADRDNVERLVEGLRGLADVLEFRVSPTGD CCEEECCCEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]