| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is metG [H]
Identifier: 83311547
GI number: 83311547
Start: 2623962
End: 2625512
Strand: Reverse
Name: metG [H]
Synonym: amb2448
Alternate gene names: 83311547
Gene position: 2625512-2623962 (Counterclockwise)
Preceding gene: 83311548
Following gene: 83311546
Centisome position: 52.86
GC content: 63.96
Gene sequence:
>1551_bases ATGACCGGGGCCGGGACCTTCTACGTCACCACGCCGATCTACTACGTCAATGACAAGCCCCATATCGGCCATGCCTATAC TACGCTGGCCTGCGATGTGCTGGCGCGCTTCAAGCGCCTGGACGGCTTCGACGTCAAGTTCCTGACCGGCACCGACGAGC ATGGTCAGAAGGTGGAGAAGTCGGCGGAAGCCTTCGGCGTCACCCCTCAGGCCCTGGCCGACCAGAATTCCGCCAATTTC CGTGAGCTGGCCAAGATCCTGGGCTGCACCAACGACGATTTCATCCGCACCACCGAGGCTCGCCACAAGGCCGCCTGTCA GGCGCTGTGGGACAAGCTGGTGGCCAAGGGCGACATTTATCTCGGCGCCTATGAGGGCTGGTACTCGGTGCGTGATGAGG CCTTCTACGCCGAGGATGAACTGGTCAAGGGCGCCGACGGCGCCAAGCTGGCCCCCACCGGCGCACCGGTGGAATGGGTG AAGGAACCCAGCTACTTCTTCCGCCTGTCCGCCTGGCAGGACCGCCTGCTCCGGTGGTACGAGGACAATCCCGATTGCGT GGCGCCCCAATCGCGCCGCAACGAGGTGATGAGCTTCGTGAAGGGCGGGCTGCAGGACCTGTCGGTGTCGCGCACCAGCT TCAAATGGGGCATTCCGGTGCCGGGCGACGATGCCCACATCATGTATGTCTGGCTGGACGCCCTGACCAATTACATCACC GCCGTGGGCTATCCCGACACCACCGGCGATTTCGCCCGCTACTGGCCCAACGTCATTCATATGGTGGGCAAGGACATCGT TCGCTTCCACGCCGTCTACTGGCCGGCTTTCCTGATGGCCGCCGACCTGCCGGCGCCCAAGCGGGTCTTCGCCCATGGCT GGTGGACCAACGAGGGCCAGAAGATCTCTAAATCGGTGGGCAACGTCATCGACCCGCTGTCGCTGATCGAGACCTACGGC CTGGATCAGGTGCGCTATTTCCTGCTGCGCGAAGTGCCGTTCGGCAATGACGGCGATTTCAGCCATCGCGCCATGATGGG CCGCATGAACAGCGAGTTGGCCAATGACTATGGCAATCTGGTCCAGCGCTCGCTGTCCATGATCGGCAAGAATTGCGGCG GCGTGACGCCCGCCCATTTGCCCGATACCGACGAGGACAAGGAAATGCTGGGCGCCGCCTATGGCATGCTGGCCAAGGTG CGGGACGCCATGGACCGCCAGCTCTACCACGAAGCCATCGAGGCCATTTGGGTGGTGGTCCGCGCCGCCAATGCCTATGT GGATAAGCAGGCGCCCTGGGCGCTGAAGAAGACCGATCCCGCCCGCATGGGCACGGTGCTCTGGGTTCTGGCCGAGACCA TCCGCTGCCTGGCCCTGCTGACCCAGCCGTTCATGCCGGCGGCCTCGGCCCGCATCCTCGACCAGTTGATGGTGCCCGAG GCCGAGCGGAGCTTCGCCTTCTTCGGCCCCGGTCATGCCCTGAAGGCCGGGATTTCCCTGCCGACGCCCCAGGGCGTGTT CCCGCGCTATGTGGAAGAGGTTTCCGCCTAA
Upstream 100 bases:
>100_bases ACCGCAAGCAGGCCGTTCTCGGCGCCTTCATGGCGGTTGAACGCCTCGCCCGCCAGGGTTCAAGATAGCGGGCAACAACT TGATTTAGCGGAGCATTCCC
Downstream 100 bases:
>100_bases ATGCTGGTCGACAGCCACTGCCACCTGGATTTTCCCGATTTCGCCGACGACCTCGATGGCGTGGTCGGGCGCGCGGGCGC GGCGGGAGTAGGGGTGCTGC
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEKSAEAFGVTPQALADQNSANF RELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIYLGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWV KEPSYFFRLSAWQDRLLRWYEDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYIT AVGYPDTTGDFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEGQKISKSVGNVIDPLSLIETYG LDQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGNLVQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKV RDAMDRQLYHEAIEAIWVVVRAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVPE AERSFAFFGPGHALKAGISLPTPQGVFPRYVEEVSA
Sequences:
>Translated_516_residues MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEKSAEAFGVTPQALADQNSANF RELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIYLGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWV KEPSYFFRLSAWQDRLLRWYEDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYIT AVGYPDTTGDFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEGQKISKSVGNVIDPLSLIETYG LDQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGNLVQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKV RDAMDRQLYHEAIEAIWVVVRAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVPE AERSFAFFGPGHALKAGISLPTPQGVFPRYVEEVSA >Mature_515_residues TGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEKSAEAFGVTPQALADQNSANFR ELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIYLGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWVK EPSYFFRLSAWQDRLLRWYEDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYITA VGYPDTTGDFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEGQKISKSVGNVIDPLSLIETYGL DQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGNLVQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKVR DAMDRQLYHEAIEAIWVVVRAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVPEA ERSFAFFGPGHALKAGISLPTPQGVFPRYVEEVSA
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=506, Percent_Identity=40.3162055335968, Blast_Score=381, Evalue=1e-106, Organism=Homo sapiens, GI14043022, Length=550, Percent_Identity=26.3636363636364, Blast_Score=166, Evalue=7e-41, Organism=Escherichia coli, GI1788432, Length=506, Percent_Identity=25.098814229249, Blast_Score=174, Evalue=1e-44, Organism=Caenorhabditis elegans, GI212645096, Length=516, Percent_Identity=36.6279069767442, Blast_Score=330, Evalue=8e-91, Organism=Caenorhabditis elegans, GI71992781, Length=410, Percent_Identity=34.6341463414634, Blast_Score=240, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17540794, Length=555, Percent_Identity=29.1891891891892, Blast_Score=167, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321610, Length=533, Percent_Identity=33.9587242026266, Blast_Score=314, Evalue=2e-86, Organism=Saccharomyces cerevisiae, GI6321704, Length=517, Percent_Identity=24.3713733075435, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI21358483, Length=544, Percent_Identity=37.6838235294118, Blast_Score=361, Evalue=1e-100, Organism=Drosophila melanogaster, GI24655311, Length=547, Percent_Identity=25.9597806215722, Blast_Score=150, Evalue=3e-36,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 57598; Mature: 57467
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK CCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH SAEAFGVTPQALADQNSANFRELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIY HHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEE LGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWVKEPSYFFRLSAWQDRLLRWY EEEECCCHHHCCCHHCCHHHHHCCCCCCEECCCCCCHHHHCCCCCEEEEHHHHHHHHHHH EDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYIT CCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHH AVGYPDTTGDFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEGQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCH KISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGNL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKVRDAMDRQLYHEAIEAIWVVV HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVPE HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC AERSFAFFGPGHALKAGISLPTPQGVFPRYVEEVSA CCCCEEEECCCHHHHCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure TGAGTFYVTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEK CCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH SAEAFGVTPQALADQNSANFRELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIY HHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEE LGAYEGWYSVRDEAFYAEDELVKGADGAKLAPTGAPVEWVKEPSYFFRLSAWQDRLLRWY EEEECCCHHHCCCHHCCHHHHHCCCCCCEECCCCCCHHHHCCCCCEEEEHHHHHHHHHHH EDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGDDAHIMYVWLDALTNYIT CCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHH AVGYPDTTGDFARYWPNVIHMVGKDIVRFHAVYWPAFLMAADLPAPKRVFAHGWWTNEGQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCH KISKSVGNVIDPLSLIETYGLDQVRYFLLREVPFGNDGDFSHRAMMGRMNSELANDYGNL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VQRSLSMIGKNCGGVTPAHLPDTDEDKEMLGAAYGMLAKVRDAMDRQLYHEAIEAIWVVV HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAANAYVDKQAPWALKKTDPARMGTVLWVLAETIRCLALLTQPFMPAASARILDQLMVPE HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC AERSFAFFGPGHALKAGISLPTPQGVFPRYVEEVSA CCCCEEEECCCHHHHCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]