Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83311426

Identifier: 83311426

GI number: 83311426

Start: 2529832

End: 2531046

Strand: Reverse

Name: 83311426

Synonym: amb2327

Alternate gene names: NA

Gene position: 2531046-2529832 (Counterclockwise)

Preceding gene: 83311427

Following gene: 83311425

Centisome position: 50.96

GC content: 63.79

Gene sequence:

>1215_bases
ATGGTGATGAAGAGGCTTCTGCTCGGCGCCGCGGCGCTGGCCCTGTCCACCGGCATGGCGCATGCCCAGTACAGCGACGG
CAAGGTCAAGATCGGCGTGCTCACCGACCTGTCGGGAACCTATTCCGATCTGGCCGGCAAGGGCACCATCGTCGCGGCCC
AGATGGCCATCGACGATTTCGGCGGCAAGCTCAACGGCCAGCCCATCGAGCTGATCTCCGCCGACCACCAGAACAAGGCC
GACATCGCCTCGGGCATCGCCCGCAAGTGGTACGACACCGAGCAGGTCGACGCCATCGCCGAGCTGGTGACCACCGCGGC
AGCCATCGCGGTGCGCGAGGTCTCCAAGGAGAAGGGCAAGATCGATCTGGTCTCGGGCGCCGCCTCGACGCCGCTGACCA
ACGACAAGTGCTCGGCCACCGGCTTCCACTGGACCTACGACACCTACGCCCTGGCCAACGGCACCGGTGACGCCGTGGTG
AAGAACGGCGGCAAGACCTGGTTCTTCCTGACCGCCGACTATGCCTTCGGCCACAACCTCCAGGCCCAGACCGAGAAGGT
GGTTAAGGCCAATGGCGGCACGGTCAAGGGATCGGTGAAGCATCCCTTCCCCAATTCCGATTTCTCGTCCTTCCTGCTGC
AGGCCCAGTCGTCGGGCGCCCAGATCATCGGTCTGGCCAATGCCGGCGCCGACACCATCAACGCCATCAAGCAGGCCAAG
GAATTCGGCATTACCCAGGCGGGCCAGTCCCTGGCCGGCCTCCTGGTGTTCATCACCGACGTGCATTCGCTCGGCCTGGA
GAACGCCCAGGGCATGATGCTGACCACCGGCTTCTACTGGGACATGGATGACCAGACCCGGGCGTGGTCCAAGCGCTGGT
CCGAGAAGATGGGCGGCGGCAAGATGCCGTCCATGGTTCATGCCGGCACATATTCCCAGGTTCTGCACTACCTGAGGGCC
GCCGCCGCCGCCAAGACCGACGAGGGCATCAAGGTGGCCGACGAGATGCGCAAGCTGCCCATCAACGACTTCTTCGCCAA
GAACGGCAAGATCCGTGCCGATGGCCGCATGGTCCACGACATGTATCTGGCCCAGGTCAAGAAGCCGTCGGAGTCCAAGG
GTCCCTGGGACTATTACAAGATCATCCGCACCATTCCGGGCGACACGGCCTATCAGCCGCTGTCCGAAAGCACTTGCCCG
CTGGTAAAGAAGTAA

Upstream 100 bases:

>100_bases
GCACGGGCAGGTGATCGACATGATCCCCAACGAATCCCTGGCGGCCAACATGGACAAGCTGAAGAGCTATCTCGGCGTTT
AACTAACGGGAGGACCAATC

Downstream 100 bases:

>100_bases
GGAACCGGGTCGGGACGCCGGGGTAATCCGGCGTCCCGTCCTGCTCAGGGGGAGCCCAGACCGCCATGATGACCATTCTC
GGCATACCGACCCAGGCCCT

Product: ABC-type branched-chain amino acid transport systems, periplasmic component

Products: NA

Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; Plasmid Encoded RepA Protein; ABC Transporter Periplasmic Protein; ABC Transporter Subunit

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDFGGKLNGQPIELISADHQNKA
DIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGKIDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVV
KNGGKTWFFLTADYAFGHNLQAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK
EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGGKMPSMVHAGTYSQVLHYLRA
AAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHDMYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCP
LVKK

Sequences:

>Translated_404_residues
MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDFGGKLNGQPIELISADHQNKA
DIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGKIDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVV
KNGGKTWFFLTADYAFGHNLQAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK
EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGGKMPSMVHAGTYSQVLHYLRA
AAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHDMYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCP
LVKK
>Mature_404_residues
MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDFGGKLNGQPIELISADHQNKA
DIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGKIDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVV
KNGGKTWFFLTADYAFGHNLQAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK
EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGGKMPSMVHAGTYSQVLHYLRA
AAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHDMYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCP
LVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43289; Mature: 43289

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDF
CHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHHCCCCEEEEEEEEHHHC
GGKLNGQPIELISADHQNKADIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGK
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVVKNGGKTWFFLTADYAFGHNL
EEEECCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC
QAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK
HHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGG
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC
KMPSMVHAGTYSQVLHYLRAAAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHD
CCCCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCEEEECCCHHHH
MYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCPLVKK
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVMKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAIDDF
CHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHHCCCCEEEEEEEEHHHC
GGKLNGQPIELISADHQNKADIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKGK
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVVKNGGKTWFFLTADYAFGHNL
EEEECCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC
QAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQAK
HHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
EFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTGFYWDMDDQTRAWSKRWSEKMGGG
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCC
KMPSMVHAGTYSQVLHYLRAAAAAKTDEGIKVADEMRKLPINDFFAKNGKIRADGRMVHD
CCCCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCEEEECCCHHHH
MYLAQVKKPSESKGPWDYYKIIRTIPGDTAYQPLSESTCPLVKK
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA